RNA–Protein interactions for RNA: ENST00000339089.10

PHF20-201, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 1,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-201ENST00000339089 CRCT1Q9UGL9 99 aa6□□□□□ -1.45
PHF20-201ENST00000339089 S4R3F8 94 aa5.99□□□□□ -1.45
PHF20-201ENST00000339089 MP68P56378 58 aa5.97□□□□□ -1.45
PHF20-201ENST00000339089 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
PHF20-201ENST00000339089 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
PHF20-201ENST00000339089 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
PHF20-201ENST00000339089 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
PHF20-201ENST00000339089 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
PHF20-201ENST00000339089 H3BPC8 53 aa5.94□□□□□ -1.46
PHF20-201ENST00000339089 CSAG1Q6PB30 78 aa5.92□□□□□ -1.46
PHF20-201ENST00000339089 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
PHF20-201ENST00000339089 SMIM20Q8N5G0 67 aa5.91□□□□□ -1.46
PHF20-201ENST00000339089 A8MUN3 132 aa5.87□□□□□ -1.47
PHF20-201ENST00000339089 KRTAP19-1Q8IUB9 90 aa5.84□□□□□ -1.48
PHF20-201ENST00000339089 COX7CP15954 63 aa5.82□□□□□ -1.48
PHF20-201ENST00000339089 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
PHF20-201ENST00000339089 NDUFC1O43677 76 aa5.8□□□□□ -1.48
PHF20-201ENST00000339089 FCGBPQ9Y6R7 5405 aaPredicted RBP5.79□□□□□ -1.48
PHF20-201ENST00000339089 CYSTM1Q9H1C7 97 aa5.79□□□□□ -1.48
PHF20-201ENST00000339089 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
PHF20-201ENST00000339089 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
PHF20-201ENST00000339089 SPRR2GQ9BYE4 73 aa5.76□□□□□ -1.49
PHF20-201ENST00000339089 H0YAA0 97 aa5.75□□□□□ -1.49
PHF20-201ENST00000339089 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
PHF20-201ENST00000339089 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
PHF20-201ENST00000339089 KRTAP19-6Q3LI70 58 aa5.71□□□□□ -1.49
PHF20-201ENST00000339089 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
PHF20-201ENST00000339089 MT1BP07438 61 aa5.7□□□□□ -1.5
PHF20-201ENST00000339089 TMEM258P61165 79 aa5.7□□□□□ -1.5
PHF20-201ENST00000339089 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
PHF20-201ENST00000339089 ACYP2P14621 99 aa5.67□□□□□ -1.5
PHF20-201ENST00000339089 SPANXA2-OT1Q8N9U9 137 aa5.66□□□□□ -1.5
PHF20-201ENST00000339089 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
PHF20-201ENST00000339089 P0C880 135 aa5.63□□□□□ -1.51
PHF20-201ENST00000339089 Q5VV11 94 aa5.6□□□□□ -1.51
PHF20-201ENST00000339089 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
PHF20-201ENST00000339089 H7BZZ5 65 aa5.58□□□□□ -1.52
PHF20-201ENST00000339089 MACF1Q9UPN3 7388 aaKnown RBP5.55□□□□□ -1.52
PHF20-201ENST00000339089 SERP1Q9Y6X1 66 aa5.53□□□□□ -1.52
PHF20-201ENST00000339089 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
PHF20-201ENST00000339089 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
PHF20-201ENST00000339089 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
PHF20-201ENST00000339089 COA5Q86WW8 74 aa5.49□□□□□ -1.53
PHF20-201ENST00000339089 R4GN34 69 aa5.47□□□□□ -1.53
PHF20-201ENST00000339089 SYNE2Q8WXH0 6885 aaKnown RBP5.47□□□□□ -1.53
PHF20-201ENST00000339089 A6NN06 94 aa5.46□□□□□ -1.54
PHF20-201ENST00000339089 M0QZ58 72 aa5.46□□□□□ -1.54
PHF20-201ENST00000339089 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
PHF20-201ENST00000339089 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
PHF20-201ENST00000339089 ATP5EP56381 51 aaPredicted RBP5.44□□□□□ -1.54
PHF20-201ENST00000339089 PRO0628Q9UI54 55 aa5.4□□□□□ -1.55
PHF20-201ENST00000339089 MT1XP80297 61 aa5.38□□□□□ -1.55
PHF20-201ENST00000339089 KRTAP13-4Q3LI77 160 aa5.36□□□□□ -1.55
PHF20-201ENST00000339089 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
PHF20-201ENST00000339089 KRTAP4-8Q9BYQ9 185 aa5.35□□□□□ -1.55
PHF20-201ENST00000339089 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
PHF20-201ENST00000339089 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
PHF20-201ENST00000339089 BRK1Q8WUW1 75 aa5.28□□□□□ -1.56
PHF20-201ENST00000339089 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
PHF20-201ENST00000339089 Q1T7F1 81 aa5.25□□□□□ -1.57
PHF20-201ENST00000339089 KMT2DO14686 5537 aa5.23□□□□□ -1.57
PHF20-201ENST00000339089 SEC61GP60059 68 aa5.22□□□□□ -1.57
PHF20-201ENST00000339089 A0A1B0GU33 70 aa5.2□□□□□ -1.58
PHF20-201ENST00000339089 SPATA8Q6RVD6 105 aa5.2□□□□□ -1.58
PHF20-201ENST00000339089 KRTAP12-2P59991 146 aa5.18□□□□□ -1.58
PHF20-201ENST00000339089 PSPHP1O15172 72 aa5.16□□□□□ -1.58
PHF20-201ENST00000339089 A0A1B0GU69 56 aa5.15□□□□□ -1.58
PHF20-201ENST00000339089 KRTAP5-9P26371 169 aa5.15□□□□□ -1.58
PHF20-201ENST00000339089 MUC12Q9UKN1 5478 aa5.15□□□□□ -1.58
PHF20-201ENST00000339089 NEBP20929 6669 aa5.14□□□□□ -1.59
PHF20-201ENST00000339089 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
PHF20-201ENST00000339089 A0A0D9SG42 100 aa5.13□□□□□ -1.59
PHF20-201ENST00000339089 LINC01558Q9Y6Z2 57 aa5.11□□□□□ -1.59
PHF20-201ENST00000339089 V9GYY9 64 aa5.11□□□□□ -1.59
PHF20-201ENST00000339089 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
PHF20-201ENST00000339089 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
PHF20-201ENST00000339089 A8MU10 97 aa5.1□□□□□ -1.59
PHF20-201ENST00000339089 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
PHF20-201ENST00000339089 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
PHF20-201ENST00000339089 PMAIP1Q13794 54 aa5.06□□□□□ -1.6
PHF20-201ENST00000339089 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
PHF20-201ENST00000339089 CAMK2N1Q7Z7J9 78 aa5.04□□□□□ -1.6
PHF20-201ENST00000339089 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
PHF20-201ENST00000339089 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
PHF20-201ENST00000339089 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
PHF20-201ENST00000339089 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
PHF20-201ENST00000339089 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
PHF20-201ENST00000339089 A6NED7 52 aa4.95□□□□□ -1.62
PHF20-201ENST00000339089 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
PHF20-201ENST00000339089 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
PHF20-201ENST00000339089 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
PHF20-201ENST00000339089 KTN1-AS1Q86SY8 53 aa4.93□□□□□ -1.62
PHF20-201ENST00000339089 UQCR11O14957 56 aa4.89□□□□□ -1.63
PHF20-201ENST00000339089 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
PHF20-201ENST00000339089 C10orf95Q9H7T3 257 aa4.87□□□□□ -1.63
PHF20-201ENST00000339089 SPRR2EP22531 72 aa4.87□□□□□ -1.63
PHF20-201ENST00000339089 SPRR2BP35325 72 aa4.87□□□□□ -1.63
PHF20-201ENST00000339089 SPRR2AP35326 72 aa4.87□□□□□ -1.63
PHF20-201ENST00000339089 KRTAP19-7Q3SYF9 63 aa4.82□□□□□ -1.64
PHF20-201ENST00000339089 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms