RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 HSPG2P98160 4391 aa8.22□□□□□ -1.09
LIMK2-203ENST00000340552 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
LIMK2-203ENST00000340552 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
LIMK2-203ENST00000340552 C20orf166-AS1Q96NR2 134 aa8.19□□□□□ -1.1
LIMK2-203ENST00000340552 RYR1P21817 5038 aa8.18□□□□□ -1.1
LIMK2-203ENST00000340552 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
LIMK2-203ENST00000340552 Q5VSD8 79 aa8.16□□□□□ -1.1
LIMK2-203ENST00000340552 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
LIMK2-203ENST00000340552 RPL37P61927 97 aaKnown RBP8.1□□□□□ -1.11
LIMK2-203ENST00000340552 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
LIMK2-203ENST00000340552 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
LIMK2-203ENST00000340552 KRTAP17-1Q9BYP8 105 aa8.06□□□□□ -1.12
LIMK2-203ENST00000340552 EPPK1P58107 5090 aaKnown RBP8.06□□□□□ -1.12
LIMK2-203ENST00000340552 TNXBP22105 4242 aa8.05□□□□□ -1.12
LIMK2-203ENST00000340552 KRTAP13-4Q3LI77 160 aa8.05□□□□□ -1.12
LIMK2-203ENST00000340552 DMBT1Q9UGM3 2413 aaPredicted RBP8.04□□□□□ -1.12
LIMK2-203ENST00000340552 A0A0D9SG42 100 aa8.04□□□□□ -1.12
LIMK2-203ENST00000340552 KRTAP10-8P60410 259 aa8.02□□□□□ -1.13
LIMK2-203ENST00000340552 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
LIMK2-203ENST00000340552 KRTAP10-6P60371 365 aaPredicted RBP7.99□□□□□ -1.13
LIMK2-203ENST00000340552 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
LIMK2-203ENST00000340552 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
LIMK2-203ENST00000340552 MYCBP2O75592 4640 aa7.92□□□□□ -1.14
LIMK2-203ENST00000340552 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
LIMK2-203ENST00000340552 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
LIMK2-203ENST00000340552 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
LIMK2-203ENST00000340552 S4R3F8 94 aa7.85□□□□□ -1.15
LIMK2-203ENST00000340552 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
LIMK2-203ENST00000340552 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
LIMK2-203ENST00000340552 XP32Q5T750 250 aa7.72□□□□□ -1.17
LIMK2-203ENST00000340552 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
LIMK2-203ENST00000340552 LUZP6Q538Z0 58 aa7.67□□□□□ -1.18
LIMK2-203ENST00000340552 ABCA13Q86UQ4 5058 aa7.66□□□□□ -1.18
LIMK2-203ENST00000340552 BIRC6Q9NR09 4857 aa7.64□□□□□ -1.19
LIMK2-203ENST00000340552 HERC2O95714 4834 aa7.61□□□□□ -1.19
LIMK2-203ENST00000340552 J3QL48 77 aa7.54□□□□□ -1.2
LIMK2-203ENST00000340552 LRP2P98164 4655 aa7.54□□□□□ -1.2
LIMK2-203ENST00000340552 LPAP08519 4548 aa7.53□□□□□ -1.2
LIMK2-203ENST00000340552 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
LIMK2-203ENST00000340552 M0QZ58 72 aa7.39□□□□□ -1.23
LIMK2-203ENST00000340552 SEC61BP60468 96 aaKnown RBP7.31□□□□□ -1.24
LIMK2-203ENST00000340552 PCLOQ9Y6V0 5065 aa7.3□□□□□ -1.24
LIMK2-203ENST00000340552 HERC1Q15751 4861 aa7.23□□□□□ -1.25
LIMK2-203ENST00000340552 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
LIMK2-203ENST00000340552 KRTAP4-1Q9BYQ7 146 aa7.19□□□□□ -1.26
LIMK2-203ENST00000340552 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
LIMK2-203ENST00000340552 R4GN34 69 aa7.12□□□□□ -1.27
LIMK2-203ENST00000340552 PP632Q6XCG6 107 aa7.03□□□□□ -1.28
LIMK2-203ENST00000340552 MUC2Q02817 5179 aa7.03□□□□□ -1.28
LIMK2-203ENST00000340552 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
LIMK2-203ENST00000340552 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
LIMK2-203ENST00000340552 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
LIMK2-203ENST00000340552 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
LIMK2-203ENST00000340552 CAMK2N1Q7Z7J9 78 aa6.84□□□□□ -1.31
LIMK2-203ENST00000340552 UBR4Q5T4S7 5183 aa6.81□□□□□ -1.32
LIMK2-203ENST00000340552 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
LIMK2-203ENST00000340552 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
LIMK2-203ENST00000340552 FAT4Q6V0I7 4981 aa6.74□□□□□ -1.33
LIMK2-203ENST00000340552 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
LIMK2-203ENST00000340552 TNP1P09430 55 aa6.64□□□□□ -1.35
LIMK2-203ENST00000340552 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
LIMK2-203ENST00000340552 MT1HP80294 61 aa6.61□□□□□ -1.35
LIMK2-203ENST00000340552 M0R2T5 61 aa6.6□□□□□ -1.35
LIMK2-203ENST00000340552 INE1O15225 51 aa6.49□□□□□ -1.37
LIMK2-203ENST00000340552 MT2AP02795 61 aa6.4□□□□□ -1.38
LIMK2-203ENST00000340552 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
LIMK2-203ENST00000340552 MT1FP04733 61 aa6.38□□□□□ -1.39
LIMK2-203ENST00000340552 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
LIMK2-203ENST00000340552 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
LIMK2-203ENST00000340552 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
LIMK2-203ENST00000340552 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
LIMK2-203ENST00000340552 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
LIMK2-203ENST00000340552 KRTAP19-8Q3LI54 63 aa6.15□□□□□ -1.42
LIMK2-203ENST00000340552 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
LIMK2-203ENST00000340552 MT1BP07438 61 aa6.08□□□□□ -1.44
LIMK2-203ENST00000340552 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
LIMK2-203ENST00000340552 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
LIMK2-203ENST00000340552 LCE2BO14633 110 aa5.96□□□□□ -1.45
LIMK2-203ENST00000340552 MT1XP80297 61 aa5.94□□□□□ -1.46
LIMK2-203ENST00000340552 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
LIMK2-203ENST00000340552 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
LIMK2-203ENST00000340552 USH2AO75445 5202 aa5.84□□□□□ -1.47
LIMK2-203ENST00000340552 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
LIMK2-203ENST00000340552 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
LIMK2-203ENST00000340552 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
LIMK2-203ENST00000340552 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
LIMK2-203ENST00000340552 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
LIMK2-203ENST00000340552 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
LIMK2-203ENST00000340552 KMT2DO14686 5537 aa5.53□□□□□ -1.52
LIMK2-203ENST00000340552 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
LIMK2-203ENST00000340552 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
LIMK2-203ENST00000340552 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
LIMK2-203ENST00000340552 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms