RNA–Protein interactions for RNA: ENST00000358781.6

FAM3D-201, Transcript of family with sequence similarity 3 member D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3D, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-201ENST00000358781 KLKP1Q107X0 134 aa7.78□□□□□ -1.16
FAM3D-201ENST00000358781 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
FAM3D-201ENST00000358781 A8MUN3 132 aa7.75□□□□□ -1.17
FAM3D-201ENST00000358781 SCGB1A1P11684 91 aa7.75□□□□□ -1.17
FAM3D-201ENST00000358781 H3BPC8 53 aa7.73□□□□□ -1.17
FAM3D-201ENST00000358781 K7ERU9 68 aa7.71□□□□□ -1.18
FAM3D-201ENST00000358781 NDUFC1O43677 76 aa7.71□□□□□ -1.18
FAM3D-201ENST00000358781 IMUPQ9GZP8 106 aa7.7□□□□□ -1.18
FAM3D-201ENST00000358781 MT-ATP8P03928 68 aa7.68□□□□□ -1.18
FAM3D-201ENST00000358781 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
FAM3D-201ENST00000358781 MACF1Q9UPN3 7388 aaKnown RBP7.63□□□□□ -1.19
FAM3D-201ENST00000358781 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
FAM3D-201ENST00000358781 H0YAA0 97 aa7.61□□□□□ -1.19
FAM3D-201ENST00000358781 MT1BP07438 61 aa7.6□□□□□ -1.19
FAM3D-201ENST00000358781 Q5VV11 94 aa7.6□□□□□ -1.19
FAM3D-201ENST00000358781 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
FAM3D-201ENST00000358781 SMIM20Q8N5G0 67 aa7.57□□□□□ -1.2
FAM3D-201ENST00000358781 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
FAM3D-201ENST00000358781 TRAV7A0A075B6U4 112 aa7.56□□□□□ -1.2
FAM3D-201ENST00000358781 SYNE2Q8WXH0 6885 aaKnown RBP7.53□□□□□ -1.2
FAM3D-201ENST00000358781 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.2
FAM3D-201ENST00000358781 A6NN06 94 aa7.46□□□□□ -1.22
FAM3D-201ENST00000358781 ACYP2P14621 99 aa7.41□□□□□ -1.22
FAM3D-201ENST00000358781 KRTAP10-5P60370 271 aa7.4□□□□□ -1.22
FAM3D-201ENST00000358781 P0C880 135 aa7.38□□□□□ -1.23
FAM3D-201ENST00000358781 C20orf197Q8N268 126 aa7.38□□□□□ -1.23
FAM3D-201ENST00000358781 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
FAM3D-201ENST00000358781 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
FAM3D-201ENST00000358781 KRTAP3-2Q9BYR7 98 aa7.34□□□□□ -1.23
FAM3D-201ENST00000358781 R4GN34 69 aa7.32□□□□□ -1.24
FAM3D-201ENST00000358781 KRTAP6-3Q3LI67 103 aa7.3□□□□□ -1.24
FAM3D-201ENST00000358781 SPTSSBQ8NFR3 76 aa7.3□□□□□ -1.24
FAM3D-201ENST00000358781 SVIPQ8NHG7 77 aa7.29□□□□□ -1.24
FAM3D-201ENST00000358781 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
FAM3D-201ENST00000358781 M0QZ58 72 aa7.27□□□□□ -1.24
FAM3D-201ENST00000358781 CHKB-CPT1BH3BT56 60 aa7.27□□□□□ -1.25
FAM3D-201ENST00000358781 PCP4P48539 62 aa7.27□□□□□ -1.25
FAM3D-201ENST00000358781 PLAC4Q8WY50 150 aa7.23□□□□□ -1.25
FAM3D-201ENST00000358781 PRO2289Q9P1D8 64 aa7.17□□□□□ -1.26
FAM3D-201ENST00000358781 MT1XP80297 61 aa7.16□□□□□ -1.26
FAM3D-201ENST00000358781 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
FAM3D-201ENST00000358781 COX7CP15954 63 aa7.14□□□□□ -1.27
FAM3D-201ENST00000358781 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
FAM3D-201ENST00000358781 NEBP20929 6669 aa7.09□□□□□ -1.27
FAM3D-201ENST00000358781 COA5Q86WW8 74 aa7.07□□□□□ -1.28
FAM3D-201ENST00000358781 KMT2DO14686 5537 aa7.04□□□□□ -1.28
FAM3D-201ENST00000358781 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.28
FAM3D-201ENST00000358781 H7BZZ5 65 aa7.01□□□□□ -1.29
FAM3D-201ENST00000358781 KRTAP5-9P26371 169 aa7.01□□□□□ -1.29
FAM3D-201ENST00000358781 KRTAP12-2P59991 146 aa6.97□□□□□ -1.29
FAM3D-201ENST00000358781 MDN1Q9NU22 5596 aa6.96□□□□□ -1.3
FAM3D-201ENST00000358781 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
FAM3D-201ENST00000358781 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
FAM3D-201ENST00000358781 SEC61GP60059 68 aa6.89□□□□□ -1.31
FAM3D-201ENST00000358781 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
FAM3D-201ENST00000358781 KRTAP20-1Q3LI63 56 aa6.86□□□□□ -1.31
FAM3D-201ENST00000358781 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
FAM3D-201ENST00000358781 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
FAM3D-201ENST00000358781 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
FAM3D-201ENST00000358781 CCDC179H3BU77 68 aa6.81□□□□□ -1.32
FAM3D-201ENST00000358781 KRTAP10-12P60413 245 aa6.8□□□□□ -1.32
FAM3D-201ENST00000358781 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
FAM3D-201ENST00000358781 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
FAM3D-201ENST00000358781 A0A1B0GU33 70 aa6.76□□□□□ -1.33
FAM3D-201ENST00000358781 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
FAM3D-201ENST00000358781 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
FAM3D-201ENST00000358781 A0A0D9SG42 100 aa6.74□□□□□ -1.33
FAM3D-201ENST00000358781 SPRR2EP22531 72 aa6.71□□□□□ -1.34
FAM3D-201ENST00000358781 SPRR2BP35325 72 aa6.71□□□□□ -1.34
FAM3D-201ENST00000358781 SPRR2AP35326 72 aa6.71□□□□□ -1.34
FAM3D-201ENST00000358781 ATP5EP56381 51 aaPredicted RBP6.71□□□□□ -1.34
FAM3D-201ENST00000358781 A0A1B0GU69 56 aa6.7□□□□□ -1.34
FAM3D-201ENST00000358781 LCE1AQ5T7P2 110 aa6.64□□□□□ -1.35
FAM3D-201ENST00000358781 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
FAM3D-201ENST00000358781 KRTAP12-1P59990 96 aa6.62□□□□□ -1.35
FAM3D-201ENST00000358781 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
FAM3D-201ENST00000358781 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
FAM3D-201ENST00000358781 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
FAM3D-201ENST00000358781 TMEM258P61165 79 aa6.56□□□□□ -1.36
FAM3D-201ENST00000358781 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
FAM3D-201ENST00000358781 A8MU10 97 aa6.52□□□□□ -1.37
FAM3D-201ENST00000358781 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
FAM3D-201ENST00000358781 SPRR2DP22532 72 aa6.49□□□□□ -1.37
FAM3D-201ENST00000358781 KRTAP19-7Q3SYF9 63 aa6.39□□□□□ -1.39
FAM3D-201ENST00000358781 KRTAP2-2Q9BYT5 123 aa6.37□□□□□ -1.39
FAM3D-201ENST00000358781 KRTAP2-1Q9BYU5 128 aa6.37□□□□□ -1.39
FAM3D-201ENST00000358781 MT1EP04732 61 aa6.33□□□□□ -1.4
FAM3D-201ENST00000358781 UQCR11O14957 56 aa6.32□□□□□ -1.4
FAM3D-201ENST00000358781 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
FAM3D-201ENST00000358781 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
FAM3D-201ENST00000358781 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
FAM3D-201ENST00000358781 TNP1P09430 55 aa6.26□□□□□ -1.41
FAM3D-201ENST00000358781 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
FAM3D-201ENST00000358781 LCE5AQ5TCM9 118 aa6.25□□□□□ -1.41
FAM3D-201ENST00000358781 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
FAM3D-201ENST00000358781 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
FAM3D-201ENST00000358781 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
FAM3D-201ENST00000358781 V9GYY9 64 aa6.19□□□□□ -1.42
FAM3D-201ENST00000358781 Q1T7F1 81 aa6.16□□□□□ -1.42
FAM3D-201ENST00000358781 PSPHP1O15172 72 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms