RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 KRTAP9-3Q9BYQ3 159 aa7.72□□□□□ -1.17
C11orf88-201ENST00000332814 H3BPC8 53 aa7.71□□□□□ -1.18
C11orf88-201ENST00000332814 FAM236AA0A1B0GUQ0 79 aa7.68□□□□□ -1.18
C11orf88-201ENST00000332814 FAM236BA0A1B0GV22 79 aa7.68□□□□□ -1.18
C11orf88-201ENST00000332814 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
C11orf88-201ENST00000332814 A8MUN3 132 aa7.67□□□□□ -1.18
C11orf88-201ENST00000332814 KLKP1Q107X0 134 aa7.67□□□□□ -1.18
C11orf88-201ENST00000332814 SMIM20Q8N5G0 67 aa7.65□□□□□ -1.18
C11orf88-201ENST00000332814 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
C11orf88-201ENST00000332814 NDUFC1O43677 76 aa7.61□□□□□ -1.19
C11orf88-201ENST00000332814 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
C11orf88-201ENST00000332814 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
C11orf88-201ENST00000332814 LCE3BQ5TA77 95 aa7.54□□□□□ -1.2
C11orf88-201ENST00000332814 USH2AO75445 5202 aa7.53□□□□□ -1.2
C11orf88-201ENST00000332814 DMAC1Q96GE9 116 aa7.49□□□□□ -1.21
C11orf88-201ENST00000332814 SSPOA2VEC9 5147 aa7.44□□□□□ -1.22
C11orf88-201ENST00000332814 H0YAA0 97 aa7.42□□□□□ -1.22
C11orf88-201ENST00000332814 SERP2Q8N6R1 65 aa7.42□□□□□ -1.22
C11orf88-201ENST00000332814 SNURFQ9Y675 71 aa7.42□□□□□ -1.22
C11orf88-201ENST00000332814 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
C11orf88-201ENST00000332814 ACYP2P14621 99 aa7.39□□□□□ -1.23
C11orf88-201ENST00000332814 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
C11orf88-201ENST00000332814 C20orf197Q8N268 126 aa7.38□□□□□ -1.23
C11orf88-201ENST00000332814 SPRR2GQ9BYE4 73 aa7.38□□□□□ -1.23
C11orf88-201ENST00000332814 KRTAP19-6Q3LI70 58 aa7.35□□□□□ -1.23
C11orf88-201ENST00000332814 Q5VV11 94 aa7.35□□□□□ -1.23
C11orf88-201ENST00000332814 KRTAP9-9Q9BYP9 154 aa7.33□□□□□ -1.24
C11orf88-201ENST00000332814 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
C11orf88-201ENST00000332814 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
C11orf88-201ENST00000332814 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
C11orf88-201ENST00000332814 KRTAP19-4Q3LI73 84 aa7.3□□□□□ -1.24
C11orf88-201ENST00000332814 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
C11orf88-201ENST00000332814 SPANXA2-OT1Q8N9U9 137 aa7.28□□□□□ -1.24
C11orf88-201ENST00000332814 MT1BP07438 61 aa7.25□□□□□ -1.25
C11orf88-201ENST00000332814 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
C11orf88-201ENST00000332814 COX7CP15954 63 aa7.24□□□□□ -1.25
C11orf88-201ENST00000332814 R4GN34 69 aa7.21□□□□□ -1.26
C11orf88-201ENST00000332814 P0C880 135 aa7.19□□□□□ -1.26
C11orf88-201ENST00000332814 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
C11orf88-201ENST00000332814 A6NN06 94 aa7.17□□□□□ -1.26
C11orf88-201ENST00000332814 M0QZ58 72 aa7.16□□□□□ -1.26
C11orf88-201ENST00000332814 ANAPC13Q9BS18 74 aa7.13□□□□□ -1.27
C11orf88-201ENST00000332814 KRTAP9-7A8MTY7 169 aa7.12□□□□□ -1.27
C11orf88-201ENST00000332814 LCE4AQ5TA78 99 aa7.09□□□□□ -1.27
C11orf88-201ENST00000332814 COA5Q86WW8 74 aa7.08□□□□□ -1.28
C11orf88-201ENST00000332814 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
C11orf88-201ENST00000332814 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
C11orf88-201ENST00000332814 H7BZZ5 65 aa7.05□□□□□ -1.28
C11orf88-201ENST00000332814 LINC01554Q52M75 96 aa7.05□□□□□ -1.28
C11orf88-201ENST00000332814 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
C11orf88-201ENST00000332814 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
C11orf88-201ENST00000332814 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
C11orf88-201ENST00000332814 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
C11orf88-201ENST00000332814 SEC61GP60059 68 aa6.96□□□□□ -1.3
C11orf88-201ENST00000332814 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
C11orf88-201ENST00000332814 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
C11orf88-201ENST00000332814 SERP1Q9Y6X1 66 aa6.92□□□□□ -1.3
C11orf88-201ENST00000332814 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
C11orf88-201ENST00000332814 KRTAP6-3Q3LI67 103 aa6.86□□□□□ -1.31
C11orf88-201ENST00000332814 ATP5EP56381 51 aaPredicted RBP6.85□□□□□ -1.31
C11orf88-201ENST00000332814 MT1XP80297 61 aa6.85□□□□□ -1.31
C11orf88-201ENST00000332814 KRTAP4-9Q9BYQ8 210 aa6.81□□□□□ -1.32
C11orf88-201ENST00000332814 KRTAP13-4Q3LI77 160 aa6.77□□□□□ -1.33
C11orf88-201ENST00000332814 A0A1B0GU33 70 aa6.75□□□□□ -1.33
C11orf88-201ENST00000332814 A0A1B0GU69 56 aa6.75□□□□□ -1.33
C11orf88-201ENST00000332814 TMEM258P61165 79 aa6.73□□□□□ -1.33
C11orf88-201ENST00000332814 A0A0D9SG42 100 aa6.69□□□□□ -1.34
C11orf88-201ENST00000332814 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
C11orf88-201ENST00000332814 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
C11orf88-201ENST00000332814 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
C11orf88-201ENST00000332814 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
C11orf88-201ENST00000332814 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
C11orf88-201ENST00000332814 KRTAP5-9P26371 169 aa6.61□□□□□ -1.35
C11orf88-201ENST00000332814 KRTAP4-11Q9BYQ6 195 aa6.61□□□□□ -1.35
C11orf88-201ENST00000332814 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
C11orf88-201ENST00000332814 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
C11orf88-201ENST00000332814 SMIM26A0A096LP01 95 aa6.59□□□□□ -1.35
C11orf88-201ENST00000332814 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
C11orf88-201ENST00000332814 KRTAP10-7P60409 375 aaPredicted RBP6.55□□□□□ -1.36
C11orf88-201ENST00000332814 LINC01558Q9Y6Z2 57 aa6.55□□□□□ -1.36
C11orf88-201ENST00000332814 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
C11orf88-201ENST00000332814 NEBP20929 6669 aa6.52□□□□□ -1.37
C11orf88-201ENST00000332814 KRTAP10-12P60413 245 aa6.51□□□□□ -1.37
C11orf88-201ENST00000332814 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
C11orf88-201ENST00000332814 KMT2DO14686 5537 aa6.47□□□□□ -1.37
C11orf88-201ENST00000332814 A8MU10 97 aa6.47□□□□□ -1.37
C11orf88-201ENST00000332814 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
C11orf88-201ENST00000332814 UQCR11O14957 56 aa6.39□□□□□ -1.39
C11orf88-201ENST00000332814 SPRR2EP22531 72 aa6.39□□□□□ -1.39
C11orf88-201ENST00000332814 SPRR2BP35325 72 aa6.39□□□□□ -1.39
C11orf88-201ENST00000332814 SPRR2AP35326 72 aa6.39□□□□□ -1.39
C11orf88-201ENST00000332814 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
C11orf88-201ENST00000332814 V9GYY9 64 aa6.36□□□□□ -1.39
C11orf88-201ENST00000332814 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
C11orf88-201ENST00000332814 KRTAP20-1Q3LI63 56 aa6.29□□□□□ -1.4
C11orf88-201ENST00000332814 PCP4P48539 62 aa6.27□□□□□ -1.41
C11orf88-201ENST00000332814 MIR22HGQ0VDD5 57 aa6.27□□□□□ -1.41
C11orf88-201ENST00000332814 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
C11orf88-201ENST00000332814 PSPHP1O15172 72 aa6.25□□□□□ -1.41
C11orf88-201ENST00000332814 Q1T7F1 81 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 1083.2 ms