RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 TPRXLQ17RH7 258 aa9.22□□□□□ -0.93
KRCC1-201ENST00000347055 A0A0D9SG42 100 aa9.2□□□□□ -0.94
KRCC1-201ENST00000347055 DNHD1Q96M86 4753 aa9.18□□□□□ -0.94
KRCC1-201ENST00000347055 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
KRCC1-201ENST00000347055 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
KRCC1-201ENST00000347055 KRTAP21-3Q3LHN1 58 aa9.17□□□□□ -0.94
KRCC1-201ENST00000347055 SPINT4Q6UDR6 99 aa9.17□□□□□ -0.94
KRCC1-201ENST00000347055 XP32Q5T750 250 aa9.14□□□□□ -0.95
KRCC1-201ENST00000347055 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
KRCC1-201ENST00000347055 TNXBP22105 4242 aa9.11□□□□□ -0.95
KRCC1-201ENST00000347055 FAT1Q14517 4588 aa9.09□□□□□ -0.95
KRCC1-201ENST00000347055 M0QZ58 72 aa9.07□□□□□ -0.96
KRCC1-201ENST00000347055 LRP1Q07954 4544 aaKnown RBP9.05□□□□□ -0.96
KRCC1-201ENST00000347055 KRTAP12-2P59991 146 aa9.05□□□□□ -0.96
KRCC1-201ENST00000347055 KRTAP15-1Q3LI76 137 aa9.05□□□□□ -0.96
KRCC1-201ENST00000347055 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
KRCC1-201ENST00000347055 HSPG2P98160 4391 aa9.02□□□□□ -0.97
KRCC1-201ENST00000347055 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
KRCC1-201ENST00000347055 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
KRCC1-201ENST00000347055 Q5VSD8 79 aa8.88□□□□□ -0.99
KRCC1-201ENST00000347055 NDUFAF8A1L188 74 aa8.82□□□□□ -1
KRCC1-201ENST00000347055 RYR2Q92736 4967 aa8.74□□□□□ -1.01
KRCC1-201ENST00000347055 MT1HL1P0DM35 61 aa8.71□□□□□ -1.01
KRCC1-201ENST00000347055 R4GN34 69 aa8.63□□□□□ -1.03
KRCC1-201ENST00000347055 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
KRCC1-201ENST00000347055 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
KRCC1-201ENST00000347055 RYR1P21817 5038 aa8.51□□□□□ -1.05
KRCC1-201ENST00000347055 PP632Q6XCG6 107 aa8.5□□□□□ -1.05
KRCC1-201ENST00000347055 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
KRCC1-201ENST00000347055 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
KRCC1-201ENST00000347055 KMT2CQ8NEZ4 4911 aaKnown RBP8.43□□□□□ -1.06
KRCC1-201ENST00000347055 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
KRCC1-201ENST00000347055 LPAP08519 4548 aa8.35□□□□□ -1.07
KRCC1-201ENST00000347055 LRP2P98164 4655 aa8.33□□□□□ -1.08
KRCC1-201ENST00000347055 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
KRCC1-201ENST00000347055 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
KRCC1-201ENST00000347055 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
KRCC1-201ENST00000347055 CAMK2N1Q7Z7J9 78 aa8.21□□□□□ -1.1
KRCC1-201ENST00000347055 MUC17Q685J3 4493 aa8.2□□□□□ -1.1
KRCC1-201ENST00000347055 RYR3Q15413 4870 aa8.16□□□□□ -1.1
KRCC1-201ENST00000347055 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
KRCC1-201ENST00000347055 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
KRCC1-201ENST00000347055 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
KRCC1-201ENST00000347055 A0A0A0MQY5 61 aa8.09□□□□□ -1.11
KRCC1-201ENST00000347055 TNP1P09430 55 aa8.04□□□□□ -1.12
KRCC1-201ENST00000347055 SPRR5A0A1B0GTR4 108 aa7.99□□□□□ -1.13
KRCC1-201ENST00000347055 ABCA13Q86UQ4 5058 aa7.91□□□□□ -1.14
KRCC1-201ENST00000347055 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
KRCC1-201ENST00000347055 J3QL48 77 aa7.86□□□□□ -1.15
KRCC1-201ENST00000347055 HERC1Q15751 4861 aa7.84□□□□□ -1.15
KRCC1-201ENST00000347055 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
KRCC1-201ENST00000347055 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.17
KRCC1-201ENST00000347055 SPRR2GQ9BYE4 73 aa7.69□□□□□ -1.18
KRCC1-201ENST00000347055 BIRC6Q9NR09 4857 aa7.61□□□□□ -1.19
KRCC1-201ENST00000347055 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
KRCC1-201ENST00000347055 LCE2CQ5TA81 110 aa7.47□□□□□ -1.21
KRCC1-201ENST00000347055 LCE3AQ5TA76 89 aa7.45□□□□□ -1.22
KRCC1-201ENST00000347055 HERC2O95714 4834 aa7.42□□□□□ -1.22
KRCC1-201ENST00000347055 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
KRCC1-201ENST00000347055 INE1O15225 51 aa7.38□□□□□ -1.23
KRCC1-201ENST00000347055 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
KRCC1-201ENST00000347055 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
KRCC1-201ENST00000347055 PCLOQ9Y6V0 5065 aa7.29□□□□□ -1.24
KRCC1-201ENST00000347055 M0R2T5 61 aa7.25□□□□□ -1.25
KRCC1-201ENST00000347055 MUC2Q02817 5179 aa7.24□□□□□ -1.25
KRCC1-201ENST00000347055 MT1HP80294 61 aa7.24□□□□□ -1.25
KRCC1-201ENST00000347055 MT2AP02795 61 aa7.23□□□□□ -1.25
KRCC1-201ENST00000347055 MT1FP04733 61 aa7.2□□□□□ -1.26
KRCC1-201ENST00000347055 KRTAP10-10P60014 251 aa7.2□□□□□ -1.26
KRCC1-201ENST00000347055 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
KRCC1-201ENST00000347055 KRTAP12-3P60328 96 aa7.15□□□□□ -1.27
KRCC1-201ENST00000347055 KRTAP10-5P60370 271 aa7.14□□□□□ -1.27
KRCC1-201ENST00000347055 KRTAP9-8Q9BYQ0 159 aa7.14□□□□□ -1.27
KRCC1-201ENST00000347055 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
KRCC1-201ENST00000347055 MT1XP80297 61 aa7.11□□□□□ -1.27
KRCC1-201ENST00000347055 MT1BP07438 61 aa7.09□□□□□ -1.27
KRCC1-201ENST00000347055 LCE2BO14633 110 aa7.02□□□□□ -1.29
KRCC1-201ENST00000347055 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
KRCC1-201ENST00000347055 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
KRCC1-201ENST00000347055 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
KRCC1-201ENST00000347055 KRTAP9-3Q9BYQ3 159 aa6.84□□□□□ -1.31
KRCC1-201ENST00000347055 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
KRCC1-201ENST00000347055 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
KRCC1-201ENST00000347055 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
KRCC1-201ENST00000347055 KRTAP19-4Q3LI73 84 aa6.67□□□□□ -1.34
KRCC1-201ENST00000347055 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.34
KRCC1-201ENST00000347055 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
KRCC1-201ENST00000347055 KRTAP4-6Q9BYQ5 205 aa6.65□□□□□ -1.34
KRCC1-201ENST00000347055 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
KRCC1-201ENST00000347055 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
KRCC1-201ENST00000347055 KRTAP2-1Q9BYU5 128 aa6.49□□□□□ -1.37
KRCC1-201ENST00000347055 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
KRCC1-201ENST00000347055 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.4
KRCC1-201ENST00000347055 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
KRCC1-201ENST00000347055 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
KRCC1-201ENST00000347055 MT1LQ93083 61 aa6.21□□□□□ -1.42
KRCC1-201ENST00000347055 MT1EP04732 61 aa6.16□□□□□ -1.42
KRCC1-201ENST00000347055 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
KRCC1-201ENST00000347055 KMT2DO14686 5537 aa5.98□□□□□ -1.45
KRCC1-201ENST00000347055 USH2AO75445 5202 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms