RNA–Protein interactions for RNA: ENST00000324022.14

GYPA-201, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 751 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-201ENST00000324022 CACNA1AO00555 2505 aa1.58□□□□□ -2.16
GYPA-201ENST00000324022 MAST4O15021 2626 aa1.58□□□□□ -2.16
GYPA-201ENST00000324022 LAMA5O15230 3695 aa1.58□□□□□ -2.16
GYPA-201ENST00000324022 TENM3Q9P273 2699 aa1.57□□□□□ -2.16
GYPA-201ENST00000324022 FLNCQ14315 2725 aa1.57□□□□□ -2.16
GYPA-201ENST00000324022 VPS13CQ709C8 3753 aa1.57□□□□□ -2.16
GYPA-201ENST00000324022 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
GYPA-201ENST00000324022 IGSF10Q6WRI0 2623 aa1.57□□□□□ -2.16
GYPA-201ENST00000324022 VWFP04275 2813 aa1.57□□□□□ -2.16
GYPA-201ENST00000324022 FBN1P35555 2871 aaKnown RBP1.57□□□□□ -2.16
GYPA-201ENST00000324022 TGP01266 2768 aa1.56□□□□□ -2.16
GYPA-201ENST00000324022 SRRM2Q9UQ35 2752 aaKnown RBP1.56□□□□□ -2.16
GYPA-201ENST00000324022 SVEP1Q4LDE5 3571 aa1.56□□□□□ -2.16
GYPA-201ENST00000324022 NBPF19A0A087WUL8 3843 aa1.56□□□□□ -2.16
GYPA-201ENST00000324022 PKD1L1Q8TDX9 2849 aa1.56□□□□□ -2.16
GYPA-201ENST00000324022 RELNP78509 3460 aa1.56□□□□□ -2.16
GYPA-201ENST00000324022 PDZD2O15018 2839 aa1.55□□□□□ -2.16
GYPA-201ENST00000324022 ITPR2Q14571 2701 aa1.55□□□□□ -2.16
GYPA-201ENST00000324022 NIPBLQ6KC79 2804 aaeCLIP1.55□□□□□ -2.16
GYPA-201ENST00000324022 MEGF8Q7Z7M0 2845 aa1.55□□□□□ -2.16
GYPA-201ENST00000324022 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
GYPA-201ENST00000324022 ATRQ13535 2644 aa1.54□□□□□ -2.16
GYPA-201ENST00000324022 R4GN34 69 aa1.54□□□□□ -2.16
GYPA-201ENST00000324022 DNAH1Q9P2D7 4330 aa1.54□□□□□ -2.16
GYPA-201ENST00000324022 FLNBO75369 2602 aaKnown RBP1.53□□□□□ -2.16
GYPA-201ENST00000324022 LCE1FQ5T754 118 aa1.53□□□□□ -2.16
GYPA-201ENST00000324022 NSD1Q96L73 2696 aaPredicted RBP1.53□□□□□ -2.16
GYPA-201ENST00000324022 PRO2289Q9P1D8 64 aa1.53□□□□□ -2.16
GYPA-201ENST00000324022 NBEAL1Q6ZS30 2694 aa1.53□□□□□ -2.17
GYPA-201ENST00000324022 DNAH3Q8TD57 4116 aa1.52□□□□□ -2.17
GYPA-201ENST00000324022 STAB2Q8WWQ8 2551 aa1.52□□□□□ -2.17
GYPA-201ENST00000324022 A0A1B0GVY2 172 aa1.51□□□□□ -2.17
GYPA-201ENST00000324022 INE1O15225 51 aa1.51□□□□□ -2.17
GYPA-201ENST00000324022 MUC3AQ02505 3323 aa1.5□□□□□ -2.17
GYPA-201ENST00000324022 USP24Q9UPU5 2620 aa1.5□□□□□ -2.17
GYPA-201ENST00000324022 CSMD2Q7Z408 3487 aa1.5□□□□□ -2.17
GYPA-201ENST00000324022 MGAM2Q2M2H8 2515 aa1.49□□□□□ -2.17
GYPA-201ENST00000324022 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
GYPA-201ENST00000324022 TRRAPQ9Y4A5 3859 aa1.49□□□□□ -2.17
GYPA-201ENST00000324022 NOTCH1P46531 2555 aa1.48□□□□□ -2.17
GYPA-201ENST00000324022 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
GYPA-201ENST00000324022 CMYA5Q8N3K9 4069 aa1.48□□□□□ -2.17
GYPA-201ENST00000324022 ANK2Q01484 3957 aa1.48□□□□□ -2.17
GYPA-201ENST00000324022 TNP1P09430 55 aa1.47□□□□□ -2.17
GYPA-201ENST00000324022 LYSTQ99698 3801 aa1.47□□□□□ -2.17
GYPA-201ENST00000324022 DMBT1Q9UGM3 2413 aaPredicted RBP1.46□□□□□ -2.18
GYPA-201ENST00000324022 SMR3BP02814 79 aaPredicted RBP1.46□□□□□ -2.18
GYPA-201ENST00000324022 FRAS1Q86XX4 4008 aa1.46□□□□□ -2.18
GYPA-201ENST00000324022 PRKDCP78527 4128 aaKnown RBP1.46□□□□□ -2.18
GYPA-201ENST00000324022 DNAH7Q8WXX0 4024 aa1.45□□□□□ -2.18
GYPA-201ENST00000324022 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
GYPA-201ENST00000324022 DYNC2H1Q8NCM8 4307 aaKnown RBP1.45□□□□□ -2.18
GYPA-201ENST00000324022 DNAH17Q9UFH2 4485 aa1.45□□□□□ -2.18
GYPA-201ENST00000324022 STAB1Q9NY15 2570 aa1.45□□□□□ -2.18
GYPA-201ENST00000324022 CUBNO60494 3623 aa1.45□□□□□ -2.18
GYPA-201ENST00000324022 DNAH10Q8IVF4 4471 aa1.44□□□□□ -2.18
GYPA-201ENST00000324022 SPRR5A0A1B0GTR4 108 aa1.44□□□□□ -2.18
GYPA-201ENST00000324022 Q5VSD8 79 aa1.44□□□□□ -2.18
GYPA-201ENST00000324022 COL7A1Q02388 2944 aa1.44□□□□□ -2.18
GYPA-201ENST00000324022 HUWE1Q7Z6Z7 4374 aaKnown RBP1.44□□□□□ -2.18
GYPA-201ENST00000324022 DNAH11Q96DT5 4516 aa1.43□□□□□ -2.18
GYPA-201ENST00000324022 DNAH9Q9NYC9 4486 aa1.43□□□□□ -2.18
GYPA-201ENST00000324022 HECTD4Q9Y4D8 3996 aa1.42□□□□□ -2.18
GYPA-201ENST00000324022 ZNF469Q96JG9 3925 aaPredicted RBP1.42□□□□□ -2.18
GYPA-201ENST00000324022 DNAH6Q9C0G6 4158 aa1.42□□□□□ -2.18
GYPA-201ENST00000324022 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
GYPA-201ENST00000324022 KRTAP10-4P60372 401 aaPredicted RBP1.4□□□□□ -2.19
GYPA-201ENST00000324022 LCE3CQ5T5A8 94 aa1.4□□□□□ -2.19
GYPA-201ENST00000324022 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
GYPA-201ENST00000324022 DNAH2Q9P225 4427 aa1.39□□□□□ -2.19
GYPA-201ENST00000324022 SACSQ9NZJ4 4579 aa1.37□□□□□ -2.19
GYPA-201ENST00000324022 CSMD3Q7Z407 3707 aa1.36□□□□□ -2.19
GYPA-201ENST00000324022 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
GYPA-201ENST00000324022 KMT2AQ03164 3969 aa1.33□□□□□ -2.2
GYPA-201ENST00000324022 PLECQ15149 4684 aaKnown RBP1.32□□□□□ -2.2
GYPA-201ENST00000324022 PKHD1P08F94 4074 aa1.32□□□□□ -2.2
GYPA-201ENST00000324022 PKHD1L1Q86WI1 4243 aa1.31□□□□□ -2.2
GYPA-201ENST00000324022 DNAH5Q8TE73 4624 aa1.29□□□□□ -2.2
GYPA-201ENST00000324022 STARD9Q9P2P6 4700 aa1.29□□□□□ -2.2
GYPA-201ENST00000324022 PKD1P98161 4303 aa1.29□□□□□ -2.2
GYPA-201ENST00000324022 MT1HL1P0DM35 61 aa1.28□□□□□ -2.2
GYPA-201ENST00000324022 TNXBP22105 4242 aa1.28□□□□□ -2.2
GYPA-201ENST00000324022 FLGP20930 4061 aaPredicted RBP1.28□□□□□ -2.21
GYPA-201ENST00000324022 VPS13BQ7Z7G8 4022 aa1.27□□□□□ -2.21
GYPA-201ENST00000324022 LCE3EQ5T5B0 92 aa1.26□□□□□ -2.21
GYPA-201ENST00000324022 KRTAP8-1Q8IUC2 63 aa1.26□□□□□ -2.21
GYPA-201ENST00000324022 LRP1Q07954 4544 aaKnown RBP1.26□□□□□ -2.21
GYPA-201ENST00000324022 APOBP04114 4563 aaKnown RBP1.25□□□□□ -2.21
GYPA-201ENST00000324022 FAT2Q9NYQ8 4349 aa1.25□□□□□ -2.21
GYPA-201ENST00000324022 HSPG2P98160 4391 aa1.25□□□□□ -2.21
GYPA-201ENST00000324022 DYNC1H1Q14204 4646 aaKnown RBP1.24□□□□□ -2.21
GYPA-201ENST00000324022 LRP1BQ9NZR2 4599 aa1.24□□□□□ -2.21
GYPA-201ENST00000324022 KRTAP12-3P60328 96 aa1.23□□□□□ -2.21
GYPA-201ENST00000324022 MYCBP2O75592 4640 aa1.23□□□□□ -2.21
GYPA-201ENST00000324022 FAT1Q14517 4588 aa1.23□□□□□ -2.21
GYPA-201ENST00000324022 KRTAP10-10P60014 251 aa1.22□□□□□ -2.21
GYPA-201ENST00000324022 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
GYPA-201ENST00000324022 FAT3Q8TDW7 4589 aa1.22□□□□□ -2.21
GYPA-201ENST00000324022 M0R2T5 61 aa1.2□□□□□ -2.22
GYPA-201ENST00000324022 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms