RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 SPATA8Q6RVD6 105 aa11.26□□□□□ -0.61
SPHK1-201ENST00000323374 MIR22HGQ0VDD5 57 aa11.24□□□□□ -0.61
SPHK1-201ENST00000323374 TPRXLQ17RH7 258 aa11.21□□□□□ -0.62
SPHK1-201ENST00000323374 KRTAP4-5Q9BYR2 181 aa11.2□□□□□ -0.62
SPHK1-201ENST00000323374 A0A1B0GU33 70 aa11.03□□□□□ -0.64
SPHK1-201ENST00000323374 KRTAP3-3Q9BYR6 98 aa11.03□□□□□ -0.64
SPHK1-201ENST00000323374 S4R3F8 94 aa11.03□□□□□ -0.64
SPHK1-201ENST00000323374 LRP2P98164 4655 aa11.01□□□□□ -0.65
SPHK1-201ENST00000323374 H1FX-AS1Q4G0G2 97 aa11.01□□□□□ -0.65
SPHK1-201ENST00000323374 ABCA13Q86UQ4 5058 aa11□□□□□ -0.65
SPHK1-201ENST00000323374 RBM12B-AS1Q9P1G2 102 aa10.99□□□□□ -0.65
SPHK1-201ENST00000323374 H0YAA0 97 aa10.97□□□□□ -0.65
SPHK1-201ENST00000323374 LPAP08519 4548 aa10.96□□□□□ -0.65
SPHK1-201ENST00000323374 J3QL48 77 aa10.92□□□□□ -0.66
SPHK1-201ENST00000323374 HERC2O95714 4834 aa10.83□□□□□ -0.68
SPHK1-201ENST00000323374 KRTAP10-6P60371 365 aaPredicted RBP10.82□□□□□ -0.68
SPHK1-201ENST00000323374 SEC61BP60468 96 aaKnown RBP10.81□□□□□ -0.68
SPHK1-201ENST00000323374 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
SPHK1-201ENST00000323374 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
SPHK1-201ENST00000323374 PRAC1Q96KF2 57 aa10.74□□□□□ -0.69
SPHK1-201ENST00000323374 ADM2Q7Z4H4 148 aa10.72□□□□□ -0.69
SPHK1-201ENST00000323374 CSAG1Q6PB30 78 aa10.7□□□□□ -0.7
SPHK1-201ENST00000323374 P0C880 135 aa10.66□□□□□ -0.7
SPHK1-201ENST00000323374 KRTAP13-4Q3LI77 160 aa10.63□□□□□ -0.71
SPHK1-201ENST00000323374 K7ERS5 55 aa10.61□□□□□ -0.71
SPHK1-201ENST00000323374 MUC17Q685J3 4493 aa10.61□□□□□ -0.71
SPHK1-201ENST00000323374 KRTAP4-1Q9BYQ7 146 aa10.57□□□□□ -0.72
SPHK1-201ENST00000323374 A0A0D9SG42 100 aa10.52□□□□□ -0.73
SPHK1-201ENST00000323374 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
SPHK1-201ENST00000323374 M0QZ58 72 aa10.39□□□□□ -0.75
SPHK1-201ENST00000323374 KRTAP19-2Q3LHN2 52 aa10.36□□□□□ -0.75
SPHK1-201ENST00000323374 PCLOQ9Y6V0 5065 aa10.27□□□□□ -0.76
SPHK1-201ENST00000323374 ROMO1P60602 79 aa10.27□□□□□ -0.77
SPHK1-201ENST00000323374 KRTAP12-2P59991 146 aa10.26□□□□□ -0.77
SPHK1-201ENST00000323374 HERC1Q15751 4861 aa10.24□□□□□ -0.77
SPHK1-201ENST00000323374 KRTAP12-1P59990 96 aa10.24□□□□□ -0.77
SPHK1-201ENST00000323374 HMCN2Q8NDA2 5059 aa10.23□□□□□ -0.77
SPHK1-201ENST00000323374 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
SPHK1-201ENST00000323374 R4GN34 69 aa10.21□□□□□ -0.77
SPHK1-201ENST00000323374 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SPHK1-201ENST00000323374 MUC2Q02817 5179 aa10.17□□□□□ -0.78
SPHK1-201ENST00000323374 LORP23490 312 aaPredicted RBP10.09□□□□□ -0.79
SPHK1-201ENST00000323374 FLGP20930 4061 aaPredicted RBP10.08□□□□□ -0.8
SPHK1-201ENST00000323374 CRIPTQ9P021 101 aa10.07□□□□□ -0.8
SPHK1-201ENST00000323374 LCE2CQ5TA81 110 aa9.89□□□□□ -0.83
SPHK1-201ENST00000323374 C10orf95Q9H7T3 257 aa9.81□□□□□ -0.84
SPHK1-201ENST00000323374 FAT4Q6V0I7 4981 aa9.72□□□□□ -0.85
SPHK1-201ENST00000323374 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
SPHK1-201ENST00000323374 UBR4Q5T4S7 5183 aa9.7□□□□□ -0.86
SPHK1-201ENST00000323374 M0R2T5 61 aa9.67□□□□□ -0.86
SPHK1-201ENST00000323374 MT1HP80294 61 aa9.66□□□□□ -0.86
SPHK1-201ENST00000323374 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
SPHK1-201ENST00000323374 SPRR2GQ9BYE4 73 aa9.5□□□□□ -0.89
SPHK1-201ENST00000323374 H3BS24 57 aa9.49□□□□□ -0.89
SPHK1-201ENST00000323374 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
SPHK1-201ENST00000323374 MT2AP02795 61 aa9.41□□□□□ -0.9
SPHK1-201ENST00000323374 KRTAP10-10P60014 251 aa9.39□□□□□ -0.91
SPHK1-201ENST00000323374 MT1FP04733 61 aa9.38□□□□□ -0.91
SPHK1-201ENST00000323374 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
SPHK1-201ENST00000323374 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
SPHK1-201ENST00000323374 KRTAP15-1Q3LI76 137 aa9.29□□□□□ -0.92
SPHK1-201ENST00000323374 PP632Q6XCG6 107 aa9.28□□□□□ -0.92
SPHK1-201ENST00000323374 TNP1P09430 55 aa9.25□□□□□ -0.93
SPHK1-201ENST00000323374 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
SPHK1-201ENST00000323374 KRTAP23-1A1A580 65 aa9.1□□□□□ -0.95
SPHK1-201ENST00000323374 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
SPHK1-201ENST00000323374 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
SPHK1-201ENST00000323374 MT1BP07438 61 aa9□□□□□ -0.97
SPHK1-201ENST00000323374 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
SPHK1-201ENST00000323374 MT1XP80297 61 aa8.85□□□□□ -0.99
SPHK1-201ENST00000323374 LCE2AQ5TA79 106 aaPredicted RBP8.83□□□□□ -1
SPHK1-201ENST00000323374 LCE3AQ5TA76 89 aa8.76□□□□□ -1.01
SPHK1-201ENST00000323374 LCE2BO14633 110 aa8.68□□□□□ -1.02
SPHK1-201ENST00000323374 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
SPHK1-201ENST00000323374 KRTAP10-12P60413 245 aa8.59□□□□□ -1.03
SPHK1-201ENST00000323374 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.03
SPHK1-201ENST00000323374 KRTAP10-7P60409 375 aaPredicted RBP8.55□□□□□ -1.04
SPHK1-201ENST00000323374 LUZP6Q538Z0 58 aa8.51□□□□□ -1.05
SPHK1-201ENST00000323374 SPRR5A0A1B0GTR4 108 aa8.46□□□□□ -1.06
SPHK1-201ENST00000323374 USH2AO75445 5202 aa8.4□□□□□ -1.07
SPHK1-201ENST00000323374 KRTAP12-3P60328 96 aa8.39□□□□□ -1.07
SPHK1-201ENST00000323374 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.11
SPHK1-201ENST00000323374 A0A0A0MQY5 61 aa8.08□□□□□ -1.12
SPHK1-201ENST00000323374 KRTAP4-8A0A0G2JLE6 195 aa8.08□□□□□ -1.12
SPHK1-201ENST00000323374 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
SPHK1-201ENST00000323374 KMT2DO14686 5537 aa8.06□□□□□ -1.12
SPHK1-201ENST00000323374 SSPOA2VEC9 5147 aa8.03□□□□□ -1.12
SPHK1-201ENST00000323374 KRTAP19-6Q3LI70 58 aa7.97□□□□□ -1.13
SPHK1-201ENST00000323374 KRTAP19-7Q3SYF9 63 aa7.89□□□□□ -1.15
SPHK1-201ENST00000323374 LCE3CQ5T5A8 94 aa7.88□□□□□ -1.15
SPHK1-201ENST00000323374 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
SPHK1-201ENST00000323374 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
SPHK1-201ENST00000323374 MT1EP04732 61 aa7.7□□□□□ -1.18
SPHK1-201ENST00000323374 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
SPHK1-201ENST00000323374 MT1LQ93083 61 aa7.64□□□□□ -1.19
SPHK1-201ENST00000323374 KRTAP4-7Q9BYR0 210 aa7.54□□□□□ -1.2
SPHK1-201ENST00000323374 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
SPHK1-201ENST00000323374 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
SPHK1-201ENST00000323374 INE1O15225 51 aa7.34□□□□□ -1.23
SPHK1-201ENST00000323374 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms