RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 RYR2Q92736 4967 aa8.55□□□□□ -1.04
MBD1-204ENST00000347968 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
MBD1-204ENST00000347968 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
MBD1-204ENST00000347968 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
MBD1-204ENST00000347968 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
MBD1-204ENST00000347968 FAT1Q14517 4588 aa8.47□□□□□ -1.05
MBD1-204ENST00000347968 KRTAP12-2P59991 146 aa8.41□□□□□ -1.06
MBD1-204ENST00000347968 RYR3Q15413 4870 aa8.41□□□□□ -1.06
MBD1-204ENST00000347968 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
MBD1-204ENST00000347968 S4R3F8 94 aa8.39□□□□□ -1.07
MBD1-204ENST00000347968 LUZP6Q538Z0 58 aa8.37□□□□□ -1.07
MBD1-204ENST00000347968 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
MBD1-204ENST00000347968 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
MBD1-204ENST00000347968 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
MBD1-204ENST00000347968 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
MBD1-204ENST00000347968 KRTAP10-4P60372 401 aaPredicted RBP8.17□□□□□ -1.1
MBD1-204ENST00000347968 HSPG2P98160 4391 aa8.17□□□□□ -1.1
MBD1-204ENST00000347968 LRP1Q07954 4544 aaKnown RBP8.16□□□□□ -1.1
MBD1-204ENST00000347968 XP32Q5T750 250 aa8.15□□□□□ -1.11
MBD1-204ENST00000347968 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
MBD1-204ENST00000347968 PKHD1L1Q86WI1 4243 aa8.13□□□□□ -1.11
MBD1-204ENST00000347968 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
MBD1-204ENST00000347968 EPPK1P58107 5090 aaKnown RBP8.12□□□□□ -1.11
MBD1-204ENST00000347968 RYR1P21817 5038 aa8.09□□□□□ -1.11
MBD1-204ENST00000347968 KRTAP17-1Q9BYP8 105 aa8.08□□□□□ -1.12
MBD1-204ENST00000347968 MYCBP2O75592 4640 aa8.06□□□□□ -1.12
MBD1-204ENST00000347968 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
MBD1-204ENST00000347968 Q5VSD8 79 aa8.04□□□□□ -1.12
MBD1-204ENST00000347968 TNXBP22105 4242 aa7.99□□□□□ -1.13
MBD1-204ENST00000347968 RPS29P62273 56 aaKnown RBP7.98□□□□□ -1.13
MBD1-204ENST00000347968 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
MBD1-204ENST00000347968 LPAP08519 4548 aa7.8□□□□□ -1.16
MBD1-204ENST00000347968 M0QZ58 72 aa7.79□□□□□ -1.16
MBD1-204ENST00000347968 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
MBD1-204ENST00000347968 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
MBD1-204ENST00000347968 MT1HL1P0DM35 61 aa7.72□□□□□ -1.17
MBD1-204ENST00000347968 R4GN34 69 aa7.66□□□□□ -1.18
MBD1-204ENST00000347968 HERC2O95714 4834 aa7.6□□□□□ -1.19
MBD1-204ENST00000347968 LRP2P98164 4655 aa7.58□□□□□ -1.2
MBD1-204ENST00000347968 LORP23490 312 aaPredicted RBP7.58□□□□□ -1.2
MBD1-204ENST00000347968 BIRC6Q9NR09 4857 aa7.52□□□□□ -1.21
MBD1-204ENST00000347968 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
MBD1-204ENST00000347968 J3QL48 77 aa7.43□□□□□ -1.22
MBD1-204ENST00000347968 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
MBD1-204ENST00000347968 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
MBD1-204ENST00000347968 HERC1Q15751 4861 aa7.34□□□□□ -1.23
MBD1-204ENST00000347968 PP632Q6XCG6 107 aa7.32□□□□□ -1.24
MBD1-204ENST00000347968 MUC2Q02817 5179 aa7.25□□□□□ -1.25
MBD1-204ENST00000347968 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
MBD1-204ENST00000347968 MUC17Q685J3 4493 aa7.15□□□□□ -1.26
MBD1-204ENST00000347968 PRO2289Q9P1D8 64 aa7.13□□□□□ -1.27
MBD1-204ENST00000347968 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
MBD1-204ENST00000347968 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
MBD1-204ENST00000347968 TNP1P09430 55 aa7.07□□□□□ -1.28
MBD1-204ENST00000347968 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
MBD1-204ENST00000347968 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
MBD1-204ENST00000347968 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
MBD1-204ENST00000347968 KRTAP19-2Q3LHN2 52 aa6.87□□□□□ -1.31
MBD1-204ENST00000347968 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
MBD1-204ENST00000347968 INE1O15225 51 aa6.78□□□□□ -1.32
MBD1-204ENST00000347968 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
MBD1-204ENST00000347968 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
MBD1-204ENST00000347968 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
MBD1-204ENST00000347968 M0R2T5 61 aa6.57□□□□□ -1.36
MBD1-204ENST00000347968 MT1HP80294 61 aa6.5□□□□□ -1.37
MBD1-204ENST00000347968 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
MBD1-204ENST00000347968 MT1FP04733 61 aa6.32□□□□□ -1.4
MBD1-204ENST00000347968 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
MBD1-204ENST00000347968 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
MBD1-204ENST00000347968 MT2AP02795 61 aa6.31□□□□□ -1.4
MBD1-204ENST00000347968 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
MBD1-204ENST00000347968 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
MBD1-204ENST00000347968 KRTAP9-8Q9BYQ0 159 aa6.28□□□□□ -1.4
MBD1-204ENST00000347968 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
MBD1-204ENST00000347968 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
MBD1-204ENST00000347968 USH2AO75445 5202 aa6.06□□□□□ -1.44
MBD1-204ENST00000347968 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
MBD1-204ENST00000347968 MT1XP80297 61 aa6.03□□□□□ -1.44
MBD1-204ENST00000347968 KMT2DO14686 5537 aa6.03□□□□□ -1.44
MBD1-204ENST00000347968 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
MBD1-204ENST00000347968 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
MBD1-204ENST00000347968 MT1BP07438 61 aa5.99□□□□□ -1.45
MBD1-204ENST00000347968 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.45
MBD1-204ENST00000347968 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
MBD1-204ENST00000347968 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
MBD1-204ENST00000347968 LCE2BO14633 110 aa5.9□□□□□ -1.46
MBD1-204ENST00000347968 KRTAP19-5Q3LI72 72 aa5.89□□□□□ -1.47
MBD1-204ENST00000347968 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
MBD1-204ENST00000347968 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
MBD1-204ENST00000347968 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
MBD1-204ENST00000347968 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
MBD1-204ENST00000347968 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
MBD1-204ENST00000347968 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
MBD1-204ENST00000347968 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
MBD1-204ENST00000347968 SSPOA2VEC9 5147 aa5.64□□□□□ -1.51
MBD1-204ENST00000347968 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
MBD1-204ENST00000347968 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
MBD1-204ENST00000347968 KRTAP19-7Q3SYF9 63 aa5.36□□□□□ -1.55
MBD1-204ENST00000347968 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
MBD1-204ENST00000347968 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms