RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 HERC2O95714 4834 aa6.48□□□□□ -1.37
CDCA8-201ENST00000327331 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
CDCA8-201ENST00000327331 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
CDCA8-201ENST00000327331 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
CDCA8-201ENST00000327331 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
CDCA8-201ENST00000327331 J3QL48 77 aa6.34□□□□□ -1.39
CDCA8-201ENST00000327331 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
CDCA8-201ENST00000327331 LPAP08519 4548 aa6.26□□□□□ -1.41
CDCA8-201ENST00000327331 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
CDCA8-201ENST00000327331 IGKV2D-30A0A075B6S6 120 aa6.25□□□□□ -1.41
CDCA8-201ENST00000327331 A8MUU9 505 aa6.24□□□□□ -1.41
CDCA8-201ENST00000327331 ROMO1P60602 79 aa6.24□□□□□ -1.41
CDCA8-201ENST00000327331 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.41
CDCA8-201ENST00000327331 XP32Q5T750 250 aa6.21□□□□□ -1.42
CDCA8-201ENST00000327331 HERC1Q15751 4861 aa6.2□□□□□ -1.42
CDCA8-201ENST00000327331 H0YAA0 97 aa6.19□□□□□ -1.42
CDCA8-201ENST00000327331 LRP2P98164 4655 aa6.16□□□□□ -1.42
CDCA8-201ENST00000327331 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
CDCA8-201ENST00000327331 RPL37P61927 97 aaKnown RBP6.13□□□□□ -1.43
CDCA8-201ENST00000327331 A0A1B0GU33 70 aa6.09□□□□□ -1.43
CDCA8-201ENST00000327331 P0C880 135 aa6.07□□□□□ -1.44
CDCA8-201ENST00000327331 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
CDCA8-201ENST00000327331 H1FX-AS1Q4G0G2 97 aa6.05□□□□□ -1.44
CDCA8-201ENST00000327331 HMCN2Q8NDA2 5059 aa6.03□□□□□ -1.44
CDCA8-201ENST00000327331 K7ERS5 55 aa6□□□□□ -1.45
CDCA8-201ENST00000327331 MUC2Q02817 5179 aa5.94□□□□□ -1.46
CDCA8-201ENST00000327331 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
CDCA8-201ENST00000327331 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
CDCA8-201ENST00000327331 KRTAP3-1Q9BYR8 98 aa5.92□□□□□ -1.46
CDCA8-201ENST00000327331 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
CDCA8-201ENST00000327331 SPINT4Q6UDR6 99 aa5.91□□□□□ -1.46
CDCA8-201ENST00000327331 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
CDCA8-201ENST00000327331 MUC17Q685J3 4493 aa5.87□□□□□ -1.47
CDCA8-201ENST00000327331 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
CDCA8-201ENST00000327331 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
CDCA8-201ENST00000327331 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
CDCA8-201ENST00000327331 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
CDCA8-201ENST00000327331 A0A0D9SG42 100 aa5.75□□□□□ -1.49
CDCA8-201ENST00000327331 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
CDCA8-201ENST00000327331 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
CDCA8-201ENST00000327331 S4R3F8 94 aa5.71□□□□□ -1.49
CDCA8-201ENST00000327331 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
CDCA8-201ENST00000327331 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
CDCA8-201ENST00000327331 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
CDCA8-201ENST00000327331 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
CDCA8-201ENST00000327331 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
CDCA8-201ENST00000327331 KRTAP12-2P59991 146 aa5.6□□□□□ -1.51
CDCA8-201ENST00000327331 LCE2CQ5TA81 110 aa5.59□□□□□ -1.51
CDCA8-201ENST00000327331 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
CDCA8-201ENST00000327331 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
CDCA8-201ENST00000327331 MT1HP80294 61 aa5.48□□□□□ -1.53
CDCA8-201ENST00000327331 M0R2T5 61 aa5.47□□□□□ -1.53
CDCA8-201ENST00000327331 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
CDCA8-201ENST00000327331 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
CDCA8-201ENST00000327331 M0QZ58 72 aa5.37□□□□□ -1.55
CDCA8-201ENST00000327331 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
CDCA8-201ENST00000327331 R4GN34 69 aa5.28□□□□□ -1.56
CDCA8-201ENST00000327331 MT2AP02795 61 aa5.26□□□□□ -1.57
CDCA8-201ENST00000327331 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
CDCA8-201ENST00000327331 MT1FP04733 61 aa5.26□□□□□ -1.57
CDCA8-201ENST00000327331 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
CDCA8-201ENST00000327331 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
CDCA8-201ENST00000327331 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
CDCA8-201ENST00000327331 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
CDCA8-201ENST00000327331 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
CDCA8-201ENST00000327331 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
CDCA8-201ENST00000327331 LCE2BO14633 110 aa4.97□□□□□ -1.61
CDCA8-201ENST00000327331 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.61
CDCA8-201ENST00000327331 USH2AO75445 5202 aa4.96□□□□□ -1.62
CDCA8-201ENST00000327331 MT1BP07438 61 aa4.94□□□□□ -1.62
CDCA8-201ENST00000327331 KRTAP19-8Q3LI54 63 aa4.94□□□□□ -1.62
CDCA8-201ENST00000327331 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
CDCA8-201ENST00000327331 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
CDCA8-201ENST00000327331 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
CDCA8-201ENST00000327331 TNP1P09430 55 aa4.81□□□□□ -1.64
CDCA8-201ENST00000327331 PRO2289Q9P1D8 64 aa4.79□□□□□ -1.64
CDCA8-201ENST00000327331 MT1XP80297 61 aa4.79□□□□□ -1.64
CDCA8-201ENST00000327331 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
CDCA8-201ENST00000327331 LCE2DQ5TA82 110 aaPredicted RBP4.78□□□□□ -1.64
CDCA8-201ENST00000327331 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
CDCA8-201ENST00000327331 INE1O15225 51 aa4.65□□□□□ -1.66
CDCA8-201ENST00000327331 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
CDCA8-201ENST00000327331 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
CDCA8-201ENST00000327331 KMT2DO14686 5537 aa4.59□□□□□ -1.68
CDCA8-201ENST00000327331 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
CDCA8-201ENST00000327331 LCE3AQ5TA76 89 aa4.54□□□□□ -1.68
CDCA8-201ENST00000327331 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
CDCA8-201ENST00000327331 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
CDCA8-201ENST00000327331 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
CDCA8-201ENST00000327331 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
CDCA8-201ENST00000327331 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
CDCA8-201ENST00000327331 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
CDCA8-201ENST00000327331 KRTAP19-5Q3LI72 72 aa4.35□□□□□ -1.71
CDCA8-201ENST00000327331 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
CDCA8-201ENST00000327331 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
CDCA8-201ENST00000327331 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
CDCA8-201ENST00000327331 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
CDCA8-201ENST00000327331 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
CDCA8-201ENST00000327331 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
CDCA8-201ENST00000327331 MT1EP04732 61 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms