RNA–Protein interactions for RNA: ENST00000343028.8

TM7SF3-201, Transcript of transmembrane 7 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM7SF3, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-201ENST00000343028 KRTAP3-1Q9BYR8 98 aa10.35□□□□□ -0.75
TM7SF3-201ENST00000343028 RYR1P21817 5038 aa10.31□□□□□ -0.76
TM7SF3-201ENST00000343028 KRTAP10-8P60410 259 aa10.27□□□□□ -0.76
TM7SF3-201ENST00000343028 EPPK1P58107 5090 aaKnown RBP10.17□□□□□ -0.78
TM7SF3-201ENST00000343028 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
TM7SF3-201ENST00000343028 XP32Q5T750 250 aa10.11□□□□□ -0.79
TM7SF3-201ENST00000343028 LPAP08519 4548 aa10.07□□□□□ -0.8
TM7SF3-201ENST00000343028 H0YAA0 97 aa10.07□□□□□ -0.8
TM7SF3-201ENST00000343028 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
TM7SF3-201ENST00000343028 MT1HL1P0DM35 61 aa10.05□□□□□ -0.8
TM7SF3-201ENST00000343028 KRTAP25-1Q3LHN0 102 aa10.05□□□□□ -0.8
TM7SF3-201ENST00000343028 LRP2P98164 4655 aa10.01□□□□□ -0.81
TM7SF3-201ENST00000343028 A0A1B0GU33 70 aa9.98□□□□□ -0.81
TM7SF3-201ENST00000343028 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
TM7SF3-201ENST00000343028 ROMO1P60602 79 aa9.98□□□□□ -0.81
TM7SF3-201ENST00000343028 H1FX-AS1Q4G0G2 97 aa9.92□□□□□ -0.82
TM7SF3-201ENST00000343028 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
TM7SF3-201ENST00000343028 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.83
TM7SF3-201ENST00000343028 KRTAP3-3Q9BYR6 98 aa9.9□□□□□ -0.83
TM7SF3-201ENST00000343028 S4R3F8 94 aa9.82□□□□□ -0.84
TM7SF3-201ENST00000343028 KRTAP10-6P60371 365 aaPredicted RBP9.75□□□□□ -0.85
TM7SF3-201ENST00000343028 P0C880 135 aa9.73□□□□□ -0.85
TM7SF3-201ENST00000343028 K7ERS5 55 aa9.71□□□□□ -0.85
TM7SF3-201ENST00000343028 A0A0D9SG42 100 aa9.71□□□□□ -0.86
TM7SF3-201ENST00000343028 KRTAP13-4Q3LI77 160 aa9.71□□□□□ -0.86
TM7SF3-201ENST00000343028 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
TM7SF3-201ENST00000343028 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
TM7SF3-201ENST00000343028 HERC2O95714 4834 aa9.56□□□□□ -0.88
TM7SF3-201ENST00000343028 SPINT4Q6UDR6 99 aa9.53□□□□□ -0.88
TM7SF3-201ENST00000343028 J3QL48 77 aa9.49□□□□□ -0.89
TM7SF3-201ENST00000343028 MUC2Q02817 5179 aa9.44□□□□□ -0.9
TM7SF3-201ENST00000343028 C10orf95Q9H7T3 257 aa9.42□□□□□ -0.9
TM7SF3-201ENST00000343028 MUC17Q685J3 4493 aa9.4□□□□□ -0.9
TM7SF3-201ENST00000343028 KRTAP4-1Q9BYQ7 146 aa9.4□□□□□ -0.9
TM7SF3-201ENST00000343028 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
TM7SF3-201ENST00000343028 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
TM7SF3-201ENST00000343028 NDUFAF8A1L188 74 aa9.34□□□□□ -0.91
TM7SF3-201ENST00000343028 KRTAP15-1Q3LI76 137 aa9.29□□□□□ -0.92
TM7SF3-201ENST00000343028 KRTAP12-1P59990 96 aa9.25□□□□□ -0.93
TM7SF3-201ENST00000343028 HERC1Q15751 4861 aa9.24□□□□□ -0.93
TM7SF3-201ENST00000343028 BIRC6Q9NR09 4857 aa9.21□□□□□ -0.94
TM7SF3-201ENST00000343028 M0QZ58 72 aa9.21□□□□□ -0.94
TM7SF3-201ENST00000343028 PCLOQ9Y6V0 5065 aa9.19□□□□□ -0.94
TM7SF3-201ENST00000343028 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
TM7SF3-201ENST00000343028 R4GN34 69 aa9.16□□□□□ -0.94
TM7SF3-201ENST00000343028 KRTAP19-2Q3LHN2 52 aa9.08□□□□□ -0.96
TM7SF3-201ENST00000343028 HMCN2Q8NDA2 5059 aa8.95□□□□□ -0.98
TM7SF3-201ENST00000343028 FAT4Q6V0I7 4981 aa8.95□□□□□ -0.98
TM7SF3-201ENST00000343028 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
TM7SF3-201ENST00000343028 RNF213Q63HN8 5207 aa8.86□□□□□ -0.99
TM7SF3-201ENST00000343028 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
TM7SF3-201ENST00000343028 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
TM7SF3-201ENST00000343028 CAMK2N1Q7Z7J9 78 aa8.69□□□□□ -1.02
TM7SF3-201ENST00000343028 A0A0A0MQY5 61 aa8.66□□□□□ -1.02
TM7SF3-201ENST00000343028 PLAC4Q8WY50 150 aa8.65□□□□□ -1.03
TM7SF3-201ENST00000343028 LCE2CQ5TA81 110 aa8.64□□□□□ -1.03
TM7SF3-201ENST00000343028 M0R2T5 61 aa8.58□□□□□ -1.04
TM7SF3-201ENST00000343028 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
TM7SF3-201ENST00000343028 MT1HP80294 61 aa8.43□□□□□ -1.06
TM7SF3-201ENST00000343028 KRTAP19-1Q8IUB9 90 aa8.35□□□□□ -1.07
TM7SF3-201ENST00000343028 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
TM7SF3-201ENST00000343028 MT1FP04733 61 aa8.29□□□□□ -1.08
TM7SF3-201ENST00000343028 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
TM7SF3-201ENST00000343028 MT2AP02795 61 aa8.26□□□□□ -1.09
TM7SF3-201ENST00000343028 TNP1P09430 55 aa8.24□□□□□ -1.09
TM7SF3-201ENST00000343028 PP632Q6XCG6 107 aa8.23□□□□□ -1.09
TM7SF3-201ENST00000343028 KRTAP9-8Q9BYQ0 159 aa8.21□□□□□ -1.1
TM7SF3-201ENST00000343028 MT1BP07438 61 aa7.93□□□□□ -1.14
TM7SF3-201ENST00000343028 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
TM7SF3-201ENST00000343028 KRTAP19-8Q3LI54 63 aa7.91□□□□□ -1.14
TM7SF3-201ENST00000343028 SPRR5A0A1B0GTR4 108 aa7.89□□□□□ -1.15
TM7SF3-201ENST00000343028 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
TM7SF3-201ENST00000343028 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
TM7SF3-201ENST00000343028 USH2AO75445 5202 aa7.84□□□□□ -1.15
TM7SF3-201ENST00000343028 KRTAP9-3Q9BYQ3 159 aa7.84□□□□□ -1.15
TM7SF3-201ENST00000343028 MT1XP80297 61 aa7.84□□□□□ -1.15
TM7SF3-201ENST00000343028 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
TM7SF3-201ENST00000343028 LCE2BO14633 110 aa7.64□□□□□ -1.19
TM7SF3-201ENST00000343028 KRTAP10-12P60413 245 aa7.63□□□□□ -1.19
TM7SF3-201ENST00000343028 KMT2DO14686 5537 aa7.62□□□□□ -1.19
TM7SF3-201ENST00000343028 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
TM7SF3-201ENST00000343028 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
TM7SF3-201ENST00000343028 LCE2AQ5TA79 106 aaPredicted RBP7.52□□□□□ -1.21
TM7SF3-201ENST00000343028 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
TM7SF3-201ENST00000343028 FSIP2Q5CZC0 6907 aa7.37□□□□□ -1.23
TM7SF3-201ENST00000343028 INE1O15225 51 aa7.35□□□□□ -1.23
TM7SF3-201ENST00000343028 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
TM7SF3-201ENST00000343028 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
TM7SF3-201ENST00000343028 KRTAP19-5Q3LI72 72 aa7.31□□□□□ -1.24
TM7SF3-201ENST00000343028 SSPOA2VEC9 5147 aa7.14□□□□□ -1.27
TM7SF3-201ENST00000343028 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
TM7SF3-201ENST00000343028 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
TM7SF3-201ENST00000343028 KRTAP4-7Q9BYR0 210 aa6.97□□□□□ -1.29
TM7SF3-201ENST00000343028 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
TM7SF3-201ENST00000343028 FCGBPQ9Y6R7 5405 aaPredicted RBP6.79□□□□□ -1.32
TM7SF3-201ENST00000343028 MT1EP04732 61 aa6.78□□□□□ -1.32
TM7SF3-201ENST00000343028 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
TM7SF3-201ENST00000343028 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
TM7SF3-201ENST00000343028 MT1LQ93083 61 aa6.75□□□□□ -1.33
TM7SF3-201ENST00000343028 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms