RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 RYR3Q15413 4870 aa10.82□□□□□ -0.68
TRIM3-202ENST00000359518 FAT3Q8TDW7 4589 aa10.79□□□□□ -0.68
TRIM3-202ENST00000359518 ROMO1P60602 79 aa10.76□□□□□ -0.69
TRIM3-202ENST00000359518 KRTAP25-1Q3LHN0 102 aa10.74□□□□□ -0.69
TRIM3-202ENST00000359518 A0A0D9SG42 100 aa10.72□□□□□ -0.69
TRIM3-202ENST00000359518 K7ERS5 55 aa10.71□□□□□ -0.69
TRIM3-202ENST00000359518 KRTAP10-8P60410 259 aa10.69□□□□□ -0.7
TRIM3-202ENST00000359518 TNXBP22105 4242 aa10.68□□□□□ -0.7
TRIM3-202ENST00000359518 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
TRIM3-202ENST00000359518 KRTAP10-6P60371 365 aaPredicted RBP10.65□□□□□ -0.7
TRIM3-202ENST00000359518 KRTAP13-4Q3LI77 160 aa10.65□□□□□ -0.7
TRIM3-202ENST00000359518 P0C880 135 aa10.6□□□□□ -0.71
TRIM3-202ENST00000359518 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
TRIM3-202ENST00000359518 XP32Q5T750 250 aa10.58□□□□□ -0.72
TRIM3-202ENST00000359518 Q5VSD8 79 aa10.57□□□□□ -0.72
TRIM3-202ENST00000359518 S4R3F8 94 aa10.56□□□□□ -0.72
TRIM3-202ENST00000359518 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
TRIM3-202ENST00000359518 LPAP08519 4548 aa10.48□□□□□ -0.73
TRIM3-202ENST00000359518 EPPK1P58107 5090 aaKnown RBP10.47□□□□□ -0.73
TRIM3-202ENST00000359518 KRTAP17-1Q9BYP8 105 aa10.44□□□□□ -0.74
TRIM3-202ENST00000359518 KIAA1109Q2LD37 5005 aa10.43□□□□□ -0.74
TRIM3-202ENST00000359518 LRP2P98164 4655 aa10.39□□□□□ -0.75
TRIM3-202ENST00000359518 SPINT4Q6UDR6 99 aa10.37□□□□□ -0.75
TRIM3-202ENST00000359518 C10orf95Q9H7T3 257 aa10.37□□□□□ -0.75
TRIM3-202ENST00000359518 RYR1P21817 5038 aa10.36□□□□□ -0.75
TRIM3-202ENST00000359518 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
TRIM3-202ENST00000359518 NDUFAF8A1L188 74 aa10.33□□□□□ -0.76
TRIM3-202ENST00000359518 KRTAP12-2P59991 146 aa10.31□□□□□ -0.76
TRIM3-202ENST00000359518 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
TRIM3-202ENST00000359518 KRTAP12-1P59990 96 aa10.16□□□□□ -0.78
TRIM3-202ENST00000359518 ABCA13Q86UQ4 5058 aa10.09□□□□□ -0.79
TRIM3-202ENST00000359518 A0A0A0MQY5 61 aa10.08□□□□□ -0.8
TRIM3-202ENST00000359518 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
TRIM3-202ENST00000359518 M0QZ58 72 aa9.98□□□□□ -0.81
TRIM3-202ENST00000359518 R4GN34 69 aa9.88□□□□□ -0.83
TRIM3-202ENST00000359518 KRTAP15-1Q3LI76 137 aa9.85□□□□□ -0.83
TRIM3-202ENST00000359518 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
TRIM3-202ENST00000359518 HERC2O95714 4834 aa9.78□□□□□ -0.84
TRIM3-202ENST00000359518 BIRC6Q9NR09 4857 aa9.78□□□□□ -0.84
TRIM3-202ENST00000359518 KRTAP4-1Q9BYQ7 146 aa9.7□□□□□ -0.86
TRIM3-202ENST00000359518 MUC17Q685J3 4493 aa9.7□□□□□ -0.86
TRIM3-202ENST00000359518 SEC61BP60468 96 aaKnown RBP9.66□□□□□ -0.86
TRIM3-202ENST00000359518 MUC2Q02817 5179 aa9.62□□□□□ -0.87
TRIM3-202ENST00000359518 J3QL48 77 aa9.61□□□□□ -0.87
TRIM3-202ENST00000359518 PCLOQ9Y6V0 5065 aa9.58□□□□□ -0.88
TRIM3-202ENST00000359518 LUZP6Q538Z0 58 aa9.57□□□□□ -0.88
TRIM3-202ENST00000359518 HERC1Q15751 4861 aa9.45□□□□□ -0.9
TRIM3-202ENST00000359518 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
TRIM3-202ENST00000359518 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
TRIM3-202ENST00000359518 PLAC4Q8WY50 150 aa9.39□□□□□ -0.91
TRIM3-202ENST00000359518 FLGP20930 4061 aaPredicted RBP9.22□□□□□ -0.93
TRIM3-202ENST00000359518 FAT4Q6V0I7 4981 aa9.15□□□□□ -0.94
TRIM3-202ENST00000359518 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
TRIM3-202ENST00000359518 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
TRIM3-202ENST00000359518 TNP1P09430 55 aa8.99□□□□□ -0.97
TRIM3-202ENST00000359518 RNF213Q63HN8 5207 aa8.96□□□□□ -0.98
TRIM3-202ENST00000359518 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
TRIM3-202ENST00000359518 M0R2T5 61 aa8.81□□□□□ -1
TRIM3-202ENST00000359518 LCE2CQ5TA81 110 aa8.8□□□□□ -1
TRIM3-202ENST00000359518 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
TRIM3-202ENST00000359518 SPRR2GQ9BYE4 73 aa8.68□□□□□ -1.02
TRIM3-202ENST00000359518 KRTAP23-1A1A580 65 aa8.64□□□□□ -1.03
TRIM3-202ENST00000359518 KRTAP10-10P60014 251 aa8.59□□□□□ -1.03
TRIM3-202ENST00000359518 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
TRIM3-202ENST00000359518 MT1HP80294 61 aa8.57□□□□□ -1.04
TRIM3-202ENST00000359518 MT1FP04733 61 aa8.54□□□□□ -1.04
TRIM3-202ENST00000359518 SPRR5A0A1B0GTR4 108 aa8.54□□□□□ -1.04
TRIM3-202ENST00000359518 MT2AP02795 61 aa8.5□□□□□ -1.05
TRIM3-202ENST00000359518 KRTAP9-8Q9BYQ0 159 aa8.39□□□□□ -1.07
TRIM3-202ENST00000359518 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
TRIM3-202ENST00000359518 MT1BP07438 61 aa8.24□□□□□ -1.09
TRIM3-202ENST00000359518 MT1XP80297 61 aa8.23□□□□□ -1.09
TRIM3-202ENST00000359518 KRTAP19-8Q3LI54 63 aa8.23□□□□□ -1.09
TRIM3-202ENST00000359518 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.1
TRIM3-202ENST00000359518 KRTAP10-12P60413 245 aa8.13□□□□□ -1.11
TRIM3-202ENST00000359518 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
TRIM3-202ENST00000359518 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
TRIM3-202ENST00000359518 PRO2289Q9P1D8 64 aa8.08□□□□□ -1.12
TRIM3-202ENST00000359518 KRTAP9-3Q9BYQ3 159 aa8□□□□□ -1.13
TRIM3-202ENST00000359518 USH2AO75445 5202 aa7.98□□□□□ -1.13
TRIM3-202ENST00000359518 KMT2DO14686 5537 aa7.93□□□□□ -1.14
TRIM3-202ENST00000359518 LCE2AQ5TA79 106 aaPredicted RBP7.81□□□□□ -1.16
TRIM3-202ENST00000359518 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
TRIM3-202ENST00000359518 LCE2BO14633 110 aa7.75□□□□□ -1.17
TRIM3-202ENST00000359518 INE1O15225 51 aa7.67□□□□□ -1.18
TRIM3-202ENST00000359518 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
TRIM3-202ENST00000359518 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
TRIM3-202ENST00000359518 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
TRIM3-202ENST00000359518 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
TRIM3-202ENST00000359518 KRTAP9-6A8MVA2 160 aa7.46□□□□□ -1.22
TRIM3-202ENST00000359518 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
TRIM3-202ENST00000359518 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
TRIM3-202ENST00000359518 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
TRIM3-202ENST00000359518 MT1LQ93083 61 aa7.11□□□□□ -1.27
TRIM3-202ENST00000359518 MT1EP04732 61 aa7.08□□□□□ -1.28
TRIM3-202ENST00000359518 KRTAP2-3P0C7H8 128 aa7.07□□□□□ -1.28
TRIM3-202ENST00000359518 KRTAP2-4Q9BYR9 128 aa7.07□□□□□ -1.28
TRIM3-202ENST00000359518 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
TRIM3-202ENST00000359518 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
TRIM3-202ENST00000359518 KRTAP4-3Q9BYR4 195 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms