RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KRTAP3-1Q9BYR8 98 aa9.21□□□□□ -0.94
DDX28-201ENST00000332395 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
DDX28-201ENST00000332395 MT1HL1P0DM35 61 aa9.19□□□□□ -0.94
DDX28-201ENST00000332395 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.94
DDX28-201ENST00000332395 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
DDX28-201ENST00000332395 XP32Q5T750 250 aa9.14□□□□□ -0.95
DDX28-201ENST00000332395 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
DDX28-201ENST00000332395 COX6B2Q6YFQ2 88 aa9.12□□□□□ -0.95
DDX28-201ENST00000332395 H0YAA0 97 aa8.99□□□□□ -0.97
DDX28-201ENST00000332395 KRTAP4-5Q9BYR2 181 aa8.94□□□□□ -0.98
DDX28-201ENST00000332395 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
DDX28-201ENST00000332395 A0A1B0GU33 70 aa8.89□□□□□ -0.99
DDX28-201ENST00000332395 KRTAP25-1Q3LHN0 102 aa8.87□□□□□ -0.99
DDX28-201ENST00000332395 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
DDX28-201ENST00000332395 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
DDX28-201ENST00000332395 LRP2P98164 4655 aa8.84□□□□□ -0.99
DDX28-201ENST00000332395 LPAP08519 4548 aa8.83□□□□□ -1
DDX28-201ENST00000332395 ABCA13Q86UQ4 5058 aa8.81□□□□□ -1
DDX28-201ENST00000332395 S4R3F8 94 aa8.8□□□□□ -1
DDX28-201ENST00000332395 ROMO1P60602 79 aa8.69□□□□□ -1.02
DDX28-201ENST00000332395 K7ERS5 55 aa8.68□□□□□ -1.02
DDX28-201ENST00000332395 KRTAP10-6P60371 365 aaPredicted RBP8.68□□□□□ -1.02
DDX28-201ENST00000332395 J3QL48 77 aa8.66□□□□□ -1.02
DDX28-201ENST00000332395 KRTAP3-2Q9BYR7 98 aa8.64□□□□□ -1.03
DDX28-201ENST00000332395 HERC2O95714 4834 aa8.62□□□□□ -1.03
DDX28-201ENST00000332395 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
DDX28-201ENST00000332395 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
DDX28-201ENST00000332395 P0C880 135 aa8.55□□□□□ -1.04
DDX28-201ENST00000332395 KRTAP13-4Q3LI77 160 aa8.54□□□□□ -1.04
DDX28-201ENST00000332395 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.05
DDX28-201ENST00000332395 MUC17Q685J3 4493 aa8.51□□□□□ -1.05
DDX28-201ENST00000332395 KRTAP4-1Q9BYQ7 146 aa8.45□□□□□ -1.06
DDX28-201ENST00000332395 A0A0D9SG42 100 aa8.44□□□□□ -1.06
DDX28-201ENST00000332395 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
DDX28-201ENST00000332395 M0QZ58 72 aa8.29□□□□□ -1.08
DDX28-201ENST00000332395 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
DDX28-201ENST00000332395 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
DDX28-201ENST00000332395 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
DDX28-201ENST00000332395 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
DDX28-201ENST00000332395 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
DDX28-201ENST00000332395 PCLOQ9Y6V0 5065 aa8.2□□□□□ -1.1
DDX28-201ENST00000332395 HERC1Q15751 4861 aa8.2□□□□□ -1.1
DDX28-201ENST00000332395 MUC2Q02817 5179 aa8.18□□□□□ -1.1
DDX28-201ENST00000332395 KRTAP15-1Q3LI76 137 aa8.17□□□□□ -1.1
DDX28-201ENST00000332395 R4GN34 69 aa8.15□□□□□ -1.1
DDX28-201ENST00000332395 HMCN2Q8NDA2 5059 aa8.15□□□□□ -1.1
DDX28-201ENST00000332395 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
DDX28-201ENST00000332395 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
DDX28-201ENST00000332395 NDUFAF8A1L188 74 aa8.04□□□□□ -1.12
DDX28-201ENST00000332395 LCE2CQ5TA81 110 aa7.89□□□□□ -1.15
DDX28-201ENST00000332395 FAT4Q6V0I7 4981 aa7.81□□□□□ -1.16
DDX28-201ENST00000332395 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
DDX28-201ENST00000332395 UBR4Q5T4S7 5183 aa7.76□□□□□ -1.17
DDX28-201ENST00000332395 MT1HP80294 61 aa7.7□□□□□ -1.18
DDX28-201ENST00000332395 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
DDX28-201ENST00000332395 M0R2T5 61 aa7.69□□□□□ -1.18
DDX28-201ENST00000332395 LUZP6Q538Z0 58 aa7.66□□□□□ -1.18
DDX28-201ENST00000332395 PLAC4Q8WY50 150 aa7.64□□□□□ -1.19
DDX28-201ENST00000332395 SPRR2GQ9BYE4 73 aa7.59□□□□□ -1.2
DDX28-201ENST00000332395 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
DDX28-201ENST00000332395 MT2AP02795 61 aa7.51□□□□□ -1.21
DDX28-201ENST00000332395 MT1FP04733 61 aa7.5□□□□□ -1.21
DDX28-201ENST00000332395 KRTAP9-8Q9BYQ0 159 aa7.49□□□□□ -1.21
DDX28-201ENST00000332395 KRTAP10-10P60014 251 aa7.48□□□□□ -1.21
DDX28-201ENST00000332395 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
DDX28-201ENST00000332395 TNP1P09430 55 aa7.39□□□□□ -1.23
DDX28-201ENST00000332395 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
DDX28-201ENST00000332395 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
DDX28-201ENST00000332395 MT1BP07438 61 aa7.2□□□□□ -1.26
DDX28-201ENST00000332395 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
DDX28-201ENST00000332395 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
DDX28-201ENST00000332395 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
DDX28-201ENST00000332395 MT1XP80297 61 aa7.08□□□□□ -1.28
DDX28-201ENST00000332395 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
DDX28-201ENST00000332395 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
DDX28-201ENST00000332395 LCE2BO14633 110 aa6.93□□□□□ -1.3
DDX28-201ENST00000332395 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
DDX28-201ENST00000332395 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
DDX28-201ENST00000332395 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
DDX28-201ENST00000332395 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
DDX28-201ENST00000332395 USH2AO75445 5202 aa6.75□□□□□ -1.33
DDX28-201ENST00000332395 KRTAP12-3P60328 96 aa6.71□□□□□ -1.33
DDX28-201ENST00000332395 INE1O15225 51 aa6.52□□□□□ -1.36
DDX28-201ENST00000332395 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
DDX28-201ENST00000332395 KMT2DO14686 5537 aa6.5□□□□□ -1.37
DDX28-201ENST00000332395 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
DDX28-201ENST00000332395 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
DDX28-201ENST00000332395 SSPOA2VEC9 5147 aa6.42□□□□□ -1.38
DDX28-201ENST00000332395 KRTAP19-6Q3LI70 58 aa6.33□□□□□ -1.4
DDX28-201ENST00000332395 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
DDX28-201ENST00000332395 LCE3CQ5T5A8 94 aa6.3□□□□□ -1.4
DDX28-201ENST00000332395 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
DDX28-201ENST00000332395 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
DDX28-201ENST00000332395 LCE2DQ5TA82 110 aaPredicted RBP6.21□□□□□ -1.41
DDX28-201ENST00000332395 MT1EP04732 61 aa6.16□□□□□ -1.42
DDX28-201ENST00000332395 MT1LQ93083 61 aa6.11□□□□□ -1.43
DDX28-201ENST00000332395 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
DDX28-201ENST00000332395 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
DDX28-201ENST00000332395 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
DDX28-201ENST00000332395 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms