RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 NISCHQ9Y2I1 1504 aa32.27■■■□□ 2.76
TUBA1B-202ENST00000336023 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
TUBA1B-202ENST00000336023 ABCC9O60706 1549 aa27.41■■□□□ 1.98
TUBA1B-202ENST00000336023 ZCCHC6Q5VYS8 1495 aaKnown RBP26.99■■□□□ 1.91
TUBA1B-202ENST00000336023 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
TUBA1B-202ENST00000336023 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
TUBA1B-202ENST00000336023 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
TUBA1B-202ENST00000336023 NACADO15069 1562 aa26.61■■□□□ 1.85
TUBA1B-202ENST00000336023 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
TUBA1B-202ENST00000336023 SCRIBQ14160 1630 aa26■■□□□ 1.75
TUBA1B-202ENST00000336023 SHROOM4Q9ULL8 1493 aa25.9■■□□□ 1.74
TUBA1B-202ENST00000336023 UNC13AQ9UPW8 1703 aa25.84■■□□□ 1.73
TUBA1B-202ENST00000336023 PABPN1Q86U42 306 aaKnown RBP eCLIP25.77■■□□□ 1.72
TUBA1B-202ENST00000336023 BICRAQ9NZM4 1560 aa25.71■■□□□ 1.71
TUBA1B-202ENST00000336023 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
TUBA1B-202ENST00000336023 EIF4G1Q04637 1599 aaKnown RBP24.99■■□□□ 1.59
TUBA1B-202ENST00000336023 BAZ1AQ9NRL2 1556 aaPredicted RBP24.96■■□□□ 1.59
TUBA1B-202ENST00000336023 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
TUBA1B-202ENST00000336023 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
TUBA1B-202ENST00000336023 RSF1Q96T23 1441 aaPredicted RBP24.82■■□□□ 1.56
TUBA1B-202ENST00000336023 CC2D2AQ9P2K1 1620 aa24.76■■□□□ 1.55
TUBA1B-202ENST00000336023 DNAJC5BQ9UF47 199 aa24.75■■□□□ 1.55
TUBA1B-202ENST00000336023 ATAD2BQ9ULI0 1458 aa24.69■■□□□ 1.54
TUBA1B-202ENST00000336023 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
TUBA1B-202ENST00000336023 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
TUBA1B-202ENST00000336023 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.54
TUBA1B-202ENST00000336023 WIZO95785 1651 aa24.62■■□□□ 1.53
TUBA1B-202ENST00000336023 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
TUBA1B-202ENST00000336023 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
TUBA1B-202ENST00000336023 HMGXB3Q12766 1538 aa24.48■■□□□ 1.51
TUBA1B-202ENST00000336023 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
TUBA1B-202ENST00000336023 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
TUBA1B-202ENST00000336023 CADPSQ9ULU8 1353 aa23.94■■□□□ 1.42
TUBA1B-202ENST00000336023 CFTRP13569 1480 aa23.87■■□□□ 1.41
TUBA1B-202ENST00000336023 NESP48681 1621 aa23.86■■□□□ 1.41
TUBA1B-202ENST00000336023 LAMC3Q9Y6N6 1575 aa23.81■■□□□ 1.4
TUBA1B-202ENST00000336023 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
TUBA1B-202ENST00000336023 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.37
TUBA1B-202ENST00000336023 PRDM2Q13029 1718 aa23.58■■□□□ 1.37
TUBA1B-202ENST00000336023 ERCC6Q03468 1493 aa23.58■■□□□ 1.36
TUBA1B-202ENST00000336023 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
TUBA1B-202ENST00000336023 KIF21AQ7Z4S6 1674 aa23.5■■□□□ 1.35
TUBA1B-202ENST00000336023 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
TUBA1B-202ENST00000336023 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
TUBA1B-202ENST00000336023 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
TUBA1B-202ENST00000336023 URB2Q14146 1524 aaKnown RBP23.36■■□□□ 1.33
TUBA1B-202ENST00000336023 CUX1P39880 1505 aa23.32■■□□□ 1.32
TUBA1B-202ENST00000336023 THOC2Q8NI27 1593 aaKnown RBP23.32■■□□□ 1.32
TUBA1B-202ENST00000336023 TOPBP1Q92547 1522 aa23.31■■□□□ 1.32
TUBA1B-202ENST00000336023 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
TUBA1B-202ENST00000336023 WDR62O43379 1518 aa23.29■■□□□ 1.32
TUBA1B-202ENST00000336023 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
TUBA1B-202ENST00000336023 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
TUBA1B-202ENST00000336023 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
TUBA1B-202ENST00000336023 TOP2BQ02880 1626 aa23.22■■□□□ 1.31
TUBA1B-202ENST00000336023 BIVM-ERCC5R4GMW8 1640 aa23.18■■□□□ 1.3
TUBA1B-202ENST00000336023 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
TUBA1B-202ENST00000336023 POLA1P09884 1462 aaPredicted RBP23.15■■□□□ 1.3
TUBA1B-202ENST00000336023 CUX2O14529 1486 aa23.11■■□□□ 1.29
TUBA1B-202ENST00000336023 SOGA1O94964 1423 aa23.1■■□□□ 1.29
TUBA1B-202ENST00000336023 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
TUBA1B-202ENST00000336023 IFT140Q96RY7 1462 aa23.03■■□□□ 1.28
TUBA1B-202ENST00000336023 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
TUBA1B-202ENST00000336023 ABCA10Q8WWZ4 1543 aa22.96■■□□□ 1.27
TUBA1B-202ENST00000336023 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
TUBA1B-202ENST00000336023 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
TUBA1B-202ENST00000336023 AQRO60306 1485 aaKnown RBP eCLIP22.87■■□□□ 1.251e-8■■■■■ 35
TUBA1B-202ENST00000336023 KIF27Q86VH2 1401 aa22.86■■□□□ 1.25
TUBA1B-202ENST00000336023 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
TUBA1B-202ENST00000336023 RUSC2Q8N2Y8 1516 aa22.82■■□□□ 1.24
TUBA1B-202ENST00000336023 GAPVD1Q14C86 1478 aa22.82■■□□□ 1.24
TUBA1B-202ENST00000336023 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
TUBA1B-202ENST00000336023 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
TUBA1B-202ENST00000336023 EIF4G3O43432 1585 aaKnown RBP22.78■■□□□ 1.24
TUBA1B-202ENST00000336023 EEA1Q15075 1411 aa22.74■■□□□ 1.23
TUBA1B-202ENST00000336023 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
TUBA1B-202ENST00000336023 IGF1RP08069 1367 aa22.73■■□□□ 1.23
TUBA1B-202ENST00000336023 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
TUBA1B-202ENST00000336023 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
TUBA1B-202ENST00000336023 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
TUBA1B-202ENST00000336023 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
TUBA1B-202ENST00000336023 MAGI1Q96QZ7 1491 aaPredicted RBP22.61■■□□□ 1.21
TUBA1B-202ENST00000336023 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
TUBA1B-202ENST00000336023 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
TUBA1B-202ENST00000336023 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
TUBA1B-202ENST00000336023 FBLN2P98095 1184 aa22.53■■□□□ 1.2
TUBA1B-202ENST00000336023 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
TUBA1B-202ENST00000336023 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
TUBA1B-202ENST00000336023 CUL7Q14999 1698 aa22.53■■□□□ 1.2
TUBA1B-202ENST00000336023 SYNJ2O15056 1496 aa22.52■■□□□ 1.2
TUBA1B-202ENST00000336023 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
TUBA1B-202ENST00000336023 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
TUBA1B-202ENST00000336023 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
TUBA1B-202ENST00000336023 KIF21BO75037 1637 aa22.41■■□□□ 1.18
TUBA1B-202ENST00000336023 GOLGA3Q08378 1498 aa22.38■■□□□ 1.17
TUBA1B-202ENST00000336023 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
TUBA1B-202ENST00000336023 CHD1O14646 1710 aa22.36■■□□□ 1.17
TUBA1B-202ENST00000336023 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
TUBA1B-202ENST00000336023 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
TUBA1B-202ENST00000336023 NUP160Q12769 1436 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms