RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
VHL-202ENST00000345392 KIAA1109Q2LD37 5005 aa9.34□□□□□ -0.91
VHL-202ENST00000345392 KRTAP10-4P60372 401 aaPredicted RBP9.34□□□□□ -0.91
VHL-202ENST00000345392 DMBT1Q9UGM3 2413 aaPredicted RBP9.29□□□□□ -0.92
VHL-202ENST00000345392 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
VHL-202ENST00000345392 HSPG2P98160 4391 aa9.25□□□□□ -0.93
VHL-202ENST00000345392 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
VHL-202ENST00000345392 A0A0D9SG42 100 aa9.23□□□□□ -0.93
VHL-202ENST00000345392 KRTAP13-4Q3LI77 160 aa9.22□□□□□ -0.93
VHL-202ENST00000345392 FAT3Q8TDW7 4589 aa9.21□□□□□ -0.93
VHL-202ENST00000345392 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.93
VHL-202ENST00000345392 RYR1P21817 5038 aa9.2□□□□□ -0.94
VHL-202ENST00000345392 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
VHL-202ENST00000345392 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
VHL-202ENST00000345392 TNXBP22105 4242 aa9.16□□□□□ -0.94
VHL-202ENST00000345392 P0C880 135 aa9.15□□□□□ -0.94
VHL-202ENST00000345392 Q5VSD8 79 aa9.13□□□□□ -0.95
VHL-202ENST00000345392 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
VHL-202ENST00000345392 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
VHL-202ENST00000345392 KRTAP4-5Q9BYR2 181 aa9.08□□□□□ -0.96
VHL-202ENST00000345392 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
VHL-202ENST00000345392 BIRC6Q9NR09 4857 aa9.07□□□□□ -0.96
VHL-202ENST00000345392 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
VHL-202ENST00000345392 SPINT4Q6UDR6 99 aa9.02□□□□□ -0.97
VHL-202ENST00000345392 S4R3F8 94 aa9.02□□□□□ -0.97
VHL-202ENST00000345392 LPAP08519 4548 aa8.96□□□□□ -0.97
VHL-202ENST00000345392 KRTAP12-2P59991 146 aa8.94□□□□□ -0.98
VHL-202ENST00000345392 ABCA13Q86UQ4 5058 aa8.92□□□□□ -0.98
VHL-202ENST00000345392 XP32Q5T750 250 aa8.92□□□□□ -0.98
VHL-202ENST00000345392 HERC2O95714 4834 aa8.89□□□□□ -0.99
VHL-202ENST00000345392 LRP2P98164 4655 aa8.82□□□□□ -1
VHL-202ENST00000345392 KRTAP12-1P59990 96 aa8.81□□□□□ -1
VHL-202ENST00000345392 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
VHL-202ENST00000345392 NDUFAF8A1L188 74 aa8.76□□□□□ -1.01
VHL-202ENST00000345392 PCLOQ9Y6V0 5065 aa8.75□□□□□ -1.01
VHL-202ENST00000345392 MT1HL1P0DM35 61 aa8.71□□□□□ -1.01
VHL-202ENST00000345392 J3QL48 77 aa8.63□□□□□ -1.03
VHL-202ENST00000345392 M0QZ58 72 aa8.6□□□□□ -1.03
VHL-202ENST00000345392 HERC1Q15751 4861 aa8.53□□□□□ -1.04
VHL-202ENST00000345392 R4GN34 69 aa8.43□□□□□ -1.06
VHL-202ENST00000345392 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
VHL-202ENST00000345392 MUC17Q685J3 4493 aa8.31□□□□□ -1.08
VHL-202ENST00000345392 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
VHL-202ENST00000345392 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
VHL-202ENST00000345392 MUC2Q02817 5179 aa8.23□□□□□ -1.09
VHL-202ENST00000345392 HMCN2Q8NDA2 5059 aa8.21□□□□□ -1.1
VHL-202ENST00000345392 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
VHL-202ENST00000345392 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
VHL-202ENST00000345392 CAMK2N1Q7Z7J9 78 aa8.06□□□□□ -1.12
VHL-202ENST00000345392 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
VHL-202ENST00000345392 RNF213Q63HN8 5207 aa7.96□□□□□ -1.13
VHL-202ENST00000345392 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
VHL-202ENST00000345392 LUZP6Q538Z0 58 aa7.95□□□□□ -1.14
VHL-202ENST00000345392 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
VHL-202ENST00000345392 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
VHL-202ENST00000345392 TNP1P09430 55 aa7.74□□□□□ -1.17
VHL-202ENST00000345392 A0A0A0MQY5 61 aa7.71□□□□□ -1.17
VHL-202ENST00000345392 SPRR5A0A1B0GTR4 108 aa7.56□□□□□ -1.2
VHL-202ENST00000345392 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
VHL-202ENST00000345392 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
VHL-202ENST00000345392 M0R2T5 61 aa7.42□□□□□ -1.22
VHL-202ENST00000345392 KRTAP19-1Q8IUB9 90 aa7.37□□□□□ -1.23
VHL-202ENST00000345392 MT1HP80294 61 aa7.35□□□□□ -1.23
VHL-202ENST00000345392 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
VHL-202ENST00000345392 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
VHL-202ENST00000345392 MT1FP04733 61 aa7.25□□□□□ -1.25
VHL-202ENST00000345392 KRTAP10-10P60014 251 aa7.24□□□□□ -1.25
VHL-202ENST00000345392 MT2AP02795 61 aa7.2□□□□□ -1.26
VHL-202ENST00000345392 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
VHL-202ENST00000345392 KRTAP9-8Q9BYQ0 159 aa7.13□□□□□ -1.27
VHL-202ENST00000345392 KRTAP8-1Q8IUC2 63 aa7.07□□□□□ -1.28
VHL-202ENST00000345392 PRO2289Q9P1D8 64 aa6.99□□□□□ -1.29
VHL-202ENST00000345392 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
VHL-202ENST00000345392 MT1BP07438 61 aa6.97□□□□□ -1.29
VHL-202ENST00000345392 KRTAP12-3P60328 96 aa6.95□□□□□ -1.3
VHL-202ENST00000345392 MT1XP80297 61 aa6.95□□□□□ -1.3
VHL-202ENST00000345392 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
VHL-202ENST00000345392 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
VHL-202ENST00000345392 INE1O15225 51 aa6.87□□□□□ -1.31
VHL-202ENST00000345392 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
VHL-202ENST00000345392 USH2AO75445 5202 aa6.84□□□□□ -1.31
VHL-202ENST00000345392 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
VHL-202ENST00000345392 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
VHL-202ENST00000345392 KMT2DO14686 5537 aa6.77□□□□□ -1.33
VHL-202ENST00000345392 LCE2BO14633 110 aa6.7□□□□□ -1.34
VHL-202ENST00000345392 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
VHL-202ENST00000345392 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
VHL-202ENST00000345392 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
VHL-202ENST00000345392 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
VHL-202ENST00000345392 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
VHL-202ENST00000345392 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
VHL-202ENST00000345392 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
VHL-202ENST00000345392 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
VHL-202ENST00000345392 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
VHL-202ENST00000345392 CRCT1Q9UGL9 99 aa6.24□□□□□ -1.41
VHL-202ENST00000345392 FCGBPQ9Y6R7 5405 aaPredicted RBP6.23□□□□□ -1.41
VHL-202ENST00000345392 KRTAP19-6Q3LI70 58 aa6.2□□□□□ -1.42
VHL-202ENST00000345392 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
VHL-202ENST00000345392 KRTAP19-7Q3SYF9 63 aa6.2□□□□□ -1.42
VHL-202ENST00000345392 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms