RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 SPINT4Q6UDR6 99 aa8.12□□□□□ -1.11
PBX3-201ENST00000342287 J3QL48 77 aa8.1□□□□□ -1.11
PBX3-201ENST00000342287 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
PBX3-201ENST00000342287 H0YAA0 97 aa8.08□□□□□ -1.12
PBX3-201ENST00000342287 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
PBX3-201ENST00000342287 TNXBP22105 4242 aa8.05□□□□□ -1.12
PBX3-201ENST00000342287 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
PBX3-201ENST00000342287 IGKV2-30P06310 120 aa8.02□□□□□ -1.13
PBX3-201ENST00000342287 KRTAP4-5Q9BYR2 181 aa8.01□□□□□ -1.13
PBX3-201ENST00000342287 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
PBX3-201ENST00000342287 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
PBX3-201ENST00000342287 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
PBX3-201ENST00000342287 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
PBX3-201ENST00000342287 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
PBX3-201ENST00000342287 A0A1B0GU33 70 aa7.91□□□□□ -1.14
PBX3-201ENST00000342287 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.15
PBX3-201ENST00000342287 K7ERS5 55 aa7.89□□□□□ -1.15
PBX3-201ENST00000342287 BIRC6Q9NR09 4857 aa7.83□□□□□ -1.16
PBX3-201ENST00000342287 LUZP6Q538Z0 58 aa7.83□□□□□ -1.16
PBX3-201ENST00000342287 TPRXLQ17RH7 258 aa7.82□□□□□ -1.16
PBX3-201ENST00000342287 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
PBX3-201ENST00000342287 HERC2O95714 4834 aa7.77□□□□□ -1.17
PBX3-201ENST00000342287 C10orf95Q9H7T3 257 aa7.76□□□□□ -1.17
PBX3-201ENST00000342287 XP32Q5T750 250 aa7.75□□□□□ -1.17
PBX3-201ENST00000342287 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
PBX3-201ENST00000342287 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
PBX3-201ENST00000342287 SEC61BP60468 96 aaKnown RBP7.63□□□□□ -1.19
PBX3-201ENST00000342287 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
PBX3-201ENST00000342287 A0A0D9SG42 100 aa7.56□□□□□ -1.2
PBX3-201ENST00000342287 LPAP08519 4548 aa7.51□□□□□ -1.21
PBX3-201ENST00000342287 LRP2P98164 4655 aa7.47□□□□□ -1.21
PBX3-201ENST00000342287 KRTAP3-1Q9BYR8 98 aa7.47□□□□□ -1.21
PBX3-201ENST00000342287 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
PBX3-201ENST00000342287 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
PBX3-201ENST00000342287 HERC1Q15751 4861 aa7.31□□□□□ -1.24
PBX3-201ENST00000342287 S4R3F8 94 aa7.3□□□□□ -1.24
PBX3-201ENST00000342287 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
PBX3-201ENST00000342287 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
PBX3-201ENST00000342287 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
PBX3-201ENST00000342287 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
PBX3-201ENST00000342287 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
PBX3-201ENST00000342287 KRTAP3-3Q9BYR6 98 aa7.2□□□□□ -1.26
PBX3-201ENST00000342287 KRTAP3-2Q9BYR7 98 aa7.17□□□□□ -1.26
PBX3-201ENST00000342287 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
PBX3-201ENST00000342287 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
PBX3-201ENST00000342287 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
PBX3-201ENST00000342287 MUC2Q02817 5179 aa7.04□□□□□ -1.28
PBX3-201ENST00000342287 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.3
PBX3-201ENST00000342287 LCE2CQ5TA81 110 aa6.9□□□□□ -1.31
PBX3-201ENST00000342287 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
PBX3-201ENST00000342287 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
PBX3-201ENST00000342287 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
PBX3-201ENST00000342287 MT1HP80294 61 aa6.75□□□□□ -1.33
PBX3-201ENST00000342287 M0QZ58 72 aa6.74□□□□□ -1.33
PBX3-201ENST00000342287 M0R2T5 61 aa6.73□□□□□ -1.33
PBX3-201ENST00000342287 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
PBX3-201ENST00000342287 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
PBX3-201ENST00000342287 R4GN34 69 aa6.69□□□□□ -1.34
PBX3-201ENST00000342287 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
PBX3-201ENST00000342287 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
PBX3-201ENST00000342287 KRTAP9-8Q9BYQ0 159 aa6.52□□□□□ -1.37
PBX3-201ENST00000342287 MT2AP02795 61 aa6.51□□□□□ -1.37
PBX3-201ENST00000342287 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
PBX3-201ENST00000342287 MT1FP04733 61 aa6.47□□□□□ -1.37
PBX3-201ENST00000342287 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
PBX3-201ENST00000342287 LCE2AQ5TA79 106 aaPredicted RBP6.42□□□□□ -1.38
PBX3-201ENST00000342287 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.39
PBX3-201ENST00000342287 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
PBX3-201ENST00000342287 INE1O15225 51 aa6.35□□□□□ -1.39
PBX3-201ENST00000342287 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
PBX3-201ENST00000342287 KRTAP9-3Q9BYQ3 159 aa6.28□□□□□ -1.4
PBX3-201ENST00000342287 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
PBX3-201ENST00000342287 MT1BP07438 61 aa6.14□□□□□ -1.43
PBX3-201ENST00000342287 TNP1P09430 55 aa6.11□□□□□ -1.43
PBX3-201ENST00000342287 LCE2BO14633 110 aa6.09□□□□□ -1.43
PBX3-201ENST00000342287 KRTAP10-5P60370 271 aa5.96□□□□□ -1.45
PBX3-201ENST00000342287 MT1XP80297 61 aa5.96□□□□□ -1.45
PBX3-201ENST00000342287 USH2AO75445 5202 aa5.84□□□□□ -1.48
PBX3-201ENST00000342287 LCE2DQ5TA82 110 aaPredicted RBP5.81□□□□□ -1.48
PBX3-201ENST00000342287 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
PBX3-201ENST00000342287 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
PBX3-201ENST00000342287 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
PBX3-201ENST00000342287 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
PBX3-201ENST00000342287 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
PBX3-201ENST00000342287 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.52
PBX3-201ENST00000342287 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
PBX3-201ENST00000342287 KRTAP9-2Q9BYQ4 174 aa5.53□□□□□ -1.52
PBX3-201ENST00000342287 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
PBX3-201ENST00000342287 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
PBX3-201ENST00000342287 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
PBX3-201ENST00000342287 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
PBX3-201ENST00000342287 KMT2DO14686 5537 aa5.41□□□□□ -1.54
PBX3-201ENST00000342287 FCGBPQ9Y6R7 5405 aaPredicted RBP5.4□□□□□ -1.54
PBX3-201ENST00000342287 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
PBX3-201ENST00000342287 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
PBX3-201ENST00000342287 MT1EP04732 61 aa5.22□□□□□ -1.57
PBX3-201ENST00000342287 MT1LQ93083 61 aa5.13□□□□□ -1.59
PBX3-201ENST00000342287 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
PBX3-201ENST00000342287 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
PBX3-201ENST00000342287 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms