RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
ATP2C1-201ENST00000328560 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
ATP2C1-201ENST00000328560 XP32Q5T750 250 aa7.25□□□□□ -1.25
ATP2C1-201ENST00000328560 ROMO1P60602 79 aa7.24□□□□□ -1.25
ATP2C1-201ENST00000328560 FAT3Q8TDW7 4589 aa7.23□□□□□ -1.25
ATP2C1-201ENST00000328560 A0A0D9SG42 100 aa7.22□□□□□ -1.25
ATP2C1-201ENST00000328560 K7ERS5 55 aa7.22□□□□□ -1.25
ATP2C1-201ENST00000328560 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
ATP2C1-201ENST00000328560 HSPG2P98160 4391 aa7.2□□□□□ -1.26
ATP2C1-201ENST00000328560 KRTAP17-1Q9BYP8 105 aa7.19□□□□□ -1.26
ATP2C1-201ENST00000328560 S4R3F8 94 aa7.18□□□□□ -1.26
ATP2C1-201ENST00000328560 TNXBP22105 4242 aa7.18□□□□□ -1.26
ATP2C1-201ENST00000328560 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
ATP2C1-201ENST00000328560 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
ATP2C1-201ENST00000328560 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
ATP2C1-201ENST00000328560 MT1HL1P0DM35 61 aa7.11□□□□□ -1.27
ATP2C1-201ENST00000328560 KRTAP13-4Q3LI77 160 aa7.11□□□□□ -1.27
ATP2C1-201ENST00000328560 P0C880 135 aa7.1□□□□□ -1.27
ATP2C1-201ENST00000328560 KRTAP25-1Q3LHN0 102 aa7.08□□□□□ -1.28
ATP2C1-201ENST00000328560 RYR3Q15413 4870 aa7.07□□□□□ -1.28
ATP2C1-201ENST00000328560 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
ATP2C1-201ENST00000328560 RYR1P21817 5038 aa7.07□□□□□ -1.28
ATP2C1-201ENST00000328560 TPRXLQ17RH7 258 aa7.03□□□□□ -1.28
ATP2C1-201ENST00000328560 J3QL48 77 aa7.02□□□□□ -1.29
ATP2C1-201ENST00000328560 LRP2P98164 4655 aa6.98□□□□□ -1.29
ATP2C1-201ENST00000328560 LPAP08519 4548 aa6.97□□□□□ -1.29
ATP2C1-201ENST00000328560 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
ATP2C1-201ENST00000328560 SPINT4Q6UDR6 99 aa6.96□□□□□ -1.3
ATP2C1-201ENST00000328560 SEC61BP60468 96 aaKnown RBP6.91□□□□□ -1.3
ATP2C1-201ENST00000328560 KRTAP4-5Q9BYR2 181 aa6.91□□□□□ -1.3
ATP2C1-201ENST00000328560 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
ATP2C1-201ENST00000328560 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
ATP2C1-201ENST00000328560 EPPK1P58107 5090 aaKnown RBP6.85□□□□□ -1.31
ATP2C1-201ENST00000328560 KRTAP12-1P59990 96 aa6.81□□□□□ -1.32
ATP2C1-201ENST00000328560 ABCA13Q86UQ4 5058 aa6.81□□□□□ -1.32
ATP2C1-201ENST00000328560 M0QZ58 72 aa6.77□□□□□ -1.33
ATP2C1-201ENST00000328560 LUZP6Q538Z0 58 aa6.73□□□□□ -1.33
ATP2C1-201ENST00000328560 R4GN34 69 aa6.73□□□□□ -1.33
ATP2C1-201ENST00000328560 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
ATP2C1-201ENST00000328560 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
ATP2C1-201ENST00000328560 HERC2O95714 4834 aa6.55□□□□□ -1.36
ATP2C1-201ENST00000328560 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
ATP2C1-201ENST00000328560 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
ATP2C1-201ENST00000328560 MUC2Q02817 5179 aa6.48□□□□□ -1.37
ATP2C1-201ENST00000328560 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
ATP2C1-201ENST00000328560 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
ATP2C1-201ENST00000328560 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.39
ATP2C1-201ENST00000328560 M0R2T5 61 aa6.33□□□□□ -1.4
ATP2C1-201ENST00000328560 HERC1Q15751 4861 aa6.24□□□□□ -1.41
ATP2C1-201ENST00000328560 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
ATP2C1-201ENST00000328560 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
ATP2C1-201ENST00000328560 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
ATP2C1-201ENST00000328560 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
ATP2C1-201ENST00000328560 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
ATP2C1-201ENST00000328560 TNP1P09430 55 aa6.1□□□□□ -1.43
ATP2C1-201ENST00000328560 HMCN2Q8NDA2 5059 aa6.07□□□□□ -1.44
ATP2C1-201ENST00000328560 LCE2CQ5TA81 110 aa6.06□□□□□ -1.44
ATP2C1-201ENST00000328560 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
ATP2C1-201ENST00000328560 RNF213Q63HN8 5207 aa6.02□□□□□ -1.45
ATP2C1-201ENST00000328560 MT1HP80294 61 aa5.97□□□□□ -1.45
ATP2C1-201ENST00000328560 KRTAP19-1Q8IUB9 90 aa5.95□□□□□ -1.46
ATP2C1-201ENST00000328560 UBR4Q5T4S7 5183 aa5.94□□□□□ -1.46
ATP2C1-201ENST00000328560 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
ATP2C1-201ENST00000328560 MT1FP04733 61 aa5.88□□□□□ -1.47
ATP2C1-201ENST00000328560 MT2AP02795 61 aa5.86□□□□□ -1.47
ATP2C1-201ENST00000328560 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
ATP2C1-201ENST00000328560 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
ATP2C1-201ENST00000328560 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
ATP2C1-201ENST00000328560 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
ATP2C1-201ENST00000328560 MT1BP07438 61 aa5.64□□□□□ -1.51
ATP2C1-201ENST00000328560 SPRR5A0A1B0GTR4 108 aa5.62□□□□□ -1.51
ATP2C1-201ENST00000328560 PRO2289Q9P1D8 64 aa5.62□□□□□ -1.51
ATP2C1-201ENST00000328560 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
ATP2C1-201ENST00000328560 MT1XP80297 61 aa5.6□□□□□ -1.51
ATP2C1-201ENST00000328560 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
ATP2C1-201ENST00000328560 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
ATP2C1-201ENST00000328560 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
ATP2C1-201ENST00000328560 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
ATP2C1-201ENST00000328560 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
ATP2C1-201ENST00000328560 USH2AO75445 5202 aa5.39□□□□□ -1.55
ATP2C1-201ENST00000328560 LCE2BO14633 110 aa5.36□□□□□ -1.55
ATP2C1-201ENST00000328560 KMT2DO14686 5537 aa5.3□□□□□ -1.56
ATP2C1-201ENST00000328560 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
ATP2C1-201ENST00000328560 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
ATP2C1-201ENST00000328560 INE1O15225 51 aa5.24□□□□□ -1.57
ATP2C1-201ENST00000328560 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
ATP2C1-201ENST00000328560 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
ATP2C1-201ENST00000328560 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
ATP2C1-201ENST00000328560 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
ATP2C1-201ENST00000328560 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
ATP2C1-201ENST00000328560 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
ATP2C1-201ENST00000328560 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
ATP2C1-201ENST00000328560 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
ATP2C1-201ENST00000328560 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
ATP2C1-201ENST00000328560 MT1LQ93083 61 aa4.85□□□□□ -1.63
ATP2C1-201ENST00000328560 MT1EP04732 61 aa4.84□□□□□ -1.63
ATP2C1-201ENST00000328560 KRTAP19-6Q3LI70 58 aa4.84□□□□□ -1.63
ATP2C1-201ENST00000328560 KRTAP19-4Q3LI73 84 aa4.81□□□□□ -1.64
ATP2C1-201ENST00000328560 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
ATP2C1-201ENST00000328560 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms