RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 MT2AP02795 61 aa10.52□□□□□ -0.73
RBM38-201ENST00000342690 CSAG1Q6PB30 78 aa10.48□□□□□ -0.73
RBM38-201ENST00000342690 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
RBM38-201ENST00000342690 NDUFC1O43677 76 aa10.46□□□□□ -0.73
RBM38-201ENST00000342690 KRTAP9-6A0A140TA67 174 aa10.45□□□□□ -0.74
RBM38-201ENST00000342690 MT1FP04733 61 aa10.44□□□□□ -0.74
RBM38-201ENST00000342690 ACYP2P14621 99 aa10.43□□□□□ -0.74
RBM38-201ENST00000342690 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
RBM38-201ENST00000342690 KRTAP10-10P60014 251 aa10.37□□□□□ -0.75
RBM38-201ENST00000342690 CCDC179H3BU77 68 aa10.36□□□□□ -0.75
RBM38-201ENST00000342690 H7BZZ5 65 aa10.35□□□□□ -0.75
RBM38-201ENST00000342690 CYSTM1Q9H1C7 97 aa10.35□□□□□ -0.75
RBM38-201ENST00000342690 CHKB-CPT1BH3BT56 60 aa10.28□□□□□ -0.76
RBM38-201ENST00000342690 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
RBM38-201ENST00000342690 SPTSSBQ8NFR3 76 aa10.23□□□□□ -0.77
RBM38-201ENST00000342690 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.78
RBM38-201ENST00000342690 H0YAA0 97 aa10.16□□□□□ -0.78
RBM38-201ENST00000342690 COA5Q86WW8 74 aa10.15□□□□□ -0.78
RBM38-201ENST00000342690 LCE2BO14633 110 aa10.13□□□□□ -0.79
RBM38-201ENST00000342690 ATP5EP56381 51 aaPredicted RBP10.12□□□□□ -0.79
RBM38-201ENST00000342690 CRCT1Q9UGL9 99 aa10.1□□□□□ -0.79
RBM38-201ENST00000342690 ADM2Q7Z4H4 148 aa10.08□□□□□ -0.8
RBM38-201ENST00000342690 TMEM258P61165 79 aa10.05□□□□□ -0.8
RBM38-201ENST00000342690 USH2AO75445 5202 aa10.02□□□□□ -0.81
RBM38-201ENST00000342690 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
RBM38-201ENST00000342690 KRTAP19-1Q8IUB9 90 aa9.94□□□□□ -0.82
RBM38-201ENST00000342690 PCP4P48539 62 aa9.91□□□□□ -0.82
RBM38-201ENST00000342690 P0C880 135 aa9.9□□□□□ -0.82
RBM38-201ENST00000342690 KRTAP3-2Q9BYR7 98 aa9.89□□□□□ -0.83
RBM38-201ENST00000342690 SPRR2GQ9BYE4 73 aa9.86□□□□□ -0.83
RBM38-201ENST00000342690 SSPOA2VEC9 5147 aa9.84□□□□□ -0.83
RBM38-201ENST00000342690 SEC61GP60059 68 aa9.8□□□□□ -0.84
RBM38-201ENST00000342690 R4GN34 69 aa9.8□□□□□ -0.84
RBM38-201ENST00000342690 KRTAP19-8Q3LI54 63 aa9.75□□□□□ -0.85
RBM38-201ENST00000342690 SERP1Q9Y6X1 66 aa9.75□□□□□ -0.85
RBM38-201ENST00000342690 M0QZ58 72 aa9.74□□□□□ -0.85
RBM38-201ENST00000342690 MT1BP07438 61 aa9.71□□□□□ -0.86
RBM38-201ENST00000342690 Q5VV11 94 aa9.7□□□□□ -0.86
RBM38-201ENST00000342690 KRTAP19-6Q3LI70 58 aa9.69□□□□□ -0.86
RBM38-201ENST00000342690 A0A1B0GU69 56 aa9.64□□□□□ -0.87
RBM38-201ENST00000342690 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
RBM38-201ENST00000342690 PRR15LQ9BU68 103 aa9.56□□□□□ -0.88
RBM38-201ENST00000342690 FCGBPQ9Y6R7 5405 aaPredicted RBP9.56□□□□□ -0.88
RBM38-201ENST00000342690 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
RBM38-201ENST00000342690 A0A1B0GU33 70 aa9.52□□□□□ -0.89
RBM38-201ENST00000342690 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
RBM38-201ENST00000342690 PLAC4Q8WY50 150 aa9.47□□□□□ -0.89
RBM38-201ENST00000342690 V9GYY9 64 aa9.41□□□□□ -0.9
RBM38-201ENST00000342690 A6NN06 94 aa9.39□□□□□ -0.91
RBM38-201ENST00000342690 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.39□□□□□ -0.91
RBM38-201ENST00000342690 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
RBM38-201ENST00000342690 SMIM26A0A096LP01 95 aa9.38□□□□□ -0.91
RBM38-201ENST00000342690 KRTAP10-5P60370 271 aa9.38□□□□□ -0.91
RBM38-201ENST00000342690 SPATA8Q6RVD6 105 aa9.38□□□□□ -0.91
RBM38-201ENST00000342690 KRTAP9-7A8MTY7 169 aa9.37□□□□□ -0.91
RBM38-201ENST00000342690 Q1T7F1 81 aa9.34□□□□□ -0.91
RBM38-201ENST00000342690 A0A0D9SG42 100 aa9.3□□□□□ -0.92
RBM38-201ENST00000342690 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
RBM38-201ENST00000342690 UQCR11O14957 56 aa9.22□□□□□ -0.93
RBM38-201ENST00000342690 PSPHP1O15172 72 aa9.22□□□□□ -0.93
RBM38-201ENST00000342690 MT1XP80297 61 aa9.2□□□□□ -0.94
RBM38-201ENST00000342690 A8MU10 97 aa9.15□□□□□ -0.94
RBM38-201ENST00000342690 MACF1Q9UPN3 7388 aaKnown RBP9.15□□□□□ -0.95
RBM38-201ENST00000342690 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
RBM38-201ENST00000342690 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
RBM38-201ENST00000342690 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
RBM38-201ENST00000342690 SYNE2Q8WXH0 6885 aaKnown RBP9.07□□□□□ -0.96
RBM38-201ENST00000342690 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
RBM38-201ENST00000342690 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
RBM38-201ENST00000342690 A6NED7 52 aa8.98□□□□□ -0.97
RBM38-201ENST00000342690 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
RBM38-201ENST00000342690 K7ERS5 55 aa8.83□□□□□ -1
RBM38-201ENST00000342690 KRTAP10-7P60409 375 aaPredicted RBP8.8□□□□□ -1
RBM38-201ENST00000342690 KRTAP10-12P60413 245 aa8.73□□□□□ -1.01
RBM38-201ENST00000342690 CDC42SE1Q9NRR8 79 aa8.7□□□□□ -1.02
RBM38-201ENST00000342690 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
RBM38-201ENST00000342690 KMT2DO14686 5537 aa8.68□□□□□ -1.02
RBM38-201ENST00000342690 KRTAP4-8A0A0G2JLE6 195 aa8.67□□□□□ -1.02
RBM38-201ENST00000342690 KRTAP4-8Q9BYQ9 185 aa8.67□□□□□ -1.02
RBM38-201ENST00000342690 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
RBM38-201ENST00000342690 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
RBM38-201ENST00000342690 TNP1P09430 55 aa8.55□□□□□ -1.04
RBM38-201ENST00000342690 SPRR2FQ96RM1 72 aa8.53□□□□□ -1.04
RBM38-201ENST00000342690 NEBP20929 6669 aa8.51□□□□□ -1.05
RBM38-201ENST00000342690 MUC12Q9UKN1 5478 aa8.48□□□□□ -1.05
RBM38-201ENST00000342690 BRK1Q8WUW1 75 aa8.4□□□□□ -1.06
RBM38-201ENST00000342690 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
RBM38-201ENST00000342690 SPRR2EP22531 72 aa8.32□□□□□ -1.08
RBM38-201ENST00000342690 SPRR2BP35325 72 aa8.32□□□□□ -1.08
RBM38-201ENST00000342690 SPRR2AP35326 72 aa8.32□□□□□ -1.08
RBM38-201ENST00000342690 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
RBM38-201ENST00000342690 ROMO1P60602 79 aa8.3□□□□□ -1.08
RBM38-201ENST00000342690 LCE1AQ5T7P2 110 aa8.27□□□□□ -1.09
RBM38-201ENST00000342690 LCE3AQ5TA76 89 aa8.27□□□□□ -1.09
RBM38-201ENST00000342690 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
RBM38-201ENST00000342690 KRTAP20-1Q3LI63 56 aa8.18□□□□□ -1.1
RBM38-201ENST00000342690 KRTAP19-5Q3LI72 72 aa8.14□□□□□ -1.11
RBM38-201ENST00000342690 MT1EP04732 61 aa8.12□□□□□ -1.11
RBM38-201ENST00000342690 KRTAP23-1A1A580 65 aa8.07□□□□□ -1.12
RBM38-201ENST00000342690 SPRR2DP22532 72 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms