RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 Q1T7F1 81 aa10.3□□□□□ -0.76
CLDND1-201ENST00000341181 CHKB-CPT1BH3BT56 60 aa10.29□□□□□ -0.76
CLDND1-201ENST00000341181 PSPHP1O15172 72 aa10.28□□□□□ -0.76
CLDND1-201ENST00000341181 A8MUN3 132 aa10.21□□□□□ -0.77
CLDND1-201ENST00000341181 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
CLDND1-201ENST00000341181 PRR15LQ9BU68 103 aa10.15□□□□□ -0.78
CLDND1-201ENST00000341181 LINC01558Q9Y6Z2 57 aa10.12□□□□□ -0.79
CLDND1-201ENST00000341181 V9GYY9 64 aa10.12□□□□□ -0.79
CLDND1-201ENST00000341181 MT1HP80294 61 aa10.12□□□□□ -0.79
CLDND1-201ENST00000341181 Q5VV11 94 aa10.12□□□□□ -0.79
CLDND1-201ENST00000341181 LCA10Q71F78 164 aa10.06□□□□□ -0.8
CLDND1-201ENST00000341181 S4R3F8 94 aa10.04□□□□□ -0.8
CLDND1-201ENST00000341181 KRTAP3-3Q9BYR6 98 aa10□□□□□ -0.81
CLDND1-201ENST00000341181 LCE2AQ5TA79 106 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-201ENST00000341181 M0R2T5 61 aa9.95□□□□□ -0.82
CLDND1-201ENST00000341181 A0A1B0GU69 56 aa9.94□□□□□ -0.82
CLDND1-201ENST00000341181 A8MU10 97 aa9.94□□□□□ -0.82
CLDND1-201ENST00000341181 BRK1Q8WUW1 75 aa9.93□□□□□ -0.82
CLDND1-201ENST00000341181 SPTSSBQ8NFR3 76 aa9.88□□□□□ -0.83
CLDND1-201ENST00000341181 A6NED7 52 aa9.85□□□□□ -0.83
CLDND1-201ENST00000341181 CSAG1Q6PB30 78 aa9.82□□□□□ -0.84
CLDND1-201ENST00000341181 KRTAP10-6P60371 365 aaPredicted RBP9.78□□□□□ -0.84
CLDND1-201ENST00000341181 LORP23490 312 aaPredicted RBP9.75□□□□□ -0.85
CLDND1-201ENST00000341181 SEC61GP60059 68 aa9.75□□□□□ -0.85
CLDND1-201ENST00000341181 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
CLDND1-201ENST00000341181 PRO0628Q9UI54 55 aa9.69□□□□□ -0.86
CLDND1-201ENST00000341181 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
CLDND1-201ENST00000341181 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
CLDND1-201ENST00000341181 UQCR11O14957 56 aa9.64□□□□□ -0.87
CLDND1-201ENST00000341181 MT2AP02795 61 aa9.63□□□□□ -0.87
CLDND1-201ENST00000341181 P0C880 135 aa9.61□□□□□ -0.87
CLDND1-201ENST00000341181 A0A1B0GU33 70 aa9.6□□□□□ -0.87
CLDND1-201ENST00000341181 MT1FP04733 61 aa9.6□□□□□ -0.87
CLDND1-201ENST00000341181 MIR22HGQ0VDD5 57 aa9.58□□□□□ -0.88
CLDND1-201ENST00000341181 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
CLDND1-201ENST00000341181 ADM2Q7Z4H4 148 aa9.57□□□□□ -0.88
CLDND1-201ENST00000341181 H0YAA0 97 aa9.57□□□□□ -0.88
CLDND1-201ENST00000341181 KRTAP10-10P60014 251 aa9.51□□□□□ -0.89
CLDND1-201ENST00000341181 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
CLDND1-201ENST00000341181 PMAIP1Q13794 54 aa9.36□□□□□ -0.91
CLDND1-201ENST00000341181 KRTAP9-3Q9BYQ3 159 aa9.35□□□□□ -0.91
CLDND1-201ENST00000341181 A0A0D9SG42 100 aa9.33□□□□□ -0.92
CLDND1-201ENST00000341181 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
CLDND1-201ENST00000341181 A6NN06 94 aa9.27□□□□□ -0.92
CLDND1-201ENST00000341181 R4GN34 69 aa9.24□□□□□ -0.93
CLDND1-201ENST00000341181 SVIPQ8NHG7 77 aa9.23□□□□□ -0.93
CLDND1-201ENST00000341181 M0QZ58 72 aa9.23□□□□□ -0.93
CLDND1-201ENST00000341181 CRIPTQ9P021 101 aa9.23□□□□□ -0.93
CLDND1-201ENST00000341181 SPRR2GQ9BYE4 73 aa9.22□□□□□ -0.93
CLDND1-201ENST00000341181 LCE2BO14633 110 aa9.19□□□□□ -0.94
CLDND1-201ENST00000341181 USH2AO75445 5202 aa9.16□□□□□ -0.94
CLDND1-201ENST00000341181 LINC01554Q52M75 96 aa9.13□□□□□ -0.95
CLDND1-201ENST00000341181 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
CLDND1-201ENST00000341181 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
CLDND1-201ENST00000341181 FSIP2Q5CZC0 6907 aa9.1□□□□□ -0.95
CLDND1-201ENST00000341181 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
CLDND1-201ENST00000341181 SPINT4Q6UDR6 99 aa9.05□□□□□ -0.96
CLDND1-201ENST00000341181 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
CLDND1-201ENST00000341181 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
CLDND1-201ENST00000341181 MT1BP07438 61 aa8.99□□□□□ -0.97
CLDND1-201ENST00000341181 K7ERS5 55 aa8.98□□□□□ -0.97
CLDND1-201ENST00000341181 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
CLDND1-201ENST00000341181 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
CLDND1-201ENST00000341181 PRAC1Q96KF2 57 aa8.89□□□□□ -0.99
CLDND1-201ENST00000341181 PLAC4Q8WY50 150 aa8.78□□□□□ -1
CLDND1-201ENST00000341181 ROMO1P60602 79 aa8.74□□□□□ -1.01
CLDND1-201ENST00000341181 KRTAP19-6Q3LI70 58 aa8.64□□□□□ -1.03
CLDND1-201ENST00000341181 MT1XP80297 61 aa8.62□□□□□ -1.03
CLDND1-201ENST00000341181 CRCT1Q9UGL9 99 aa8.62□□□□□ -1.03
CLDND1-201ENST00000341181 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
CLDND1-201ENST00000341181 KRTAP10-5P60370 271 aa8.59□□□□□ -1.03
CLDND1-201ENST00000341181 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
CLDND1-201ENST00000341181 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
CLDND1-201ENST00000341181 KRTAP25-1Q3LHN0 102 aa8.48□□□□□ -1.05
CLDND1-201ENST00000341181 PRO2289Q9P1D8 64 aa8.46□□□□□ -1.06
CLDND1-201ENST00000341181 KRTAP9-6A0A140TA67 174 aa8.43□□□□□ -1.06
CLDND1-201ENST00000341181 KMT2DO14686 5537 aa8.29□□□□□ -1.08
CLDND1-201ENST00000341181 KRTAP10-7P60409 375 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-201ENST00000341181 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
CLDND1-201ENST00000341181 TNP1P09430 55 aa8.15□□□□□ -1.1
CLDND1-201ENST00000341181 KRTAP10-12P60413 245 aa8.14□□□□□ -1.11
CLDND1-201ENST00000341181 KRTAP4-8A0A0G2JLE6 195 aa8.07□□□□□ -1.12
CLDND1-201ENST00000341181 KRTAP4-8Q9BYQ9 185 aa8.07□□□□□ -1.12
CLDND1-201ENST00000341181 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.12
CLDND1-201ENST00000341181 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.02□□□□□ -1.13
CLDND1-201ENST00000341181 LCE3AQ5TA76 89 aa7.92□□□□□ -1.14
CLDND1-201ENST00000341181 PP632Q6XCG6 107 aa7.9□□□□□ -1.14
CLDND1-201ENST00000341181 KRTAP8-1Q8IUC2 63 aa7.86□□□□□ -1.15
CLDND1-201ENST00000341181 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
CLDND1-201ENST00000341181 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
CLDND1-201ENST00000341181 KRTAP19-5Q3LI72 72 aa7.7□□□□□ -1.18
CLDND1-201ENST00000341181 KRTAP19-7Q3SYF9 63 aa7.7□□□□□ -1.18
CLDND1-201ENST00000341181 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
CLDND1-201ENST00000341181 KRTAP9-7A8MTY7 169 aa7.68□□□□□ -1.18
CLDND1-201ENST00000341181 KRTAP5-9P26371 169 aa7.68□□□□□ -1.18
CLDND1-201ENST00000341181 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
CLDND1-201ENST00000341181 MDN1Q9NU22 5596 aa7.66□□□□□ -1.18
CLDND1-201ENST00000341181 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
CLDND1-201ENST00000341181 MT1EP04732 61 aa7.57□□□□□ -1.2
CLDND1-201ENST00000341181 KRTAP12-3P60328 96 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms