RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
APP-201ENST00000346798 FAT3Q8TDW7 4589 aa6.11□□□□□ -1.43
APP-201ENST00000346798 RYR2Q92736 4967 aa6.11□□□□□ -1.43
APP-201ENST00000346798 Q5VSD8 79 aa6.09□□□□□ -1.43
APP-201ENST00000346798 KRTAP13-4Q3LI77 160 aa6.08□□□□□ -1.44
APP-201ENST00000346798 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
APP-201ENST00000346798 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
APP-201ENST00000346798 XP32Q5T750 250 aa6.06□□□□□ -1.44
APP-201ENST00000346798 S4R3F8 94 aa6.06□□□□□ -1.44
APP-201ENST00000346798 RPL37P61927 97 aaKnown RBP6.05□□□□□ -1.44
APP-201ENST00000346798 TNXBP22105 4242 aa6.05□□□□□ -1.44
APP-201ENST00000346798 P0C880 135 aa6.03□□□□□ -1.44
APP-201ENST00000346798 ROMO1P60602 79 aa6.01□□□□□ -1.45
APP-201ENST00000346798 KRTAP3-2Q9BYR7 98 aa6□□□□□ -1.45
APP-201ENST00000346798 H3BS24 57 aa5.98□□□□□ -1.45
APP-201ENST00000346798 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
APP-201ENST00000346798 LPAP08519 4548 aa5.97□□□□□ -1.45
APP-201ENST00000346798 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
APP-201ENST00000346798 KRTAP17-1Q9BYP8 105 aa5.96□□□□□ -1.45
APP-201ENST00000346798 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
APP-201ENST00000346798 SPINT4Q6UDR6 99 aa5.95□□□□□ -1.46
APP-201ENST00000346798 LRP2P98164 4655 aa5.94□□□□□ -1.46
APP-201ENST00000346798 RYR3Q15413 4870 aa5.92□□□□□ -1.46
APP-201ENST00000346798 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
APP-201ENST00000346798 RYR1P21817 5038 aa5.9□□□□□ -1.47
APP-201ENST00000346798 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
APP-201ENST00000346798 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
APP-201ENST00000346798 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
APP-201ENST00000346798 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
APP-201ENST00000346798 M0QZ58 72 aa5.73□□□□□ -1.49
APP-201ENST00000346798 EPPK1P58107 5090 aaKnown RBP5.72□□□□□ -1.49
APP-201ENST00000346798 R4GN34 69 aa5.69□□□□□ -1.5
APP-201ENST00000346798 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
APP-201ENST00000346798 NDUFAF8A1L188 74 aa5.63□□□□□ -1.51
APP-201ENST00000346798 LORP23490 312 aaPredicted RBP5.61□□□□□ -1.51
APP-201ENST00000346798 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
APP-201ENST00000346798 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
APP-201ENST00000346798 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
APP-201ENST00000346798 MUC2Q02817 5179 aa5.54□□□□□ -1.52
APP-201ENST00000346798 J3QL48 77 aa5.53□□□□□ -1.52
APP-201ENST00000346798 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
APP-201ENST00000346798 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.54
APP-201ENST00000346798 HERC2O95714 4834 aa5.44□□□□□ -1.54
APP-201ENST00000346798 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
APP-201ENST00000346798 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
APP-201ENST00000346798 HERC1Q15751 4861 aa5.25□□□□□ -1.57
APP-201ENST00000346798 FAT4Q6V0I7 4981 aa5.25□□□□□ -1.57
APP-201ENST00000346798 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
APP-201ENST00000346798 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
APP-201ENST00000346798 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
APP-201ENST00000346798 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
APP-201ENST00000346798 TNP1P09430 55 aa5.16□□□□□ -1.58
APP-201ENST00000346798 BIRC6Q9NR09 4857 aa5.15□□□□□ -1.58
APP-201ENST00000346798 M0R2T5 61 aa5.13□□□□□ -1.59
APP-201ENST00000346798 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
APP-201ENST00000346798 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
APP-201ENST00000346798 LCE2CQ5TA81 110 aa5□□□□□ -1.61
APP-201ENST00000346798 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
APP-201ENST00000346798 KRTAP19-1Q8IUB9 90 aa4.97□□□□□ -1.61
APP-201ENST00000346798 KRTAP10-10P60014 251 aa4.96□□□□□ -1.61
APP-201ENST00000346798 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
APP-201ENST00000346798 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
APP-201ENST00000346798 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
APP-201ENST00000346798 MT1HP80294 61 aa4.9□□□□□ -1.62
APP-201ENST00000346798 MT1FP04733 61 aa4.89□□□□□ -1.63
APP-201ENST00000346798 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
APP-201ENST00000346798 MT2AP02795 61 aa4.85□□□□□ -1.63
APP-201ENST00000346798 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
APP-201ENST00000346798 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
APP-201ENST00000346798 MT1BP07438 61 aa4.7□□□□□ -1.66
APP-201ENST00000346798 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
APP-201ENST00000346798 MT1XP80297 61 aa4.69□□□□□ -1.66
APP-201ENST00000346798 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
APP-201ENST00000346798 KRTAP19-8Q3LI54 63 aa4.66□□□□□ -1.66
APP-201ENST00000346798 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
APP-201ENST00000346798 KRTAP12-3P60328 96 aa4.65□□□□□ -1.67
APP-201ENST00000346798 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
APP-201ENST00000346798 USH2AO75445 5202 aa4.62□□□□□ -1.67
APP-201ENST00000346798 KMT2DO14686 5537 aa4.58□□□□□ -1.68
APP-201ENST00000346798 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
APP-201ENST00000346798 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
APP-201ENST00000346798 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
APP-201ENST00000346798 LCE2BO14633 110 aa4.43□□□□□ -1.7
APP-201ENST00000346798 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
APP-201ENST00000346798 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
APP-201ENST00000346798 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
APP-201ENST00000346798 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
APP-201ENST00000346798 INE1O15225 51 aa4.32□□□□□ -1.72
APP-201ENST00000346798 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
APP-201ENST00000346798 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
APP-201ENST00000346798 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
APP-201ENST00000346798 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
APP-201ENST00000346798 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
APP-201ENST00000346798 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
APP-201ENST00000346798 MT1LQ93083 61 aa4.05□□□□□ -1.76
APP-201ENST00000346798 MT1EP04732 61 aa4.04□□□□□ -1.76
APP-201ENST00000346798 MUC12Q9UKN1 5478 aa4.01□□□□□ -1.77
APP-201ENST00000346798 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
APP-201ENST00000346798 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
APP-201ENST00000346798 KRTAP2-1Q9BYU5 128 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms