RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
PMS1-201ENST00000342075 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
PMS1-201ENST00000342075 S4R3F8 94 aa6.79□□□□□ -1.32
PMS1-201ENST00000342075 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
PMS1-201ENST00000342075 MT1HP80294 61 aa6.76□□□□□ -1.33
PMS1-201ENST00000342075 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.33
PMS1-201ENST00000342075 M0R2T5 61 aa6.67□□□□□ -1.34
PMS1-201ENST00000342075 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
PMS1-201ENST00000342075 LCE2AQ5TA79 106 aaPredicted RBP6.58□□□□□ -1.36
PMS1-201ENST00000342075 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
PMS1-201ENST00000342075 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
PMS1-201ENST00000342075 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
PMS1-201ENST00000342075 P0C880 135 aa6.51□□□□□ -1.37
PMS1-201ENST00000342075 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
PMS1-201ENST00000342075 SMIM26A0A096LP01 95 aa6.5□□□□□ -1.37
PMS1-201ENST00000342075 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
PMS1-201ENST00000342075 KRTAP9-8Q9BYQ0 159 aa6.48□□□□□ -1.37
PMS1-201ENST00000342075 PSPHP1O15172 72 aa6.47□□□□□ -1.37
PMS1-201ENST00000342075 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
PMS1-201ENST00000342075 MT2AP02795 61 aa6.45□□□□□ -1.38
PMS1-201ENST00000342075 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
PMS1-201ENST00000342075 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
PMS1-201ENST00000342075 MT1FP04733 61 aa6.44□□□□□ -1.38
PMS1-201ENST00000342075 A0A1B0GU69 56 aa6.44□□□□□ -1.38
PMS1-201ENST00000342075 Q1T7F1 81 aa6.43□□□□□ -1.38
PMS1-201ENST00000342075 H0YAA0 97 aa6.39□□□□□ -1.39
PMS1-201ENST00000342075 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
PMS1-201ENST00000342075 SEC61GP60059 68 aa6.37□□□□□ -1.39
PMS1-201ENST00000342075 Q5VV11 94 aa6.35□□□□□ -1.39
PMS1-201ENST00000342075 KRTAP13-4Q3LI77 160 aa6.35□□□□□ -1.39
PMS1-201ENST00000342075 V9GYY9 64 aa6.33□□□□□ -1.4
PMS1-201ENST00000342075 SPATA8Q6RVD6 105 aa6.32□□□□□ -1.4
PMS1-201ENST00000342075 A0A1B0GU33 70 aa6.29□□□□□ -1.4
PMS1-201ENST00000342075 M0QZ58 72 aa6.27□□□□□ -1.41
PMS1-201ENST00000342075 R4GN34 69 aa6.25□□□□□ -1.41
PMS1-201ENST00000342075 LINC01554Q52M75 96 aa6.24□□□□□ -1.41
PMS1-201ENST00000342075 USH2AO75445 5202 aa6.24□□□□□ -1.41
PMS1-201ENST00000342075 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
PMS1-201ENST00000342075 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
PMS1-201ENST00000342075 A8MU10 97 aa6.22□□□□□ -1.41
PMS1-201ENST00000342075 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
PMS1-201ENST00000342075 A0A0D9SG42 100 aa6.21□□□□□ -1.42
PMS1-201ENST00000342075 A6NED7 52 aa6.2□□□□□ -1.42
PMS1-201ENST00000342075 UQCR11O14957 56 aa6.17□□□□□ -1.42
PMS1-201ENST00000342075 SPRR2GQ9BYE4 73 aa6.16□□□□□ -1.42
PMS1-201ENST00000342075 LCE2BO14633 110 aa6.15□□□□□ -1.43
PMS1-201ENST00000342075 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
PMS1-201ENST00000342075 CRIPTQ9P021 101 aa6.12□□□□□ -1.43
PMS1-201ENST00000342075 KRTAP12-2P59991 146 aa6.04□□□□□ -1.44
PMS1-201ENST00000342075 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
PMS1-201ENST00000342075 MT1BP07438 61 aa6.03□□□□□ -1.44
PMS1-201ENST00000342075 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
PMS1-201ENST00000342075 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
PMS1-201ENST00000342075 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
PMS1-201ENST00000342075 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
PMS1-201ENST00000342075 SSPOA2VEC9 5147 aa6□□□□□ -1.45
PMS1-201ENST00000342075 LCE2DQ5TA82 110 aaPredicted RBP5.94□□□□□ -1.46
PMS1-201ENST00000342075 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
PMS1-201ENST00000342075 PLAC4Q8WY50 150 aa5.9□□□□□ -1.47
PMS1-201ENST00000342075 A6NN06 94 aa5.89□□□□□ -1.47
PMS1-201ENST00000342075 CAMK2N1Q7Z7J9 78 aa5.84□□□□□ -1.47
PMS1-201ENST00000342075 MT1XP80297 61 aa5.8□□□□□ -1.48
PMS1-201ENST00000342075 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
PMS1-201ENST00000342075 K7ERS5 55 aa5.77□□□□□ -1.49
PMS1-201ENST00000342075 FCGBPQ9Y6R7 5405 aaPredicted RBP5.75□□□□□ -1.49
PMS1-201ENST00000342075 C10orf95Q9H7T3 257 aa5.73□□□□□ -1.49
PMS1-201ENST00000342075 PRO0628Q9UI54 55 aa5.73□□□□□ -1.49
PMS1-201ENST00000342075 KMT2DO14686 5537 aa5.71□□□□□ -1.5
PMS1-201ENST00000342075 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
PMS1-201ENST00000342075 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
PMS1-201ENST00000342075 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
PMS1-201ENST00000342075 KRTAP10-7P60409 375 aaPredicted RBP5.61□□□□□ -1.51
PMS1-201ENST00000342075 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
PMS1-201ENST00000342075 ROMO1P60602 79 aa5.59□□□□□ -1.51
PMS1-201ENST00000342075 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
PMS1-201ENST00000342075 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
PMS1-201ENST00000342075 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
PMS1-201ENST00000342075 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
PMS1-201ENST00000342075 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
PMS1-201ENST00000342075 TNP1P09430 55 aa5.48□□□□□ -1.53
PMS1-201ENST00000342075 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
PMS1-201ENST00000342075 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
PMS1-201ENST00000342075 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
PMS1-201ENST00000342075 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
PMS1-201ENST00000342075 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.56
PMS1-201ENST00000342075 MUC12Q9UKN1 5478 aa5.28□□□□□ -1.56
PMS1-201ENST00000342075 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.26□□□□□ -1.57
PMS1-201ENST00000342075 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
PMS1-201ENST00000342075 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
PMS1-201ENST00000342075 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
PMS1-201ENST00000342075 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
PMS1-201ENST00000342075 SVIPQ8NHG7 77 aa5.13□□□□□ -1.59
PMS1-201ENST00000342075 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
PMS1-201ENST00000342075 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
PMS1-201ENST00000342075 SPRR2FQ96RM1 72 aa5.13□□□□□ -1.59
PMS1-201ENST00000342075 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
PMS1-201ENST00000342075 MT1EP04732 61 aa5.08□□□□□ -1.6
PMS1-201ENST00000342075 KRTAP5-9P26371 169 aa5.04□□□□□ -1.6
PMS1-201ENST00000342075 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
PMS1-201ENST00000342075 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms