RNA–Protein interactions for RNA: ENST00000351959.9

TNFRSF25-203, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,441 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-203ENST00000351959 KRTAP10-6P60371 365 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF25-203ENST00000351959 LORP23490 312 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF25-203ENST00000351959 CSAG1Q6PB30 78 aa9.64□□□□□ -0.87
TNFRSF25-203ENST00000351959 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
TNFRSF25-203ENST00000351959 KRTAP9-2Q9BYQ4 174 aa9.56□□□□□ -0.88
TNFRSF25-203ENST00000351959 KRTAP9-8Q9BYQ0 159 aa9.54□□□□□ -0.88
TNFRSF25-203ENST00000351959 CHKB-CPT1BH3BT56 60 aa9.49□□□□□ -0.89
TNFRSF25-203ENST00000351959 PCP4P48539 62 aa9.46□□□□□ -0.9
TNFRSF25-203ENST00000351959 MT2AP02795 61 aa9.45□□□□□ -0.9
TNFRSF25-203ENST00000351959 ATP5EP56381 51 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF25-203ENST00000351959 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
TNFRSF25-203ENST00000351959 TMEM258P61165 79 aa9.43□□□□□ -0.9
TNFRSF25-203ENST00000351959 COA5Q86WW8 74 aa9.43□□□□□ -0.9
TNFRSF25-203ENST00000351959 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
TNFRSF25-203ENST00000351959 MT1FP04733 61 aa9.37□□□□□ -0.91
TNFRSF25-203ENST00000351959 H0YAA0 97 aa9.36□□□□□ -0.91
TNFRSF25-203ENST00000351959 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
TNFRSF25-203ENST00000351959 ADM2Q7Z4H4 148 aa9.26□□□□□ -0.93
TNFRSF25-203ENST00000351959 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
TNFRSF25-203ENST00000351959 KRTAP9-3Q9BYQ3 159 aa9.22□□□□□ -0.93
TNFRSF25-203ENST00000351959 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
TNFRSF25-203ENST00000351959 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
TNFRSF25-203ENST00000351959 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
TNFRSF25-203ENST00000351959 P0C880 135 aa9.13□□□□□ -0.95
TNFRSF25-203ENST00000351959 SEC61GP60059 68 aa9.06□□□□□ -0.96
TNFRSF25-203ENST00000351959 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
TNFRSF25-203ENST00000351959 SPRR2GQ9BYE4 73 aa9.04□□□□□ -0.96
TNFRSF25-203ENST00000351959 LCE2BO14633 110 aa9.02□□□□□ -0.97
TNFRSF25-203ENST00000351959 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
TNFRSF25-203ENST00000351959 R4GN34 69 aa8.98□□□□□ -0.97
TNFRSF25-203ENST00000351959 CRCT1Q9UGL9 99 aa8.97□□□□□ -0.97
TNFRSF25-203ENST00000351959 A0A1B0GU69 56 aa8.96□□□□□ -0.98
TNFRSF25-203ENST00000351959 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
TNFRSF25-203ENST00000351959 M0QZ58 72 aa8.93□□□□□ -0.98
TNFRSF25-203ENST00000351959 RPS28P62857 69 aaKnown RBP8.93□□□□□ -0.98
TNFRSF25-203ENST00000351959 KRTAP19-8Q3LI54 63 aa8.88□□□□□ -0.99
TNFRSF25-203ENST00000351959 PRR15LQ9BU68 103 aa8.88□□□□□ -0.99
TNFRSF25-203ENST00000351959 SMIM26A0A096LP01 95 aa8.85□□□□□ -0.99
TNFRSF25-203ENST00000351959 A0A1B0GU33 70 aa8.84□□□□□ -0.99
TNFRSF25-203ENST00000351959 USH2AO75445 5202 aa8.83□□□□□ -1
TNFRSF25-203ENST00000351959 Q5VV11 94 aa8.82□□□□□ -1
TNFRSF25-203ENST00000351959 V9GYY9 64 aa8.82□□□□□ -1
TNFRSF25-203ENST00000351959 Q1T7F1 81 aa8.79□□□□□ -1
TNFRSF25-203ENST00000351959 MT1BP07438 61 aa8.78□□□□□ -1
TNFRSF25-203ENST00000351959 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
TNFRSF25-203ENST00000351959 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
TNFRSF25-203ENST00000351959 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
TNFRSF25-203ENST00000351959 PLAC4Q8WY50 150 aa8.65□□□□□ -1.02
TNFRSF25-203ENST00000351959 PSPHP1O15172 72 aa8.64□□□□□ -1.03
TNFRSF25-203ENST00000351959 A6NN06 94 aa8.63□□□□□ -1.03
TNFRSF25-203ENST00000351959 SSPOA2VEC9 5147 aa8.62□□□□□ -1.03
TNFRSF25-203ENST00000351959 KRTAP19-6Q3LI70 58 aa8.62□□□□□ -1.03
TNFRSF25-203ENST00000351959 UQCR11O14957 56 aa8.61□□□□□ -1.03
TNFRSF25-203ENST00000351959 A0A0D9SG42 100 aa8.57□□□□□ -1.04
TNFRSF25-203ENST00000351959 A8MU10 97 aa8.49□□□□□ -1.05
TNFRSF25-203ENST00000351959 KRTAP10-5P60370 271 aa8.46□□□□□ -1.06
TNFRSF25-203ENST00000351959 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.06
TNFRSF25-203ENST00000351959 SPINT4Q6UDR6 99 aa8.44□□□□□ -1.06
TNFRSF25-203ENST00000351959 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
TNFRSF25-203ENST00000351959 PRO2289Q9P1D8 64 aa8.4□□□□□ -1.06
TNFRSF25-203ENST00000351959 A6NED7 52 aa8.39□□□□□ -1.07
TNFRSF25-203ENST00000351959 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.37□□□□□ -1.07
TNFRSF25-203ENST00000351959 MT1XP80297 61 aa8.37□□□□□ -1.07
TNFRSF25-203ENST00000351959 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
TNFRSF25-203ENST00000351959 FCGBPQ9Y6R7 5405 aaPredicted RBP8.36□□□□□ -1.07
TNFRSF25-203ENST00000351959 CAMK2N1Q7Z7J9 78 aa8.36□□□□□ -1.07
TNFRSF25-203ENST00000351959 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
TNFRSF25-203ENST00000351959 K7ERS5 55 aa8.19□□□□□ -1.1
TNFRSF25-203ENST00000351959 CDC42SE1Q9NRR8 79 aa8.17□□□□□ -1.1
TNFRSF25-203ENST00000351959 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
TNFRSF25-203ENST00000351959 KRTAP10-7P60409 375 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF25-203ENST00000351959 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
TNFRSF25-203ENST00000351959 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
TNFRSF25-203ENST00000351959 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
TNFRSF25-203ENST00000351959 BRK1Q8WUW1 75 aa7.92□□□□□ -1.14
TNFRSF25-203ENST00000351959 TNP1P09430 55 aa7.88□□□□□ -1.15
TNFRSF25-203ENST00000351959 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
TNFRSF25-203ENST00000351959 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
TNFRSF25-203ENST00000351959 KRTAP6-3Q3LI67 103 aa7.78□□□□□ -1.16
TNFRSF25-203ENST00000351959 KRTAP8-1Q8IUC2 63 aa7.78□□□□□ -1.16
TNFRSF25-203ENST00000351959 KMT2DO14686 5537 aa7.76□□□□□ -1.17
TNFRSF25-203ENST00000351959 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
TNFRSF25-203ENST00000351959 ROMO1P60602 79 aa7.74□□□□□ -1.17
TNFRSF25-203ENST00000351959 KRTAP5-9P26371 169 aa7.67□□□□□ -1.18
TNFRSF25-203ENST00000351959 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
TNFRSF25-203ENST00000351959 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
TNFRSF25-203ENST00000351959 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.19
TNFRSF25-203ENST00000351959 NEBP20929 6669 aa7.54□□□□□ -1.2
TNFRSF25-203ENST00000351959 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
TNFRSF25-203ENST00000351959 PMAIP1Q13794 54 aa7.51□□□□□ -1.21
TNFRSF25-203ENST00000351959 PRO0628Q9UI54 55 aa7.5□□□□□ -1.21
TNFRSF25-203ENST00000351959 KRTAP19-7Q3SYF9 63 aa7.48□□□□□ -1.21
TNFRSF25-203ENST00000351959 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.21
TNFRSF25-203ENST00000351959 MUC12Q9UKN1 5478 aa7.39□□□□□ -1.23
TNFRSF25-203ENST00000351959 MT1EP04732 61 aa7.38□□□□□ -1.23
TNFRSF25-203ENST00000351959 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
TNFRSF25-203ENST00000351959 SPRR2EP22531 72 aa7.33□□□□□ -1.24
TNFRSF25-203ENST00000351959 SPRR2BP35325 72 aa7.33□□□□□ -1.24
TNFRSF25-203ENST00000351959 SPRR2AP35326 72 aa7.33□□□□□ -1.24
TNFRSF25-203ENST00000351959 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms