RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 FAT2Q9NYQ8 4349 aa5.68□□□□□ -1.5
SEC23B-202ENST00000336714 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
SEC23B-202ENST00000336714 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
SEC23B-202ENST00000336714 KRTAP10-8P60410 259 aa5.6□□□□□ -1.51
SEC23B-202ENST00000336714 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
SEC23B-202ENST00000336714 MYCBP2O75592 4640 aa5.57□□□□□ -1.52
SEC23B-202ENST00000336714 FAT1Q14517 4588 aa5.56□□□□□ -1.52
SEC23B-202ENST00000336714 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
SEC23B-202ENST00000336714 XP32Q5T750 250 aa5.51□□□□□ -1.53
SEC23B-202ENST00000336714 HYDINQ4G0P3 5121 aa5.5□□□□□ -1.53
SEC23B-202ENST00000336714 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
SEC23B-202ENST00000336714 PKD1P98161 4303 aa5.5□□□□□ -1.53
SEC23B-202ENST00000336714 RPS29P62273 56 aaKnown RBP5.46□□□□□ -1.53
SEC23B-202ENST00000336714 M0QZ58 72 aa5.42□□□□□ -1.54
SEC23B-202ENST00000336714 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
SEC23B-202ENST00000336714 HSPG2P98160 4391 aa5.4□□□□□ -1.54
SEC23B-202ENST00000336714 DYNC1H1Q14204 4646 aaKnown RBP5.4□□□□□ -1.54
SEC23B-202ENST00000336714 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
SEC23B-202ENST00000336714 SACSQ9NZJ4 4579 aa5.36□□□□□ -1.55
SEC23B-202ENST00000336714 R4GN34 69 aa5.35□□□□□ -1.55
SEC23B-202ENST00000336714 LPAP08519 4548 aa5.31□□□□□ -1.56
SEC23B-202ENST00000336714 PKHD1L1Q86WI1 4243 aa5.28□□□□□ -1.56
SEC23B-202ENST00000336714 FAT3Q8TDW7 4589 aa5.26□□□□□ -1.57
SEC23B-202ENST00000336714 LORP23490 312 aaPredicted RBP5.22□□□□□ -1.57
SEC23B-202ENST00000336714 CAMK2N1Q7Z7J9 78 aa5.21□□□□□ -1.58
SEC23B-202ENST00000336714 KRTAP10-4P60372 401 aaPredicted RBP5.21□□□□□ -1.58
SEC23B-202ENST00000336714 LRP2P98164 4655 aa5.18□□□□□ -1.58
SEC23B-202ENST00000336714 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
SEC23B-202ENST00000336714 KMT2CQ8NEZ4 4911 aaKnown RBP5.17□□□□□ -1.58
SEC23B-202ENST00000336714 RYR3Q15413 4870 aa5.08□□□□□ -1.6
SEC23B-202ENST00000336714 RYR2Q92736 4967 aa5.07□□□□□ -1.6
SEC23B-202ENST00000336714 Q5VSD8 79 aa5.05□□□□□ -1.6
SEC23B-202ENST00000336714 TNXBP22105 4242 aa5.05□□□□□ -1.6
SEC23B-202ENST00000336714 PP632Q6XCG6 107 aa5□□□□□ -1.61
SEC23B-202ENST00000336714 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
SEC23B-202ENST00000336714 A0A1B0GVY2 172 aa4.99□□□□□ -1.61
SEC23B-202ENST00000336714 RYR1P21817 5038 aa4.97□□□□□ -1.61
SEC23B-202ENST00000336714 EPPK1P58107 5090 aaKnown RBP4.94□□□□□ -1.62
SEC23B-202ENST00000336714 TNP1P09430 55 aa4.9□□□□□ -1.63
SEC23B-202ENST00000336714 KRTAP17-1Q9BYP8 105 aa4.88□□□□□ -1.63
SEC23B-202ENST00000336714 MT1HL1P0DM35 61 aa4.84□□□□□ -1.63
SEC23B-202ENST00000336714 KIAA1109Q2LD37 5005 aa4.84□□□□□ -1.63
SEC23B-202ENST00000336714 MUC2Q02817 5179 aa4.82□□□□□ -1.64
SEC23B-202ENST00000336714 ABCA13Q86UQ4 5058 aa4.8□□□□□ -1.64
SEC23B-202ENST00000336714 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
SEC23B-202ENST00000336714 KRTAP4-1Q9BYQ7 146 aa4.77□□□□□ -1.65
SEC23B-202ENST00000336714 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
SEC23B-202ENST00000336714 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
SEC23B-202ENST00000336714 HERC2O95714 4834 aa4.75□□□□□ -1.65
SEC23B-202ENST00000336714 J3QL48 77 aa4.74□□□□□ -1.65
SEC23B-202ENST00000336714 PCLOQ9Y6V0 5065 aa4.69□□□□□ -1.66
SEC23B-202ENST00000336714 LCE3AQ5TA76 89 aa4.65□□□□□ -1.67
SEC23B-202ENST00000336714 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
SEC23B-202ENST00000336714 INE1O15225 51 aa4.57□□□□□ -1.68
SEC23B-202ENST00000336714 M0R2T5 61 aa4.54□□□□□ -1.68
SEC23B-202ENST00000336714 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
SEC23B-202ENST00000336714 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
SEC23B-202ENST00000336714 KRTAP19-2Q3LHN2 52 aa4.49□□□□□ -1.69
SEC23B-202ENST00000336714 HERC1Q15751 4861 aa4.47□□□□□ -1.69
SEC23B-202ENST00000336714 FLGP20930 4061 aaPredicted RBP4.4□□□□□ -1.7
SEC23B-202ENST00000336714 HMCN2Q8NDA2 5059 aa4.39□□□□□ -1.71
SEC23B-202ENST00000336714 KRTAP12-3P60328 96 aa4.35□□□□□ -1.71
SEC23B-202ENST00000336714 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
SEC23B-202ENST00000336714 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
SEC23B-202ENST00000336714 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
SEC23B-202ENST00000336714 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
SEC23B-202ENST00000336714 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
SEC23B-202ENST00000336714 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
SEC23B-202ENST00000336714 KRTAP10-12P60413 245 aa4.25□□□□□ -1.73
SEC23B-202ENST00000336714 KMT2DO14686 5537 aa4.2□□□□□ -1.74
SEC23B-202ENST00000336714 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
SEC23B-202ENST00000336714 MT1FP04733 61 aa4.17□□□□□ -1.74
SEC23B-202ENST00000336714 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
SEC23B-202ENST00000336714 MT1XP80297 61 aa4.14□□□□□ -1.75
SEC23B-202ENST00000336714 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
SEC23B-202ENST00000336714 MT2AP02795 61 aa4.1□□□□□ -1.75
SEC23B-202ENST00000336714 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
SEC23B-202ENST00000336714 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
SEC23B-202ENST00000336714 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
SEC23B-202ENST00000336714 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
SEC23B-202ENST00000336714 MT1BP07438 61 aa4.05□□□□□ -1.76
SEC23B-202ENST00000336714 USH2AO75445 5202 aa4.04□□□□□ -1.76
SEC23B-202ENST00000336714 MT1HP80294 61 aa4.04□□□□□ -1.76
SEC23B-202ENST00000336714 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SEC23B-202ENST00000336714 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SEC23B-202ENST00000336714 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SEC23B-202ENST00000336714 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
SEC23B-202ENST00000336714 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
SEC23B-202ENST00000336714 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
SEC23B-202ENST00000336714 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
SEC23B-202ENST00000336714 CRCT1Q9UGL9 99 aa3.88□□□□□ -1.79
SEC23B-202ENST00000336714 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
SEC23B-202ENST00000336714 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
SEC23B-202ENST00000336714 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.8
SEC23B-202ENST00000336714 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.8
SEC23B-202ENST00000336714 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.8
SEC23B-202ENST00000336714 KRTAP9-6A0A140TA67 174 aa3.83□□□□□ -1.8
SEC23B-202ENST00000336714 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
SEC23B-202ENST00000336714 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
SEC23B-202ENST00000336714 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms