RNA–Protein interactions for RNA: ENST00000349157.10

PUF60-202, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PUF60, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-202ENST00000349157 CDC42SE1Q9NRR8 79 aa10.07□□□□□ -0.8
PUF60-202ENST00000349157 SEC61BP60468 96 aaKnown RBP10.01□□□□□ -0.81
PUF60-202ENST00000349157 UQCR11O14957 56 aa9.98□□□□□ -0.81
PUF60-202ENST00000349157 LCA10Q71F78 164 aa9.96□□□□□ -0.81
PUF60-202ENST00000349157 RBM12B-AS1Q9P1G2 102 aa9.96□□□□□ -0.81
PUF60-202ENST00000349157 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
PUF60-202ENST00000349157 S4R3F8 94 aa9.91□□□□□ -0.82
PUF60-202ENST00000349157 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
PUF60-202ENST00000349157 HERC1Q15751 4861 aa9.86□□□□□ -0.83
PUF60-202ENST00000349157 MIR22HGQ0VDD5 57 aa9.85□□□□□ -0.83
PUF60-202ENST00000349157 KRTAP3-3Q9BYR6 98 aa9.8□□□□□ -0.84
PUF60-202ENST00000349157 A8MU10 97 aa9.79□□□□□ -0.84
PUF60-202ENST00000349157 A0A1B0GU33 70 aa9.77□□□□□ -0.85
PUF60-202ENST00000349157 PMAIP1Q13794 54 aa9.75□□□□□ -0.85
PUF60-202ENST00000349157 LRP2P98164 4655 aa9.7□□□□□ -0.86
PUF60-202ENST00000349157 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
PUF60-202ENST00000349157 A6NN06 94 aa9.62□□□□□ -0.87
PUF60-202ENST00000349157 LPAP08519 4548 aa9.61□□□□□ -0.87
PUF60-202ENST00000349157 H0YAA0 97 aa9.59□□□□□ -0.88
PUF60-202ENST00000349157 KRTAP10-6P60371 365 aaPredicted RBP9.59□□□□□ -0.88
PUF60-202ENST00000349157 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
PUF60-202ENST00000349157 KRTAP3-2Q9BYR7 98 aa9.55□□□□□ -0.88
PUF60-202ENST00000349157 UBR4Q5T4S7 5183 aa9.52□□□□□ -0.89
PUF60-202ENST00000349157 KRTAP4-1Q9BYQ7 146 aa9.52□□□□□ -0.89
PUF60-202ENST00000349157 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
PUF60-202ENST00000349157 ADM2Q7Z4H4 148 aa9.47□□□□□ -0.89
PUF60-202ENST00000349157 K7ERS5 55 aa9.47□□□□□ -0.89
PUF60-202ENST00000349157 M0QZ58 72 aa9.4□□□□□ -0.91
PUF60-202ENST00000349157 P0C880 135 aa9.4□□□□□ -0.91
PUF60-202ENST00000349157 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
PUF60-202ENST00000349157 KRTAP13-4Q3LI77 160 aa9.3□□□□□ -0.92
PUF60-202ENST00000349157 HMCN2Q8NDA2 5059 aa9.28□□□□□ -0.92
PUF60-202ENST00000349157 A0A0D9SG42 100 aa9.18□□□□□ -0.94
PUF60-202ENST00000349157 R4GN34 69 aa9.17□□□□□ -0.94
PUF60-202ENST00000349157 FLGP20930 4061 aaPredicted RBP9.08□□□□□ -0.96
PUF60-202ENST00000349157 CRIPTQ9P021 101 aa9.08□□□□□ -0.96
PUF60-202ENST00000349157 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
PUF60-202ENST00000349157 ROMO1P60602 79 aa9.03□□□□□ -0.96
PUF60-202ENST00000349157 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
PUF60-202ENST00000349157 KRTAP12-2P59991 146 aa9□□□□□ -0.97
PUF60-202ENST00000349157 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
PUF60-202ENST00000349157 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
PUF60-202ENST00000349157 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
PUF60-202ENST00000349157 LORP23490 312 aaPredicted RBP8.9□□□□□ -0.98
PUF60-202ENST00000349157 LINC01554Q52M75 96 aa8.9□□□□□ -0.98
PUF60-202ENST00000349157 MUC2Q02817 5179 aa8.89□□□□□ -0.99
PUF60-202ENST00000349157 M0R2T5 61 aa8.84□□□□□ -0.99
PUF60-202ENST00000349157 MT1HP80294 61 aa8.84□□□□□ -0.99
PUF60-202ENST00000349157 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
PUF60-202ENST00000349157 KRTAP9-2Q9BYQ4 174 aa8.73□□□□□ -1.01
PUF60-202ENST00000349157 SPRR2GQ9BYE4 73 aa8.67□□□□□ -1.02
PUF60-202ENST00000349157 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
PUF60-202ENST00000349157 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
PUF60-202ENST00000349157 MT2AP02795 61 aa8.58□□□□□ -1.04
PUF60-202ENST00000349157 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
PUF60-202ENST00000349157 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
PUF60-202ENST00000349157 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
PUF60-202ENST00000349157 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.04
PUF60-202ENST00000349157 PLAC4Q8WY50 150 aa8.52□□□□□ -1.05
PUF60-202ENST00000349157 C10orf95Q9H7T3 257 aa8.52□□□□□ -1.05
PUF60-202ENST00000349157 MT1FP04733 61 aa8.51□□□□□ -1.05
PUF60-202ENST00000349157 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.07
PUF60-202ENST00000349157 KRTAP19-8Q3LI54 63 aa8.39□□□□□ -1.07
PUF60-202ENST00000349157 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
PUF60-202ENST00000349157 TNP1P09430 55 aa8.31□□□□□ -1.08
PUF60-202ENST00000349157 KRTAP23-1A1A580 65 aa8.29□□□□□ -1.08
PUF60-202ENST00000349157 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
PUF60-202ENST00000349157 MT1BP07438 61 aa8.15□□□□□ -1.1
PUF60-202ENST00000349157 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
PUF60-202ENST00000349157 CRCT1Q9UGL9 99 aa8.15□□□□□ -1.1
PUF60-202ENST00000349157 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
PUF60-202ENST00000349157 PRO2289Q9P1D8 64 aa8.03□□□□□ -1.12
PUF60-202ENST00000349157 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
PUF60-202ENST00000349157 MT1XP80297 61 aa7.97□□□□□ -1.13
PUF60-202ENST00000349157 LCE2BO14633 110 aa7.91□□□□□ -1.14
PUF60-202ENST00000349157 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
PUF60-202ENST00000349157 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
PUF60-202ENST00000349157 KRTAP10-12P60413 245 aa7.74□□□□□ -1.17
PUF60-202ENST00000349157 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
PUF60-202ENST00000349157 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
PUF60-202ENST00000349157 KRTAP10-7P60409 375 aaPredicted RBP7.63□□□□□ -1.19
PUF60-202ENST00000349157 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
PUF60-202ENST00000349157 USH2AO75445 5202 aa7.51□□□□□ -1.21
PUF60-202ENST00000349157 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
PUF60-202ENST00000349157 KRTAP19-6Q3LI70 58 aa7.46□□□□□ -1.21
PUF60-202ENST00000349157 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
PUF60-202ENST00000349157 LUZP6Q538Z0 58 aa7.45□□□□□ -1.22
PUF60-202ENST00000349157 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
PUF60-202ENST00000349157 SSPOA2VEC9 5147 aa7.29□□□□□ -1.24
PUF60-202ENST00000349157 KRTAP19-5Q3LI72 72 aa7.28□□□□□ -1.24
PUF60-202ENST00000349157 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
PUF60-202ENST00000349157 FCGBPQ9Y6R7 5405 aaPredicted RBP7.23□□□□□ -1.25
PUF60-202ENST00000349157 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
PUF60-202ENST00000349157 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
PUF60-202ENST00000349157 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
PUF60-202ENST00000349157 SYNE2Q8WXH0 6885 aaKnown RBP7.1□□□□□ -1.27
PUF60-202ENST00000349157 MACF1Q9UPN3 7388 aaKnown RBP7.08□□□□□ -1.28
PUF60-202ENST00000349157 LCE3CQ5T5A8 94 aa7.04□□□□□ -1.28
PUF60-202ENST00000349157 H3BS24 57 aa7.02□□□□□ -1.29
PUF60-202ENST00000349157 MT1EP04732 61 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms