RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 TPRXLQ17RH7 258 aa10.5□□□□□ -0.73
UBC-201ENST00000339647 RYR3Q15413 4870 aa10.5□□□□□ -0.73
UBC-201ENST00000339647 DMBT1Q9UGM3 2413 aaPredicted RBP10.48□□□□□ -0.73
UBC-201ENST00000339647 PKHD1L1Q86WI1 4243 aa10.46□□□□□ -0.73
UBC-201ENST00000339647 APOBP04114 4563 aaKnown RBP10.45□□□□□ -0.74
UBC-201ENST00000339647 SPINT4Q6UDR6 99 aa10.43□□□□□ -0.74
UBC-201ENST00000339647 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
UBC-201ENST00000339647 C10orf95Q9H7T3 257 aa10.42□□□□□ -0.74
UBC-201ENST00000339647 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
UBC-201ENST00000339647 A0A1B0GVY2 172 aa10.31□□□□□ -0.76
UBC-201ENST00000339647 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
UBC-201ENST00000339647 KRTAP10-4P60372 401 aaPredicted RBP10.25□□□□□ -0.77
UBC-201ENST00000339647 KRTAP10-8P60410 259 aa10.22□□□□□ -0.77
UBC-201ENST00000339647 KRTAP15-1Q3LI76 137 aa10.22□□□□□ -0.77
UBC-201ENST00000339647 S4R3F8 94 aa10.22□□□□□ -0.77
UBC-201ENST00000339647 KIAA1109Q2LD37 5005 aa10.21□□□□□ -0.77
UBC-201ENST00000339647 KRTAP12-2P59991 146 aa10.21□□□□□ -0.78
UBC-201ENST00000339647 NDUFAF8A1L188 74 aa10.2□□□□□ -0.78
UBC-201ENST00000339647 HSPG2P98160 4391 aa10.17□□□□□ -0.78
UBC-201ENST00000339647 EPPK1P58107 5090 aaKnown RBP10.16□□□□□ -0.78
UBC-201ENST00000339647 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
UBC-201ENST00000339647 MYCBP2O75592 4640 aa10.12□□□□□ -0.79
UBC-201ENST00000339647 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
UBC-201ENST00000339647 KRTAP12-1P59990 96 aa10.07□□□□□ -0.8
UBC-201ENST00000339647 RYR1P21817 5038 aa10.04□□□□□ -0.8
UBC-201ENST00000339647 XP32Q5T750 250 aa9.99□□□□□ -0.81
UBC-201ENST00000339647 TNXBP22105 4242 aa9.97□□□□□ -0.81
UBC-201ENST00000339647 Q5VSD8 79 aa9.9□□□□□ -0.82
UBC-201ENST00000339647 LPAP08519 4548 aa9.79□□□□□ -0.84
UBC-201ENST00000339647 M0QZ58 72 aa9.79□□□□□ -0.84
UBC-201ENST00000339647 ABCA13Q86UQ4 5058 aa9.75□□□□□ -0.85
UBC-201ENST00000339647 KRTAP4-5Q9BYR2 181 aa9.69□□□□□ -0.86
UBC-201ENST00000339647 LRP2P98164 4655 aa9.59□□□□□ -0.87
UBC-201ENST00000339647 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
UBC-201ENST00000339647 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
UBC-201ENST00000339647 R4GN34 69 aa9.52□□□□□ -0.89
UBC-201ENST00000339647 HERC2O95714 4834 aa9.48□□□□□ -0.89
UBC-201ENST00000339647 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
UBC-201ENST00000339647 LUZP6Q538Z0 58 aa9.28□□□□□ -0.92
UBC-201ENST00000339647 MUC2Q02817 5179 aa9.26□□□□□ -0.93
UBC-201ENST00000339647 PCLOQ9Y6V0 5065 aa9.26□□□□□ -0.93
UBC-201ENST00000339647 A0A0A0MQY5 61 aa9.25□□□□□ -0.93
UBC-201ENST00000339647 HERC1Q15751 4861 aa9.24□□□□□ -0.93
UBC-201ENST00000339647 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
UBC-201ENST00000339647 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
UBC-201ENST00000339647 J3QL48 77 aa9.11□□□□□ -0.95
UBC-201ENST00000339647 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
UBC-201ENST00000339647 MUC17Q685J3 4493 aa9.11□□□□□ -0.95
UBC-201ENST00000339647 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
UBC-201ENST00000339647 SEC61BP60468 96 aaKnown RBP8.95□□□□□ -0.98
UBC-201ENST00000339647 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
UBC-201ENST00000339647 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
UBC-201ENST00000339647 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
UBC-201ENST00000339647 FAT4Q6V0I7 4981 aa8.8□□□□□ -1
UBC-201ENST00000339647 TNP1P09430 55 aa8.79□□□□□ -1
UBC-201ENST00000339647 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
UBC-201ENST00000339647 SPRR5A0A1B0GTR4 108 aa8.75□□□□□ -1.01
UBC-201ENST00000339647 KRTAP23-1A1A580 65 aa8.65□□□□□ -1.02
UBC-201ENST00000339647 FLGP20930 4061 aaPredicted RBP8.6□□□□□ -1.03
UBC-201ENST00000339647 LCE3AQ5TA76 89 aa8.35□□□□□ -1.07
UBC-201ENST00000339647 KRTAP19-1Q8IUB9 90 aa8.26□□□□□ -1.09
UBC-201ENST00000339647 SPRR2GQ9BYE4 73 aa8.26□□□□□ -1.09
UBC-201ENST00000339647 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
UBC-201ENST00000339647 PRO2289Q9P1D8 64 aa8.21□□□□□ -1.09
UBC-201ENST00000339647 M0R2T5 61 aa8.11□□□□□ -1.11
UBC-201ENST00000339647 KRTAP8-1Q8IUC2 63 aa8.05□□□□□ -1.12
UBC-201ENST00000339647 MT1HP80294 61 aa8.04□□□□□ -1.12
UBC-201ENST00000339647 INE1O15225 51 aa8.03□□□□□ -1.12
UBC-201ENST00000339647 MT1FP04733 61 aa7.93□□□□□ -1.14
UBC-201ENST00000339647 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
UBC-201ENST00000339647 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
UBC-201ENST00000339647 MT2AP02795 61 aa7.87□□□□□ -1.15
UBC-201ENST00000339647 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
UBC-201ENST00000339647 MT1XP80297 61 aa7.82□□□□□ -1.16
UBC-201ENST00000339647 KRTAP10-12P60413 245 aa7.81□□□□□ -1.16
UBC-201ENST00000339647 KRTAP9-8Q9BYQ0 159 aa7.8□□□□□ -1.16
UBC-201ENST00000339647 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
UBC-201ENST00000339647 USH2AO75445 5202 aa7.77□□□□□ -1.17
UBC-201ENST00000339647 MT1BP07438 61 aa7.75□□□□□ -1.17
UBC-201ENST00000339647 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
UBC-201ENST00000339647 FSIP2Q5CZC0 6907 aa7.51□□□□□ -1.21
UBC-201ENST00000339647 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.21
UBC-201ENST00000339647 LCE3CQ5T5A8 94 aa7.44□□□□□ -1.22
UBC-201ENST00000339647 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
UBC-201ENST00000339647 LCE2AQ5TA79 106 aaPredicted RBP7.38□□□□□ -1.23
UBC-201ENST00000339647 KMT2DO14686 5537 aa7.38□□□□□ -1.23
UBC-201ENST00000339647 LCE2BO14633 110 aa7.34□□□□□ -1.24
UBC-201ENST00000339647 KRTAP9-6A8MVA2 160 aa7.31□□□□□ -1.24
UBC-201ENST00000339647 KRTAP4-8A0A0G2JLE6 195 aa7.16□□□□□ -1.26
UBC-201ENST00000339647 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
UBC-201ENST00000339647 KRTAP2-3P0C7H8 128 aa7.12□□□□□ -1.27
UBC-201ENST00000339647 KRTAP2-4Q9BYR9 128 aa7.12□□□□□ -1.27
UBC-201ENST00000339647 KRTAP2-1Q9BYU5 128 aa7.12□□□□□ -1.27
UBC-201ENST00000339647 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
UBC-201ENST00000339647 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
UBC-201ENST00000339647 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.29
UBC-201ENST00000339647 MT1LQ93083 61 aa6.78□□□□□ -1.32
UBC-201ENST00000339647 MT1EP04732 61 aa6.7□□□□□ -1.34
UBC-201ENST00000339647 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
UBC-201ENST00000339647 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms