RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RYR3Q15413 4870 aa6.49□□□□□ -1.37
VPS33B-201ENST00000333371 KRTAP10-8P60410 259 aa6.46□□□□□ -1.37
VPS33B-201ENST00000333371 H1FX-AS1Q4G0G2 97 aa6.46□□□□□ -1.37
VPS33B-201ENST00000333371 COX6B2Q6YFQ2 88 aa6.44□□□□□ -1.38
VPS33B-201ENST00000333371 RYR1P21817 5038 aa6.42□□□□□ -1.38
VPS33B-201ENST00000333371 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
VPS33B-201ENST00000333371 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
VPS33B-201ENST00000333371 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
VPS33B-201ENST00000333371 LPAP08519 4548 aa6.35□□□□□ -1.39
VPS33B-201ENST00000333371 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
VPS33B-201ENST00000333371 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
VPS33B-201ENST00000333371 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
VPS33B-201ENST00000333371 MT1HL1P0DM35 61 aa6.3□□□□□ -1.4
VPS33B-201ENST00000333371 XP32Q5T750 250 aa6.29□□□□□ -1.4
VPS33B-201ENST00000333371 A0A0D9SG42 100 aa6.29□□□□□ -1.4
VPS33B-201ENST00000333371 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
VPS33B-201ENST00000333371 KRTAP25-1Q3LHN0 102 aa6.29□□□□□ -1.4
VPS33B-201ENST00000333371 EPPK1P58107 5090 aaKnown RBP6.26□□□□□ -1.41
VPS33B-201ENST00000333371 ROMO1P60602 79 aa6.26□□□□□ -1.41
VPS33B-201ENST00000333371 LRP2P98164 4655 aa6.26□□□□□ -1.41
VPS33B-201ENST00000333371 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
VPS33B-201ENST00000333371 K7ERS5 55 aa6.23□□□□□ -1.41
VPS33B-201ENST00000333371 S4R3F8 94 aa6.23□□□□□ -1.41
VPS33B-201ENST00000333371 P0C880 135 aa6.23□□□□□ -1.41
VPS33B-201ENST00000333371 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
VPS33B-201ENST00000333371 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
VPS33B-201ENST00000333371 ABCA13Q86UQ4 5058 aa6.11□□□□□ -1.43
VPS33B-201ENST00000333371 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
VPS33B-201ENST00000333371 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
VPS33B-201ENST00000333371 J3QL48 77 aa6.07□□□□□ -1.44
VPS33B-201ENST00000333371 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
VPS33B-201ENST00000333371 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
VPS33B-201ENST00000333371 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
VPS33B-201ENST00000333371 HERC2O95714 4834 aa5.93□□□□□ -1.46
VPS33B-201ENST00000333371 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
VPS33B-201ENST00000333371 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
VPS33B-201ENST00000333371 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
VPS33B-201ENST00000333371 M0QZ58 72 aa5.87□□□□□ -1.47
VPS33B-201ENST00000333371 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
VPS33B-201ENST00000333371 LORP23490 312 aaPredicted RBP5.84□□□□□ -1.48
VPS33B-201ENST00000333371 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
VPS33B-201ENST00000333371 R4GN34 69 aa5.81□□□□□ -1.48
VPS33B-201ENST00000333371 MUC2Q02817 5179 aa5.79□□□□□ -1.48
VPS33B-201ENST00000333371 KRTAP15-1Q3LI76 137 aa5.77□□□□□ -1.49
VPS33B-201ENST00000333371 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
VPS33B-201ENST00000333371 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
VPS33B-201ENST00000333371 HERC1Q15751 4861 aa5.62□□□□□ -1.51
VPS33B-201ENST00000333371 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
VPS33B-201ENST00000333371 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
VPS33B-201ENST00000333371 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
VPS33B-201ENST00000333371 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
VPS33B-201ENST00000333371 FAT4Q6V0I7 4981 aa5.52□□□□□ -1.53
VPS33B-201ENST00000333371 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
VPS33B-201ENST00000333371 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
VPS33B-201ENST00000333371 M0R2T5 61 aa5.38□□□□□ -1.55
VPS33B-201ENST00000333371 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
VPS33B-201ENST00000333371 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
VPS33B-201ENST00000333371 UBR4Q5T4S7 5183 aa5.32□□□□□ -1.56
VPS33B-201ENST00000333371 MT1HP80294 61 aa5.29□□□□□ -1.56
VPS33B-201ENST00000333371 TNP1P09430 55 aa5.28□□□□□ -1.56
VPS33B-201ENST00000333371 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
VPS33B-201ENST00000333371 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
VPS33B-201ENST00000333371 SPRR2GQ9BYE4 73 aa5.17□□□□□ -1.58
VPS33B-201ENST00000333371 MT2AP02795 61 aa5.16□□□□□ -1.58
VPS33B-201ENST00000333371 MT1FP04733 61 aa5.15□□□□□ -1.59
VPS33B-201ENST00000333371 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
VPS33B-201ENST00000333371 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
VPS33B-201ENST00000333371 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
VPS33B-201ENST00000333371 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
VPS33B-201ENST00000333371 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
VPS33B-201ENST00000333371 MT1BP07438 61 aa4.93□□□□□ -1.62
VPS33B-201ENST00000333371 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
VPS33B-201ENST00000333371 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
VPS33B-201ENST00000333371 MT1XP80297 61 aa4.91□□□□□ -1.62
VPS33B-201ENST00000333371 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
VPS33B-201ENST00000333371 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
VPS33B-201ENST00000333371 KRTAP10-7P60409 375 aaPredicted RBP4.83□□□□□ -1.64
VPS33B-201ENST00000333371 LCE2AQ5TA79 106 aaPredicted RBP4.82□□□□□ -1.64
VPS33B-201ENST00000333371 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
VPS33B-201ENST00000333371 USH2AO75445 5202 aa4.81□□□□□ -1.64
VPS33B-201ENST00000333371 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
VPS33B-201ENST00000333371 KMT2DO14686 5537 aa4.77□□□□□ -1.65
VPS33B-201ENST00000333371 LCE2BO14633 110 aa4.75□□□□□ -1.65
VPS33B-201ENST00000333371 INE1O15225 51 aa4.66□□□□□ -1.66
VPS33B-201ENST00000333371 KRTAP19-5Q3LI72 72 aa4.61□□□□□ -1.67
VPS33B-201ENST00000333371 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
VPS33B-201ENST00000333371 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
VPS33B-201ENST00000333371 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
VPS33B-201ENST00000333371 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
VPS33B-201ENST00000333371 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
VPS33B-201ENST00000333371 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
VPS33B-201ENST00000333371 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
VPS33B-201ENST00000333371 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
VPS33B-201ENST00000333371 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
VPS33B-201ENST00000333371 LCE2DQ5TA82 110 aaPredicted RBP4.25□□□□□ -1.73
VPS33B-201ENST00000333371 MT1LQ93083 61 aa4.24□□□□□ -1.73
VPS33B-201ENST00000333371 MT1EP04732 61 aa4.23□□□□□ -1.73
VPS33B-201ENST00000333371 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
VPS33B-201ENST00000333371 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
VPS33B-201ENST00000333371 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms