RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KRTAP3-3Q9BYR6 98 aa8□□□□□ -1.13
CXCL12-201ENST00000343575 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
CXCL12-201ENST00000343575 HERC1Q15751 4861 aa7.98□□□□□ -1.13
CXCL12-201ENST00000343575 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
CXCL12-201ENST00000343575 UQCR11O14957 56 aa7.96□□□□□ -1.13
CXCL12-201ENST00000343575 LPAP08519 4548 aa7.95□□□□□ -1.14
CXCL12-201ENST00000343575 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
CXCL12-201ENST00000343575 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
CXCL12-201ENST00000343575 A8MUU9 505 aa7.92□□□□□ -1.14
CXCL12-201ENST00000343575 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
CXCL12-201ENST00000343575 XP32Q5T750 250 aa7.92□□□□□ -1.14
CXCL12-201ENST00000343575 LRP2P98164 4655 aa7.88□□□□□ -1.15
CXCL12-201ENST00000343575 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
CXCL12-201ENST00000343575 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
CXCL12-201ENST00000343575 PRAC1Q96KF2 57 aa7.83□□□□□ -1.16
CXCL12-201ENST00000343575 IGKV2D-30A0A075B6S6 120 aa7.83□□□□□ -1.16
CXCL12-201ENST00000343575 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
CXCL12-201ENST00000343575 ADM2Q7Z4H4 148 aa7.75□□□□□ -1.17
CXCL12-201ENST00000343575 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
CXCL12-201ENST00000343575 KRTAP4-1Q9BYQ7 146 aa7.62□□□□□ -1.19
CXCL12-201ENST00000343575 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
CXCL12-201ENST00000343575 MUC17Q685J3 4493 aa7.61□□□□□ -1.19
CXCL12-201ENST00000343575 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
CXCL12-201ENST00000343575 A0A1B0GU33 70 aa7.51□□□□□ -1.21
CXCL12-201ENST00000343575 H0YAA0 97 aa7.51□□□□□ -1.21
CXCL12-201ENST00000343575 MUC2Q02817 5179 aa7.51□□□□□ -1.21
CXCL12-201ENST00000343575 KRTAP25-1Q3LHN0 102 aa7.49□□□□□ -1.21
CXCL12-201ENST00000343575 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
CXCL12-201ENST00000343575 K7ERS5 55 aa7.47□□□□□ -1.21
CXCL12-201ENST00000343575 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
CXCL12-201ENST00000343575 H3BS24 57 aa7.43□□□□□ -1.22
CXCL12-201ENST00000343575 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
CXCL12-201ENST00000343575 KRTAP19-2Q3LHN2 52 aa7.41□□□□□ -1.22
CXCL12-201ENST00000343575 RNF213Q63HN8 5207 aa7.4□□□□□ -1.22
CXCL12-201ENST00000343575 ROMO1P60602 79 aa7.34□□□□□ -1.23
CXCL12-201ENST00000343575 LCE2CQ5TA81 110 aa7.27□□□□□ -1.25
CXCL12-201ENST00000343575 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
CXCL12-201ENST00000343575 S4R3F8 94 aa7.15□□□□□ -1.26
CXCL12-201ENST00000343575 FLGP20930 4061 aaPredicted RBP7.15□□□□□ -1.26
CXCL12-201ENST00000343575 KRTAP10-6P60371 365 aaPredicted RBP7.1□□□□□ -1.27
CXCL12-201ENST00000343575 MT1HP80294 61 aa7.09□□□□□ -1.28
CXCL12-201ENST00000343575 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
CXCL12-201ENST00000343575 P0C880 135 aa7.02□□□□□ -1.28
CXCL12-201ENST00000343575 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
CXCL12-201ENST00000343575 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
CXCL12-201ENST00000343575 A0A0D9SG42 100 aa6.98□□□□□ -1.29
CXCL12-201ENST00000343575 LCE2BO14633 110 aa6.98□□□□□ -1.29
CXCL12-201ENST00000343575 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
CXCL12-201ENST00000343575 M0R2T5 61 aa6.91□□□□□ -1.3
CXCL12-201ENST00000343575 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
CXCL12-201ENST00000343575 M0QZ58 72 aa6.86□□□□□ -1.31
CXCL12-201ENST00000343575 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
CXCL12-201ENST00000343575 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
CXCL12-201ENST00000343575 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
CXCL12-201ENST00000343575 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
CXCL12-201ENST00000343575 C10orf95Q9H7T3 257 aa6.81□□□□□ -1.32
CXCL12-201ENST00000343575 MT2AP02795 61 aa6.77□□□□□ -1.33
CXCL12-201ENST00000343575 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
CXCL12-201ENST00000343575 MT1FP04733 61 aa6.75□□□□□ -1.33
CXCL12-201ENST00000343575 LOC100996750A0A140TA64 210 aa6.73□□□□□ -1.33
CXCL12-201ENST00000343575 KRTAP4-6Q9BYQ5 205 aa6.73□□□□□ -1.33
CXCL12-201ENST00000343575 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
CXCL12-201ENST00000343575 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
CXCL12-201ENST00000343575 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
CXCL12-201ENST00000343575 R4GN34 69 aa6.58□□□□□ -1.36
CXCL12-201ENST00000343575 SPRR2GQ9BYE4 73 aa6.56□□□□□ -1.36
CXCL12-201ENST00000343575 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
CXCL12-201ENST00000343575 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
CXCL12-201ENST00000343575 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
CXCL12-201ENST00000343575 MT1BP07438 61 aa6.37□□□□□ -1.39
CXCL12-201ENST00000343575 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
CXCL12-201ENST00000343575 USH2AO75445 5202 aa6.29□□□□□ -1.4
CXCL12-201ENST00000343575 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
CXCL12-201ENST00000343575 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
CXCL12-201ENST00000343575 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
CXCL12-201ENST00000343575 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.43
CXCL12-201ENST00000343575 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
CXCL12-201ENST00000343575 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
CXCL12-201ENST00000343575 MT1XP80297 61 aa6.13□□□□□ -1.43
CXCL12-201ENST00000343575 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
CXCL12-201ENST00000343575 TNP1P09430 55 aa6.09□□□□□ -1.44
CXCL12-201ENST00000343575 KRTAP19-6Q3LI70 58 aa6.04□□□□□ -1.44
CXCL12-201ENST00000343575 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
CXCL12-201ENST00000343575 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
CXCL12-201ENST00000343575 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
CXCL12-201ENST00000343575 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
CXCL12-201ENST00000343575 FCGBPQ9Y6R7 5405 aaPredicted RBP5.88□□□□□ -1.47
CXCL12-201ENST00000343575 KRTAP10-7P60409 375 aaPredicted RBP5.88□□□□□ -1.47
CXCL12-201ENST00000343575 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.87□□□□□ -1.47
CXCL12-201ENST00000343575 KRTAP9-6A0A140TA67 174 aa5.83□□□□□ -1.48
CXCL12-201ENST00000343575 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
CXCL12-201ENST00000343575 KMT2DO14686 5537 aa5.72□□□□□ -1.49
CXCL12-201ENST00000343575 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
CXCL12-201ENST00000343575 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
CXCL12-201ENST00000343575 INE1O15225 51 aa5.64□□□□□ -1.51
CXCL12-201ENST00000343575 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
CXCL12-201ENST00000343575 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
CXCL12-201ENST00000343575 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
CXCL12-201ENST00000343575 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
CXCL12-201ENST00000343575 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms