RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 H1FX-AS1Q4G0G2 97 aa6.8□□□□□ -1.32
TUBA1B-202ENST00000336023 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
TUBA1B-202ENST00000336023 BRK1Q8WUW1 75 aa6.75□□□□□ -1.33
TUBA1B-202ENST00000336023 V9GYY9 64 aa6.74□□□□□ -1.33
TUBA1B-202ENST00000336023 M0R2T5 61 aa6.72□□□□□ -1.33
TUBA1B-202ENST00000336023 A8MUN3 132 aa6.72□□□□□ -1.33
TUBA1B-202ENST00000336023 Q1T7F1 81 aa6.71□□□□□ -1.34
TUBA1B-202ENST00000336023 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
TUBA1B-202ENST00000336023 SPANXA2-OT1Q8N9U9 137 aa6.68□□□□□ -1.34
TUBA1B-202ENST00000336023 S4R3F8 94 aa6.67□□□□□ -1.34
TUBA1B-202ENST00000336023 LCA10Q71F78 164 aa6.64□□□□□ -1.35
TUBA1B-202ENST00000336023 ACYP2P14621 99 aa6.61□□□□□ -1.35
TUBA1B-202ENST00000336023 KRTAP10-6P60371 365 aaPredicted RBP6.61□□□□□ -1.35
TUBA1B-202ENST00000336023 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
TUBA1B-202ENST00000336023 LORP23490 312 aaPredicted RBP6.58□□□□□ -1.36
TUBA1B-202ENST00000336023 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
TUBA1B-202ENST00000336023 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
TUBA1B-202ENST00000336023 PSPHP1O15172 72 aa6.54□□□□□ -1.36
TUBA1B-202ENST00000336023 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
TUBA1B-202ENST00000336023 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
TUBA1B-202ENST00000336023 COA5Q86WW8 74 aa6.47□□□□□ -1.37
TUBA1B-202ENST00000336023 PRR15LQ9BU68 103 aa6.47□□□□□ -1.37
TUBA1B-202ENST00000336023 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
TUBA1B-202ENST00000336023 Q5VV11 94 aa6.47□□□□□ -1.37
TUBA1B-202ENST00000336023 MT2AP02795 61 aa6.46□□□□□ -1.38
TUBA1B-202ENST00000336023 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
TUBA1B-202ENST00000336023 MT1FP04733 61 aa6.42□□□□□ -1.38
TUBA1B-202ENST00000336023 A6NED7 52 aa6.4□□□□□ -1.38
TUBA1B-202ENST00000336023 KRTAP10-10P60014 251 aa6.4□□□□□ -1.38
TUBA1B-202ENST00000336023 LINC01558Q9Y6Z2 57 aa6.39□□□□□ -1.39
TUBA1B-202ENST00000336023 H0YAA0 97 aa6.37□□□□□ -1.39
TUBA1B-202ENST00000336023 SEC61GP60059 68 aa6.37□□□□□ -1.39
TUBA1B-202ENST00000336023 CDC42SE1Q9NRR8 79 aa6.36□□□□□ -1.39
TUBA1B-202ENST00000336023 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.39
TUBA1B-202ENST00000336023 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
TUBA1B-202ENST00000336023 KRTAP9-3Q9BYQ3 159 aa6.29□□□□□ -1.4
TUBA1B-202ENST00000336023 P0C880 135 aa6.26□□□□□ -1.41
TUBA1B-202ENST00000336023 A6NN06 94 aa6.22□□□□□ -1.41
TUBA1B-202ENST00000336023 CRIPTQ9P021 101 aa6.21□□□□□ -1.41
TUBA1B-202ENST00000336023 A8MU10 97 aa6.21□□□□□ -1.42
TUBA1B-202ENST00000336023 KRTAP9-2Q9BYQ4 174 aa6.2□□□□□ -1.42
TUBA1B-202ENST00000336023 KRTAP19-1Q8IUB9 90 aa6.18□□□□□ -1.42
TUBA1B-202ENST00000336023 LCE2BO14633 110 aa6.17□□□□□ -1.42
TUBA1B-202ENST00000336023 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
TUBA1B-202ENST00000336023 A0A1B0GU69 56 aa6.16□□□□□ -1.42
TUBA1B-202ENST00000336023 USH2AO75445 5202 aa6.14□□□□□ -1.43
TUBA1B-202ENST00000336023 R4GN34 69 aa6.14□□□□□ -1.43
TUBA1B-202ENST00000336023 M0QZ58 72 aa6.11□□□□□ -1.43
TUBA1B-202ENST00000336023 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
TUBA1B-202ENST00000336023 UQCR11O14957 56 aa6.07□□□□□ -1.44
TUBA1B-202ENST00000336023 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
TUBA1B-202ENST00000336023 SPATA8Q6RVD6 105 aa6.06□□□□□ -1.44
TUBA1B-202ENST00000336023 A0A1B0GU33 70 aa6.05□□□□□ -1.44
TUBA1B-202ENST00000336023 MIR22HGQ0VDD5 57 aa6.04□□□□□ -1.44
TUBA1B-202ENST00000336023 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
TUBA1B-202ENST00000336023 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
TUBA1B-202ENST00000336023 MT1BP07438 61 aa6□□□□□ -1.45
TUBA1B-202ENST00000336023 SSPOA2VEC9 5147 aa6□□□□□ -1.45
TUBA1B-202ENST00000336023 CRCT1Q9UGL9 99 aa5.93□□□□□ -1.46
TUBA1B-202ENST00000336023 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
TUBA1B-202ENST00000336023 A0A0D9SG42 100 aa5.89□□□□□ -1.47
TUBA1B-202ENST00000336023 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
TUBA1B-202ENST00000336023 PRAC1Q96KF2 57 aa5.86□□□□□ -1.47
TUBA1B-202ENST00000336023 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
TUBA1B-202ENST00000336023 FCGBPQ9Y6R7 5405 aaPredicted RBP5.8□□□□□ -1.48
TUBA1B-202ENST00000336023 K7ERS5 55 aa5.77□□□□□ -1.48
TUBA1B-202ENST00000336023 KRTAP12-1P59990 96 aa5.77□□□□□ -1.48
TUBA1B-202ENST00000336023 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.48
TUBA1B-202ENST00000336023 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
TUBA1B-202ENST00000336023 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
TUBA1B-202ENST00000336023 MT1XP80297 61 aa5.74□□□□□ -1.49
TUBA1B-202ENST00000336023 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
TUBA1B-202ENST00000336023 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.5
TUBA1B-202ENST00000336023 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
TUBA1B-202ENST00000336023 ROMO1P60602 79 aa5.53□□□□□ -1.52
TUBA1B-202ENST00000336023 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
TUBA1B-202ENST00000336023 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
TUBA1B-202ENST00000336023 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
TUBA1B-202ENST00000336023 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
TUBA1B-202ENST00000336023 KMT2DO14686 5537 aa5.45□□□□□ -1.54
TUBA1B-202ENST00000336023 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
TUBA1B-202ENST00000336023 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
TUBA1B-202ENST00000336023 H3BS24 57 aa5.41□□□□□ -1.54
TUBA1B-202ENST00000336023 TNP1P09430 55 aa5.38□□□□□ -1.55
TUBA1B-202ENST00000336023 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
TUBA1B-202ENST00000336023 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
TUBA1B-202ENST00000336023 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
TUBA1B-202ENST00000336023 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
TUBA1B-202ENST00000336023 KRTAP6-3Q3LI67 103 aa5.28□□□□□ -1.56
TUBA1B-202ENST00000336023 KRTAP5-9P26371 169 aa5.22□□□□□ -1.57
TUBA1B-202ENST00000336023 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
TUBA1B-202ENST00000336023 SPRR2FQ96RM1 72 aa5.19□□□□□ -1.58
TUBA1B-202ENST00000336023 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
TUBA1B-202ENST00000336023 MDN1Q9NU22 5596 aa5.13□□□□□ -1.59
TUBA1B-202ENST00000336023 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
TUBA1B-202ENST00000336023 KRTAP19-7Q3SYF9 63 aa5.12□□□□□ -1.59
TUBA1B-202ENST00000336023 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
TUBA1B-202ENST00000336023 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
TUBA1B-202ENST00000336023 MT1EP04732 61 aa5.05□□□□□ -1.6
TUBA1B-202ENST00000336023 NEBP20929 6669 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms