RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SPTSSBQ8NFR3 76 aa12.3□□□□□ -0.44
TSEN54-201ENST00000333213 A6NN06 94 aa12.27□□□□□ -0.44
TSEN54-201ENST00000333213 SPINK7P58062 85 aa12.27□□□□□ -0.44
TSEN54-201ENST00000333213 KTN1-AS1Q86SY8 53 aa12.27□□□□□ -0.44
TSEN54-201ENST00000333213 IGKV2D-30A0A075B6S6 120 aa12.23□□□□□ -0.45
TSEN54-201ENST00000333213 SEC61GP60059 68 aa12.23□□□□□ -0.45
TSEN54-201ENST00000333213 MUC17Q685J3 4493 aa12.15□□□□□ -0.46
TSEN54-201ENST00000333213 C7orf65Q6ZTY9 151 aa12.15□□□□□ -0.46
TSEN54-201ENST00000333213 A0A1B0GU69 56 aa12.11□□□□□ -0.47
TSEN54-201ENST00000333213 SEC61BP60468 96 aaKnown RBP12.08□□□□□ -0.48
TSEN54-201ENST00000333213 MUC2Q02817 5179 aa12.02□□□□□ -0.48
TSEN54-201ENST00000333213 SPATA8Q6RVD6 105 aa12.02□□□□□ -0.49
TSEN54-201ENST00000333213 KRTAP4-1Q9BYQ7 146 aa12.01□□□□□ -0.49
TSEN54-201ENST00000333213 UBR4Q5T4S7 5183 aa11.97□□□□□ -0.49
TSEN54-201ENST00000333213 UQCR11O14957 56 aa11.96□□□□□ -0.5
TSEN54-201ENST00000333213 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
TSEN54-201ENST00000333213 MIR22HGQ0VDD5 57 aa11.89□□□□□ -0.51
TSEN54-201ENST00000333213 KRTAP3-1Q9BYR8 98 aa11.86□□□□□ -0.51
TSEN54-201ENST00000333213 RNF213Q63HN8 5207 aa11.79□□□□□ -0.52
TSEN54-201ENST00000333213 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
TSEN54-201ENST00000333213 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
TSEN54-201ENST00000333213 H1FX-AS1Q4G0G2 97 aa11.54□□□□□ -0.56
TSEN54-201ENST00000333213 PRAC1Q96KF2 57 aa11.52□□□□□ -0.56
TSEN54-201ENST00000333213 FAT4Q6V0I7 4981 aa11.52□□□□□ -0.56
TSEN54-201ENST00000333213 ADM2Q7Z4H4 148 aa11.48□□□□□ -0.57
TSEN54-201ENST00000333213 H0YAA0 97 aa11.45□□□□□ -0.58
TSEN54-201ENST00000333213 LCE2CQ5TA81 110 aa11.45□□□□□ -0.58
TSEN54-201ENST00000333213 KRTAP3-3Q9BYR6 98 aa11.45□□□□□ -0.58
TSEN54-201ENST00000333213 A0A1B0GU33 70 aa11.44□□□□□ -0.58
TSEN54-201ENST00000333213 S4R3F8 94 aa11.42□□□□□ -0.58
TSEN54-201ENST00000333213 FLGP20930 4061 aaPredicted RBP11.42□□□□□ -0.58
TSEN54-201ENST00000333213 LINC01554Q52M75 96 aa11.35□□□□□ -0.59
TSEN54-201ENST00000333213 CSAG1Q6PB30 78 aa11.26□□□□□ -0.61
TSEN54-201ENST00000333213 MT1HP80294 61 aa11.19□□□□□ -0.62
TSEN54-201ENST00000333213 K7ERS5 55 aa11.17□□□□□ -0.62
TSEN54-201ENST00000333213 KRTAP25-1Q3LHN0 102 aa11.06□□□□□ -0.64
TSEN54-201ENST00000333213 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
TSEN54-201ENST00000333213 M0R2T5 61 aa10.98□□□□□ -0.65
TSEN54-201ENST00000333213 KRTAP3-2Q9BYR7 98 aa10.98□□□□□ -0.65
TSEN54-201ENST00000333213 P0C880 135 aa10.9□□□□□ -0.67
TSEN54-201ENST00000333213 ROMO1P60602 79 aa10.89□□□□□ -0.67
TSEN54-201ENST00000333213 LCE2AQ5TA79 106 aaPredicted RBP10.89□□□□□ -0.67
TSEN54-201ENST00000333213 KRTAP13-4Q3LI77 160 aa10.86□□□□□ -0.67
TSEN54-201ENST00000333213 KRTAP9-8Q9BYQ0 159 aa10.78□□□□□ -0.68
TSEN54-201ENST00000333213 LORP23490 312 aaPredicted RBP10.75□□□□□ -0.69
TSEN54-201ENST00000333213 A0A0D9SG42 100 aa10.7□□□□□ -0.7
TSEN54-201ENST00000333213 MT2AP02795 61 aa10.7□□□□□ -0.7
TSEN54-201ENST00000333213 MT1FP04733 61 aa10.66□□□□□ -0.7
TSEN54-201ENST00000333213 M0QZ58 72 aa10.6□□□□□ -0.71
TSEN54-201ENST00000333213 CRIPTQ9P021 101 aa10.58□□□□□ -0.72
TSEN54-201ENST00000333213 KRTAP10-10P60014 251 aa10.56□□□□□ -0.72
TSEN54-201ENST00000333213 KRTAP12-2P59991 146 aa10.53□□□□□ -0.72
TSEN54-201ENST00000333213 KRTAP12-1P59990 96 aa10.52□□□□□ -0.73
TSEN54-201ENST00000333213 R4GN34 69 aa10.51□□□□□ -0.73
TSEN54-201ENST00000333213 KRTAP19-1Q8IUB9 90 aa10.42□□□□□ -0.74
TSEN54-201ENST00000333213 SPINT4Q6UDR6 99 aa10.39□□□□□ -0.75
TSEN54-201ENST00000333213 SPRR2GQ9BYE4 73 aa10.39□□□□□ -0.75
TSEN54-201ENST00000333213 KRTAP9-3Q9BYQ3 159 aa10.39□□□□□ -0.75
TSEN54-201ENST00000333213 C10orf95Q9H7T3 257 aa10.29□□□□□ -0.76
TSEN54-201ENST00000333213 H3BS24 57 aa10.27□□□□□ -0.77
TSEN54-201ENST00000333213 LCE2BO14633 110 aa10.15□□□□□ -0.79
TSEN54-201ENST00000333213 KRTAP19-8Q3LI54 63 aa10.13□□□□□ -0.79
TSEN54-201ENST00000333213 KRTAP15-1Q3LI76 137 aa10.09□□□□□ -0.79
TSEN54-201ENST00000333213 MT1BP07438 61 aa10.06□□□□□ -0.8
TSEN54-201ENST00000333213 USH2AO75445 5202 aa10.02□□□□□ -0.81
TSEN54-201ENST00000333213 PLAC4Q8WY50 150 aa9.92□□□□□ -0.82
TSEN54-201ENST00000333213 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
TSEN54-201ENST00000333213 FSIP2Q5CZC0 6907 aa9.86□□□□□ -0.83
TSEN54-201ENST00000333213 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
TSEN54-201ENST00000333213 PP632Q6XCG6 107 aa9.75□□□□□ -0.85
TSEN54-201ENST00000333213 SSPOA2VEC9 5147 aa9.73□□□□□ -0.85
TSEN54-201ENST00000333213 NDUFAF8A1L188 74 aa9.72□□□□□ -0.85
TSEN54-201ENST00000333213 MT1XP80297 61 aa9.69□□□□□ -0.86
TSEN54-201ENST00000333213 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
TSEN54-201ENST00000333213 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
TSEN54-201ENST00000333213 KRTAP23-1A1A580 65 aa9.51□□□□□ -0.89
TSEN54-201ENST00000333213 KRTAP19-6Q3LI70 58 aa9.5□□□□□ -0.89
TSEN54-201ENST00000333213 PRO2289Q9P1D8 64 aa9.46□□□□□ -0.89
TSEN54-201ENST00000333213 TNP1P09430 55 aa9.41□□□□□ -0.9
TSEN54-201ENST00000333213 FCGBPQ9Y6R7 5405 aaPredicted RBP9.33□□□□□ -0.92
TSEN54-201ENST00000333213 KRTAP10-7P60409 375 aaPredicted RBP9.31□□□□□ -0.92
TSEN54-201ENST00000333213 CRCT1Q9UGL9 99 aa9.24□□□□□ -0.93
TSEN54-201ENST00000333213 LUZP6Q538Z0 58 aa9.22□□□□□ -0.93
TSEN54-201ENST00000333213 KMT2DO14686 5537 aa9.19□□□□□ -0.94
TSEN54-201ENST00000333213 KRTAP10-12P60413 245 aa9.16□□□□□ -0.94
TSEN54-201ENST00000333213 SPRR5A0A1B0GTR4 108 aa9.08□□□□□ -0.96
TSEN54-201ENST00000333213 KRTAP4-8A0A0G2JLE6 195 aa9.03□□□□□ -0.96
TSEN54-201ENST00000333213 LCE3AQ5TA76 89 aa9.03□□□□□ -0.96
TSEN54-201ENST00000333213 KRTAP4-8Q9BYQ9 185 aa9.03□□□□□ -0.96
TSEN54-201ENST00000333213 MACF1Q9UPN3 7388 aaKnown RBP8.98□□□□□ -0.97
TSEN54-201ENST00000333213 KRTAP9-6A0A140TA67 174 aa8.9□□□□□ -0.98
TSEN54-201ENST00000333213 A0A0A0MQY5 61 aa8.82□□□□□ -1
TSEN54-201ENST00000333213 KRTAP8-1Q8IUC2 63 aa8.81□□□□□ -1
TSEN54-201ENST00000333213 SYNE2Q8WXH0 6885 aaKnown RBP8.76□□□□□ -1.01
TSEN54-201ENST00000333213 KRTAP19-5Q3LI72 72 aa8.7□□□□□ -1.02
TSEN54-201ENST00000333213 KRTAP19-7Q3SYF9 63 aa8.66□□□□□ -1.02
TSEN54-201ENST00000333213 KRTAP12-3P60328 96 aa8.64□□□□□ -1.03
TSEN54-201ENST00000333213 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.58□□□□□ -1.04
TSEN54-201ENST00000333213 MUC12Q9UKN1 5478 aa8.51□□□□□ -1.05
TSEN54-201ENST00000333213 MT1EP04732 61 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms