RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 CSAG1Q6PB30 78 aa11.51□□□□□ -0.57
ALKAL1-201ENST00000358543 SERP2Q8N6R1 65 aa11.5□□□□□ -0.57
ALKAL1-201ENST00000358543 KRTAP10-10P60014 251 aa11.49□□□□□ -0.57
ALKAL1-201ENST00000358543 DMAC1Q96GE9 116 aa11.4□□□□□ -0.58
ALKAL1-201ENST00000358543 KRTAP9-3Q9BYQ3 159 aa11.38□□□□□ -0.59
ALKAL1-201ENST00000358543 SNURFQ9Y675 71 aa11.38□□□□□ -0.59
ALKAL1-201ENST00000358543 NDUFC1O43677 76 aa11.36□□□□□ -0.59
ALKAL1-201ENST00000358543 C20orf197Q8N268 126 aa11.36□□□□□ -0.59
ALKAL1-201ENST00000358543 COX7CP15954 63 aa11.29□□□□□ -0.6
ALKAL1-201ENST00000358543 ACYP2P14621 99 aa11.23□□□□□ -0.61
ALKAL1-201ENST00000358543 SPANXA2-OT1Q8N9U9 137 aa11.23□□□□□ -0.61
ALKAL1-201ENST00000358543 FSIP2Q5CZC0 6907 aa11.21□□□□□ -0.62
ALKAL1-201ENST00000358543 H0YAA0 97 aa11.16□□□□□ -0.62
ALKAL1-201ENST00000358543 USH2AO75445 5202 aa11.15□□□□□ -0.62
ALKAL1-201ENST00000358543 CRCT1Q9UGL9 99 aa11.14□□□□□ -0.63
ALKAL1-201ENST00000358543 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
ALKAL1-201ENST00000358543 KRTAP9-6A0A140TA67 174 aa11.12□□□□□ -0.63
ALKAL1-201ENST00000358543 KRTAP19-1Q8IUB9 90 aa11.01□□□□□ -0.65
ALKAL1-201ENST00000358543 CRIPTQ9P021 101 aa11.01□□□□□ -0.65
ALKAL1-201ENST00000358543 H7BZZ5 65 aa11□□□□□ -0.65
ALKAL1-201ENST00000358543 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
ALKAL1-201ENST00000358543 SPTSSBQ8NFR3 76 aa11□□□□□ -0.65
ALKAL1-201ENST00000358543 CHKB-CPT1BH3BT56 60 aa10.99□□□□□ -0.65
ALKAL1-201ENST00000358543 CYSTM1Q9H1C7 97 aa10.99□□□□□ -0.65
ALKAL1-201ENST00000358543 SPRR2GQ9BYE4 73 aa10.98□□□□□ -0.65
ALKAL1-201ENST00000358543 SSPOA2VEC9 5147 aa10.96□□□□□ -0.66
ALKAL1-201ENST00000358543 CCDC179H3BU77 68 aa10.89□□□□□ -0.67
ALKAL1-201ENST00000358543 COA5Q86WW8 74 aa10.83□□□□□ -0.68
ALKAL1-201ENST00000358543 KRTAP19-8Q3LI54 63 aa10.82□□□□□ -0.68
ALKAL1-201ENST00000358543 P0C880 135 aa10.81□□□□□ -0.68
ALKAL1-201ENST00000358543 Q5VV11 94 aa10.75□□□□□ -0.69
ALKAL1-201ENST00000358543 KRTAP19-6Q3LI70 58 aa10.74□□□□□ -0.69
ALKAL1-201ENST00000358543 MT1BP07438 61 aa10.72□□□□□ -0.69
ALKAL1-201ENST00000358543 KRTAP4-8Q9BYQ9 185 aa10.72□□□□□ -0.69
ALKAL1-201ENST00000358543 R4GN34 69 aa10.69□□□□□ -0.7
ALKAL1-201ENST00000358543 ATP5EP56381 51 aaPredicted RBP10.64□□□□□ -0.71
ALKAL1-201ENST00000358543 FCGBPQ9Y6R7 5405 aaPredicted RBP10.61□□□□□ -0.71
ALKAL1-201ENST00000358543 M0QZ58 72 aa10.61□□□□□ -0.71
ALKAL1-201ENST00000358543 TMEM258P61165 79 aa10.54□□□□□ -0.72
ALKAL1-201ENST00000358543 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.53□□□□□ -0.72
ALKAL1-201ENST00000358543 SEC61GP60059 68 aa10.48□□□□□ -0.73
ALKAL1-201ENST00000358543 SERP1Q9Y6X1 66 aa10.44□□□□□ -0.74
ALKAL1-201ENST00000358543 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
ALKAL1-201ENST00000358543 A6NN06 94 aa10.4□□□□□ -0.74
ALKAL1-201ENST00000358543 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
ALKAL1-201ENST00000358543 KRTAP10-5P60370 271 aa10.39□□□□□ -0.75
ALKAL1-201ENST00000358543 KRTAP13-4Q3LI77 160 aa10.3□□□□□ -0.76
ALKAL1-201ENST00000358543 A0A1B0GU69 56 aa10.28□□□□□ -0.76
ALKAL1-201ENST00000358543 A0A1B0GU33 70 aa10.25□□□□□ -0.77
ALKAL1-201ENST00000358543 MACF1Q9UPN3 7388 aaKnown RBP10.22□□□□□ -0.77
ALKAL1-201ENST00000358543 PRO2289Q9P1D8 64 aa10.21□□□□□ -0.77
ALKAL1-201ENST00000358543 LCE3BQ5TA77 95 aa10.2□□□□□ -0.78
ALKAL1-201ENST00000358543 MT1XP80297 61 aa10.18□□□□□ -0.78
ALKAL1-201ENST00000358543 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
ALKAL1-201ENST00000358543 PCP4P48539 62 aa10.15□□□□□ -0.78
ALKAL1-201ENST00000358543 PRR15LQ9BU68 103 aa10.14□□□□□ -0.79
ALKAL1-201ENST00000358543 SPATA8Q6RVD6 105 aa10.12□□□□□ -0.79
ALKAL1-201ENST00000358543 KRTAP4-12Q9BQ66 201 aa10.08□□□□□ -0.8
ALKAL1-201ENST00000358543 KRTAP9-7A8MTY7 169 aa10.06□□□□□ -0.8
ALKAL1-201ENST00000358543 SYNE2Q8WXH0 6885 aaKnown RBP10.03□□□□□ -0.8
ALKAL1-201ENST00000358543 A0A0D9SG42 100 aa10.02□□□□□ -0.81
ALKAL1-201ENST00000358543 KRTAP9-9Q9BYP9 154 aa9.99□□□□□ -0.81
ALKAL1-201ENST00000358543 KRTAP9-4Q9BYQ2 154 aa9.99□□□□□ -0.81
ALKAL1-201ENST00000358543 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
ALKAL1-201ENST00000358543 KRTAP4-8A0A0G2JLE6 195 aa9.93□□□□□ -0.82
ALKAL1-201ENST00000358543 V9GYY9 64 aa9.9□□□□□ -0.82
ALKAL1-201ENST00000358543 CAMK2N1Q7Z7J9 78 aa9.89□□□□□ -0.83
ALKAL1-201ENST00000358543 KRTAP12-1P59990 96 aa9.87□□□□□ -0.83
ALKAL1-201ENST00000358543 KRTAP12-2P59991 146 aa9.87□□□□□ -0.83
ALKAL1-201ENST00000358543 KRTAP6-3Q3LI67 103 aa9.87□□□□□ -0.83
ALKAL1-201ENST00000358543 SPINT4Q6UDR6 99 aa9.86□□□□□ -0.83
ALKAL1-201ENST00000358543 Q1T7F1 81 aa9.85□□□□□ -0.83
ALKAL1-201ENST00000358543 A8MU10 97 aa9.83□□□□□ -0.84
ALKAL1-201ENST00000358543 RPS28P62857 69 aaKnown RBP9.82□□□□□ -0.84
ALKAL1-201ENST00000358543 UQCR11O14957 56 aa9.81□□□□□ -0.84
ALKAL1-201ENST00000358543 KRTAP10-7P60409 375 aaPredicted RBP9.71□□□□□ -0.86
ALKAL1-201ENST00000358543 PSPHP1O15172 72 aa9.7□□□□□ -0.86
ALKAL1-201ENST00000358543 KRTAP10-12P60413 245 aa9.7□□□□□ -0.86
ALKAL1-201ENST00000358543 KMT2DO14686 5537 aa9.7□□□□□ -0.86
ALKAL1-201ENST00000358543 KRTAP5-9P26371 169 aa9.64□□□□□ -0.87
ALKAL1-201ENST00000358543 KRTAP4-7Q9BYR0 210 aa9.63□□□□□ -0.87
ALKAL1-201ENST00000358543 MIR22HGQ0VDD5 57 aa9.62□□□□□ -0.87
ALKAL1-201ENST00000358543 KRTAP8-1Q8IUC2 63 aa9.56□□□□□ -0.88
ALKAL1-201ENST00000358543 LCE1DQ5T752 114 aa9.54□□□□□ -0.88
ALKAL1-201ENST00000358543 MUC12Q9UKN1 5478 aa9.5□□□□□ -0.89
ALKAL1-201ENST00000358543 SPRR2FQ96RM1 72 aa9.42□□□□□ -0.9
ALKAL1-201ENST00000358543 A6NED7 52 aa9.41□□□□□ -0.9
ALKAL1-201ENST00000358543 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.9
ALKAL1-201ENST00000358543 NEBP20929 6669 aa9.38□□□□□ -0.91
ALKAL1-201ENST00000358543 K7ERS5 55 aa9.36□□□□□ -0.91
ALKAL1-201ENST00000358543 KRTAP4-9Q9BYQ8 210 aa9.31□□□□□ -0.92
ALKAL1-201ENST00000358543 TNP1P09430 55 aa9.29□□□□□ -0.92
ALKAL1-201ENST00000358543 MDN1Q9NU22 5596 aa9.29□□□□□ -0.92
ALKAL1-201ENST00000358543 KRTAP4-2Q9BYR5 136 aa9.21□□□□□ -0.94
ALKAL1-201ENST00000358543 SPRR2EP22531 72 aa9.16□□□□□ -0.94
ALKAL1-201ENST00000358543 SPRR2BP35325 72 aa9.16□□□□□ -0.94
ALKAL1-201ENST00000358543 SPRR2AP35326 72 aa9.16□□□□□ -0.94
ALKAL1-201ENST00000358543 LCE1AQ5T7P2 110 aa9.14□□□□□ -0.95
ALKAL1-201ENST00000358543 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
ALKAL1-201ENST00000358543 KRTAP19-7Q3SYF9 63 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms