RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 HERC1Q15751 4861 aa4.7□□□□□ -1.66
TRIO-201ENST00000344135 KRTAP3-3Q9BYR6 98 aa4.68□□□□□ -1.66
TRIO-201ENST00000344135 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
TRIO-201ENST00000344135 KRTAP13-3Q3SY46 172 aa4.67□□□□□ -1.66
TRIO-201ENST00000344135 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
TRIO-201ENST00000344135 TP53AIP1Q9HCN2 124 aa4.67□□□□□ -1.66
TRIO-201ENST00000344135 UQCR11O14957 56 aa4.65□□□□□ -1.66
TRIO-201ENST00000344135 NDUFAF8A1L188 74 aa4.64□□□□□ -1.67
TRIO-201ENST00000344135 K7ERS5 55 aa4.64□□□□□ -1.67
TRIO-201ENST00000344135 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
TRIO-201ENST00000344135 IGKV2-30P06310 120 aa4.63□□□□□ -1.67
TRIO-201ENST00000344135 LINC01558Q9Y6Z2 57 aa4.62□□□□□ -1.67
TRIO-201ENST00000344135 IGLV7-46A0A075B6I9 117 aa4.62□□□□□ -1.67
TRIO-201ENST00000344135 ROMO1P60602 79 aa4.62□□□□□ -1.67
TRIO-201ENST00000344135 MUC2Q02817 5179 aa4.61□□□□□ -1.67
TRIO-201ENST00000344135 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
TRIO-201ENST00000344135 SPANXA2-OT1Q8N9U9 137 aa4.59□□□□□ -1.67
TRIO-201ENST00000344135 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
TRIO-201ENST00000344135 A8MUU9 505 aa4.58□□□□□ -1.68
TRIO-201ENST00000344135 H3BPC8 53 aa4.58□□□□□ -1.68
TRIO-201ENST00000344135 ACYP2P14621 99 aa4.57□□□□□ -1.68
TRIO-201ENST00000344135 XP32Q5T750 250 aa4.56□□□□□ -1.68
TRIO-201ENST00000344135 HRES1P13985 223 aa4.55□□□□□ -1.68
TRIO-201ENST00000344135 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
TRIO-201ENST00000344135 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
TRIO-201ENST00000344135 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
TRIO-201ENST00000344135 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
TRIO-201ENST00000344135 RNF213Q63HN8 5207 aa4.44□□□□□ -1.7
TRIO-201ENST00000344135 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
TRIO-201ENST00000344135 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
TRIO-201ENST00000344135 UBR4Q5T4S7 5183 aa4.42□□□□□ -1.7
TRIO-201ENST00000344135 MUC17Q685J3 4493 aa4.4□□□□□ -1.71
TRIO-201ENST00000344135 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
TRIO-201ENST00000344135 KRTAP4-1Q9BYQ7 146 aa4.38□□□□□ -1.71
TRIO-201ENST00000344135 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
TRIO-201ENST00000344135 A0A0D9SG42 100 aa4.37□□□□□ -1.71
TRIO-201ENST00000344135 P0C880 135 aa4.35□□□□□ -1.71
TRIO-201ENST00000344135 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
TRIO-201ENST00000344135 COX6B2Q6YFQ2 88 aa4.34□□□□□ -1.71
TRIO-201ENST00000344135 SEC61BP60468 96 aaKnown RBP4.31□□□□□ -1.72
TRIO-201ENST00000344135 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
TRIO-201ENST00000344135 A0A1B0GU33 70 aa4.28□□□□□ -1.72
TRIO-201ENST00000344135 LCE2BO14633 110 aa4.27□□□□□ -1.73
TRIO-201ENST00000344135 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
TRIO-201ENST00000344135 S4R3F8 94 aa4.22□□□□□ -1.73
TRIO-201ENST00000344135 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.73
TRIO-201ENST00000344135 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
TRIO-201ENST00000344135 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
TRIO-201ENST00000344135 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
TRIO-201ENST00000344135 H0YAA0 97 aa4.09□□□□□ -1.75
TRIO-201ENST00000344135 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
TRIO-201ENST00000344135 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
TRIO-201ENST00000344135 MT1HP80294 61 aa4□□□□□ -1.77
TRIO-201ENST00000344135 M0R2T5 61 aa3.99□□□□□ -1.77
TRIO-201ENST00000344135 CAMK2N1Q7Z7J9 78 aa3.99□□□□□ -1.77
TRIO-201ENST00000344135 KRTAP15-1Q3LI76 137 aa3.95□□□□□ -1.78
TRIO-201ENST00000344135 M0QZ58 72 aa3.94□□□□□ -1.78
TRIO-201ENST00000344135 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
TRIO-201ENST00000344135 R4GN34 69 aa3.92□□□□□ -1.78
TRIO-201ENST00000344135 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
TRIO-201ENST00000344135 MT1FP04733 61 aa3.86□□□□□ -1.79
TRIO-201ENST00000344135 KRTAP9-8Q9BYQ0 159 aa3.86□□□□□ -1.79
TRIO-201ENST00000344135 USH2AO75445 5202 aa3.86□□□□□ -1.79
TRIO-201ENST00000344135 MT2AP02795 61 aa3.85□□□□□ -1.79
TRIO-201ENST00000344135 KRTAP12-1P59990 96 aa3.85□□□□□ -1.79
TRIO-201ENST00000344135 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
TRIO-201ENST00000344135 KRTAP10-10P60014 251 aa3.84□□□□□ -1.79
TRIO-201ENST00000344135 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
TRIO-201ENST00000344135 FSIP2Q5CZC0 6907 aa3.78□□□□□ -1.8
TRIO-201ENST00000344135 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
TRIO-201ENST00000344135 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
TRIO-201ENST00000344135 MT1BP07438 61 aa3.64□□□□□ -1.83
TRIO-201ENST00000344135 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
TRIO-201ENST00000344135 KMT2DO14686 5537 aa3.6□□□□□ -1.83
TRIO-201ENST00000344135 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
TRIO-201ENST00000344135 SSPOA2VEC9 5147 aa3.56□□□□□ -1.84
TRIO-201ENST00000344135 MT1XP80297 61 aa3.54□□□□□ -1.84
TRIO-201ENST00000344135 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
TRIO-201ENST00000344135 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
TRIO-201ENST00000344135 TNP1P09430 55 aa3.46□□□□□ -1.86
TRIO-201ENST00000344135 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
TRIO-201ENST00000344135 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
TRIO-201ENST00000344135 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
TRIO-201ENST00000344135 INE1O15225 51 aa3.38□□□□□ -1.87
TRIO-201ENST00000344135 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
TRIO-201ENST00000344135 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
TRIO-201ENST00000344135 KRTAP10-12P60413 245 aa3.34□□□□□ -1.87
TRIO-201ENST00000344135 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
TRIO-201ENST00000344135 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
TRIO-201ENST00000344135 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
TRIO-201ENST00000344135 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
TRIO-201ENST00000344135 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
TRIO-201ENST00000344135 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
TRIO-201ENST00000344135 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
TRIO-201ENST00000344135 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TRIO-201ENST00000344135 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
TRIO-201ENST00000344135 CRCT1Q9UGL9 99 aa3.16□□□□□ -1.9
TRIO-201ENST00000344135 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
TRIO-201ENST00000344135 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
TRIO-201ENST00000344135 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms