RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 A0A1B0GU33 70 aa9.24□□□□□ -0.93
XRCC3-201ENST00000352127 KRTAP10-8P60410 259 aa9.23□□□□□ -0.93
XRCC3-201ENST00000352127 H1FX-AS1Q4G0G2 97 aa9.2□□□□□ -0.94
XRCC3-201ENST00000352127 KIAA1109Q2LD37 5005 aa9.18□□□□□ -0.94
XRCC3-201ENST00000352127 CSAG1Q6PB30 78 aa9.18□□□□□ -0.94
XRCC3-201ENST00000352127 RYR1P21817 5038 aa9.17□□□□□ -0.94
XRCC3-201ENST00000352127 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
XRCC3-201ENST00000352127 XP32Q5T750 250 aa9.14□□□□□ -0.95
XRCC3-201ENST00000352127 RPL37P61927 97 aaKnown RBP9.12□□□□□ -0.95
XRCC3-201ENST00000352127 LPAP08519 4548 aa9.11□□□□□ -0.95
XRCC3-201ENST00000352127 KRTAP3-3Q9BYR6 98 aa9.11□□□□□ -0.95
XRCC3-201ENST00000352127 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
XRCC3-201ENST00000352127 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
XRCC3-201ENST00000352127 MT1HL1P0DM35 61 aa9□□□□□ -0.97
XRCC3-201ENST00000352127 KRTAP13-4Q3LI77 160 aa9□□□□□ -0.97
XRCC3-201ENST00000352127 LRP2P98164 4655 aa9□□□□□ -0.97
XRCC3-201ENST00000352127 CRIPTQ9P021 101 aa8.99□□□□□ -0.97
XRCC3-201ENST00000352127 A0A0D9SG42 100 aa8.97□□□□□ -0.97
XRCC3-201ENST00000352127 S4R3F8 94 aa8.97□□□□□ -0.97
XRCC3-201ENST00000352127 EPPK1P58107 5090 aaKnown RBP8.96□□□□□ -0.98
XRCC3-201ENST00000352127 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
XRCC3-201ENST00000352127 P0C880 135 aa8.92□□□□□ -0.98
XRCC3-201ENST00000352127 ABCA13Q86UQ4 5058 aa8.9□□□□□ -0.98
XRCC3-201ENST00000352127 K7ERS5 55 aa8.84□□□□□ -0.99
XRCC3-201ENST00000352127 KRTAP25-1Q3LHN0 102 aa8.84□□□□□ -0.99
XRCC3-201ENST00000352127 KRTAP4-5Q9BYR2 181 aa8.77□□□□□ -1.01
XRCC3-201ENST00000352127 ROMO1P60602 79 aa8.71□□□□□ -1.02
XRCC3-201ENST00000352127 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
XRCC3-201ENST00000352127 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
XRCC3-201ENST00000352127 SPINT4Q6UDR6 99 aa8.62□□□□□ -1.03
XRCC3-201ENST00000352127 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
XRCC3-201ENST00000352127 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
XRCC3-201ENST00000352127 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
XRCC3-201ENST00000352127 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
XRCC3-201ENST00000352127 M0QZ58 72 aa8.42□□□□□ -1.06
XRCC3-201ENST00000352127 LORP23490 312 aaPredicted RBP8.4□□□□□ -1.06
XRCC3-201ENST00000352127 HERC2O95714 4834 aa8.4□□□□□ -1.06
XRCC3-201ENST00000352127 MUC2Q02817 5179 aa8.4□□□□□ -1.06
XRCC3-201ENST00000352127 SEC61BP60468 96 aaKnown RBP8.35□□□□□ -1.07
XRCC3-201ENST00000352127 J3QL48 77 aa8.34□□□□□ -1.07
XRCC3-201ENST00000352127 R4GN34 69 aa8.34□□□□□ -1.07
XRCC3-201ENST00000352127 KRTAP19-2Q3LHN2 52 aa8.22□□□□□ -1.09
XRCC3-201ENST00000352127 HERC1Q15751 4861 aa8.1□□□□□ -1.11
XRCC3-201ENST00000352127 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
XRCC3-201ENST00000352127 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
XRCC3-201ENST00000352127 BIRC6Q9NR09 4857 aa8.04□□□□□ -1.12
XRCC3-201ENST00000352127 PCLOQ9Y6V0 5065 aa8.04□□□□□ -1.12
XRCC3-201ENST00000352127 FLGP20930 4061 aaPredicted RBP8.02□□□□□ -1.13
XRCC3-201ENST00000352127 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
XRCC3-201ENST00000352127 LUZP6Q538Z0 58 aa7.96□□□□□ -1.13
XRCC3-201ENST00000352127 CAMK2N1Q7Z7J9 78 aa7.94□□□□□ -1.14
XRCC3-201ENST00000352127 HMCN2Q8NDA2 5059 aa7.92□□□□□ -1.14
XRCC3-201ENST00000352127 RNF213Q63HN8 5207 aa7.8□□□□□ -1.16
XRCC3-201ENST00000352127 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
XRCC3-201ENST00000352127 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
XRCC3-201ENST00000352127 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.18
XRCC3-201ENST00000352127 M0R2T5 61 aa7.61□□□□□ -1.19
XRCC3-201ENST00000352127 PP632Q6XCG6 107 aa7.59□□□□□ -1.2
XRCC3-201ENST00000352127 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
XRCC3-201ENST00000352127 TNP1P09430 55 aa7.56□□□□□ -1.2
XRCC3-201ENST00000352127 MT1HP80294 61 aa7.53□□□□□ -1.2
XRCC3-201ENST00000352127 SPRR2GQ9BYE4 73 aa7.5□□□□□ -1.21
XRCC3-201ENST00000352127 MT1FP04733 61 aa7.46□□□□□ -1.22
XRCC3-201ENST00000352127 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
XRCC3-201ENST00000352127 MT2AP02795 61 aa7.42□□□□□ -1.22
XRCC3-201ENST00000352127 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
XRCC3-201ENST00000352127 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
XRCC3-201ENST00000352127 KRTAP23-1A1A580 65 aa7.27□□□□□ -1.25
XRCC3-201ENST00000352127 MT1BP07438 61 aa7.17□□□□□ -1.26
XRCC3-201ENST00000352127 KRTAP19-8Q3LI54 63 aa7.15□□□□□ -1.26
XRCC3-201ENST00000352127 SPRR5A0A1B0GTR4 108 aa7.14□□□□□ -1.27
XRCC3-201ENST00000352127 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
XRCC3-201ENST00000352127 MT1XP80297 61 aa7.12□□□□□ -1.27
XRCC3-201ENST00000352127 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
XRCC3-201ENST00000352127 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
XRCC3-201ENST00000352127 USH2AO75445 5202 aa6.99□□□□□ -1.29
XRCC3-201ENST00000352127 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
XRCC3-201ENST00000352127 KRTAP10-12P60413 245 aa6.94□□□□□ -1.3
XRCC3-201ENST00000352127 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
XRCC3-201ENST00000352127 KMT2DO14686 5537 aa6.87□□□□□ -1.31
XRCC3-201ENST00000352127 LCE2BO14633 110 aa6.82□□□□□ -1.32
XRCC3-201ENST00000352127 PRO2289Q9P1D8 64 aa6.78□□□□□ -1.32
XRCC3-201ENST00000352127 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
XRCC3-201ENST00000352127 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
XRCC3-201ENST00000352127 KRTAP4-8Q9BYQ9 185 aa6.63□□□□□ -1.35
XRCC3-201ENST00000352127 LCE2AQ5TA79 106 aaPredicted RBP6.61□□□□□ -1.35
XRCC3-201ENST00000352127 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
XRCC3-201ENST00000352127 FSIP2Q5CZC0 6907 aa6.38□□□□□ -1.39
XRCC3-201ENST00000352127 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
XRCC3-201ENST00000352127 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
XRCC3-201ENST00000352127 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
XRCC3-201ENST00000352127 INE1O15225 51 aa6.33□□□□□ -1.4
XRCC3-201ENST00000352127 SSPOA2VEC9 5147 aa6.32□□□□□ -1.4
XRCC3-201ENST00000352127 MT1LQ93083 61 aa6.14□□□□□ -1.43
XRCC3-201ENST00000352127 MT1EP04732 61 aa6.13□□□□□ -1.43
XRCC3-201ENST00000352127 FCGBPQ9Y6R7 5405 aaPredicted RBP6.07□□□□□ -1.44
XRCC3-201ENST00000352127 MUC12Q9UKN1 5478 aa6.03□□□□□ -1.44
XRCC3-201ENST00000352127 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
XRCC3-201ENST00000352127 KRTAP4-3Q9BYR4 195 aa5.98□□□□□ -1.45
XRCC3-201ENST00000352127 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms