RNA–Protein interactions for RNA: ENST00000326407.10

ITM2C-201, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-201ENST00000326407 SEC61GP60059 68 aa8.99□□□□□ -0.97
ITM2C-201ENST00000326407 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
ITM2C-201ENST00000326407 SPATA8Q6RVD6 105 aa8.94□□□□□ -0.98
ITM2C-201ENST00000326407 UQCR11O14957 56 aa8.92□□□□□ -0.98
ITM2C-201ENST00000326407 MIR22HGQ0VDD5 57 aa8.89□□□□□ -0.99
ITM2C-201ENST00000326407 KRTAP3-1Q9BYR8 98 aa8.85□□□□□ -0.99
ITM2C-201ENST00000326407 HMCN2Q8NDA2 5059 aa8.81□□□□□ -1
ITM2C-201ENST00000326407 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
ITM2C-201ENST00000326407 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
ITM2C-201ENST00000326407 RBM12B-AS1Q9P1G2 102 aa8.7□□□□□ -1.02
ITM2C-201ENST00000326407 XP32Q5T750 250 aa8.68□□□□□ -1.02
ITM2C-201ENST00000326407 LPAP08519 4548 aa8.66□□□□□ -1.02
ITM2C-201ENST00000326407 LRP2P98164 4655 aa8.64□□□□□ -1.03
ITM2C-201ENST00000326407 H0YAA0 97 aa8.64□□□□□ -1.03
ITM2C-201ENST00000326407 A0A1B0GU33 70 aa8.62□□□□□ -1.03
ITM2C-201ENST00000326407 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
ITM2C-201ENST00000326407 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
ITM2C-201ENST00000326407 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
ITM2C-201ENST00000326407 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
ITM2C-201ENST00000326407 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
ITM2C-201ENST00000326407 UBR4Q5T4S7 5183 aa8.49□□□□□ -1.05
ITM2C-201ENST00000326407 S4R3F8 94 aa8.45□□□□□ -1.06
ITM2C-201ENST00000326407 MUC17Q685J3 4493 aa8.4□□□□□ -1.06
ITM2C-201ENST00000326407 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
ITM2C-201ENST00000326407 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
ITM2C-201ENST00000326407 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
ITM2C-201ENST00000326407 K7ERS5 55 aa8.34□□□□□ -1.07
ITM2C-201ENST00000326407 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
ITM2C-201ENST00000326407 LINC01554Q52M75 96 aa8.29□□□□□ -1.08
ITM2C-201ENST00000326407 KRTAP13-4Q3LI77 160 aa8.28□□□□□ -1.08
ITM2C-201ENST00000326407 RNF213Q63HN8 5207 aa8.28□□□□□ -1.08
ITM2C-201ENST00000326407 MUC2Q02817 5179 aa8.24□□□□□ -1.09
ITM2C-201ENST00000326407 P0C880 135 aa8.23□□□□□ -1.09
ITM2C-201ENST00000326407 A0A0D9SG42 100 aa8.19□□□□□ -1.1
ITM2C-201ENST00000326407 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
ITM2C-201ENST00000326407 KRTAP4-1Q9BYQ7 146 aa8.15□□□□□ -1.1
ITM2C-201ENST00000326407 ROMO1P60602 79 aa8.13□□□□□ -1.11
ITM2C-201ENST00000326407 KRTAP9-2Q9BYQ4 174 aa8.02□□□□□ -1.12
ITM2C-201ENST00000326407 M0QZ58 72 aa8.02□□□□□ -1.13
ITM2C-201ENST00000326407 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
ITM2C-201ENST00000326407 KRTAP12-2P59991 146 aa8□□□□□ -1.13
ITM2C-201ENST00000326407 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
ITM2C-201ENST00000326407 FAT4Q6V0I7 4981 aa7.99□□□□□ -1.13
ITM2C-201ENST00000326407 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
ITM2C-201ENST00000326407 H3BS24 57 aa7.96□□□□□ -1.14
ITM2C-201ENST00000326407 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
ITM2C-201ENST00000326407 KRTAP19-2Q3LHN2 52 aa7.91□□□□□ -1.14
ITM2C-201ENST00000326407 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
ITM2C-201ENST00000326407 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
ITM2C-201ENST00000326407 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
ITM2C-201ENST00000326407 R4GN34 69 aa7.82□□□□□ -1.16
ITM2C-201ENST00000326407 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
ITM2C-201ENST00000326407 LCE2DQ5TA82 110 aaPredicted RBP7.76□□□□□ -1.17
ITM2C-201ENST00000326407 MT1HP80294 61 aa7.72□□□□□ -1.17
ITM2C-201ENST00000326407 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
ITM2C-201ENST00000326407 M0R2T5 61 aa7.58□□□□□ -1.2
ITM2C-201ENST00000326407 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
ITM2C-201ENST00000326407 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
ITM2C-201ENST00000326407 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.23
ITM2C-201ENST00000326407 KRTAP9-8Q9BYQ0 159 aa7.38□□□□□ -1.23
ITM2C-201ENST00000326407 MT2AP02795 61 aa7.32□□□□□ -1.24
ITM2C-201ENST00000326407 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
ITM2C-201ENST00000326407 MT1FP04733 61 aa7.26□□□□□ -1.25
ITM2C-201ENST00000326407 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
ITM2C-201ENST00000326407 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
ITM2C-201ENST00000326407 SPRR2GQ9BYE4 73 aa7.17□□□□□ -1.26
ITM2C-201ENST00000326407 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
ITM2C-201ENST00000326407 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
ITM2C-201ENST00000326407 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
ITM2C-201ENST00000326407 TNP1P09430 55 aa7.13□□□□□ -1.27
ITM2C-201ENST00000326407 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
ITM2C-201ENST00000326407 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
ITM2C-201ENST00000326407 KRTAP23-1A1A580 65 aa7.07□□□□□ -1.28
ITM2C-201ENST00000326407 KRTAP9-7A8MTY7 169 aa7.06□□□□□ -1.28
ITM2C-201ENST00000326407 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.04□□□□□ -1.28
ITM2C-201ENST00000326407 LCE2BO14633 110 aa7□□□□□ -1.29
ITM2C-201ENST00000326407 USH2AO75445 5202 aa6.97□□□□□ -1.29
ITM2C-201ENST00000326407 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
ITM2C-201ENST00000326407 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
ITM2C-201ENST00000326407 MT1BP07438 61 aa6.81□□□□□ -1.32
ITM2C-201ENST00000326407 LUZP6Q538Z0 58 aa6.8□□□□□ -1.32
ITM2C-201ENST00000326407 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
ITM2C-201ENST00000326407 SPRR5A0A1B0GTR4 108 aa6.73□□□□□ -1.33
ITM2C-201ENST00000326407 KRTAP10-5P60370 271 aa6.7□□□□□ -1.34
ITM2C-201ENST00000326407 MT1XP80297 61 aa6.7□□□□□ -1.34
ITM2C-201ENST00000326407 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
ITM2C-201ENST00000326407 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
ITM2C-201ENST00000326407 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
ITM2C-201ENST00000326407 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
ITM2C-201ENST00000326407 PRO2289Q9P1D8 64 aa6.58□□□□□ -1.36
ITM2C-201ENST00000326407 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
ITM2C-201ENST00000326407 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
ITM2C-201ENST00000326407 MACF1Q9UPN3 7388 aaKnown RBP6.46□□□□□ -1.37
ITM2C-201ENST00000326407 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
ITM2C-201ENST00000326407 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
ITM2C-201ENST00000326407 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
ITM2C-201ENST00000326407 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
ITM2C-201ENST00000326407 KMT2DO14686 5537 aa6.16□□□□□ -1.42
ITM2C-201ENST00000326407 NEBP20929 6669 aa6.16□□□□□ -1.42
ITM2C-201ENST00000326407 KRTAP5-9P26371 169 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms