RNA–Protein interactions for RNA: ENST00000321949.12

CRTC1-201, Transcript of CREB regulated transcription coactivator 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CRTC1, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC1-201ENST00000321949 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
CRTC1-201ENST00000321949 HSPG2P98160 4391 aa9.27□□□□□ -0.93
CRTC1-201ENST00000321949 Q5VSD8 79 aa9.27□□□□□ -0.93
CRTC1-201ENST00000321949 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
CRTC1-201ENST00000321949 K7ERS5 55 aa9.21□□□□□ -0.94
CRTC1-201ENST00000321949 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
CRTC1-201ENST00000321949 TNXBP22105 4242 aa9.2□□□□□ -0.94
CRTC1-201ENST00000321949 RYR1P21817 5038 aa9.2□□□□□ -0.94
CRTC1-201ENST00000321949 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
CRTC1-201ENST00000321949 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
CRTC1-201ENST00000321949 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
CRTC1-201ENST00000321949 A0A0D9SG42 100 aa9.15□□□□□ -0.94
CRTC1-201ENST00000321949 KRTAP17-1Q9BYP8 105 aa9.1□□□□□ -0.95
CRTC1-201ENST00000321949 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
CRTC1-201ENST00000321949 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
CRTC1-201ENST00000321949 XP32Q5T750 250 aa9.07□□□□□ -0.96
CRTC1-201ENST00000321949 ROMO1P60602 79 aa9.06□□□□□ -0.96
CRTC1-201ENST00000321949 S4R3F8 94 aa9.06□□□□□ -0.96
CRTC1-201ENST00000321949 P0C880 135 aa9.02□□□□□ -0.96
CRTC1-201ENST00000321949 KIAA1109Q2LD37 5005 aa9.01□□□□□ -0.97
CRTC1-201ENST00000321949 LPAP08519 4548 aa8.99□□□□□ -0.97
CRTC1-201ENST00000321949 MT1HL1P0DM35 61 aa8.96□□□□□ -0.98
CRTC1-201ENST00000321949 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
CRTC1-201ENST00000321949 TPRXLQ17RH7 258 aa8.91□□□□□ -0.98
CRTC1-201ENST00000321949 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
CRTC1-201ENST00000321949 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
CRTC1-201ENST00000321949 LRP2P98164 4655 aa8.85□□□□□ -0.99
CRTC1-201ENST00000321949 SPINT4Q6UDR6 99 aa8.8□□□□□ -1
CRTC1-201ENST00000321949 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
CRTC1-201ENST00000321949 KRTAP12-1P59990 96 aa8.75□□□□□ -1.01
CRTC1-201ENST00000321949 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
CRTC1-201ENST00000321949 M0QZ58 72 aa8.6□□□□□ -1.03
CRTC1-201ENST00000321949 J3QL48 77 aa8.52□□□□□ -1.04
CRTC1-201ENST00000321949 BIRC6Q9NR09 4857 aa8.52□□□□□ -1.04
CRTC1-201ENST00000321949 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
CRTC1-201ENST00000321949 HERC2O95714 4834 aa8.5□□□□□ -1.05
CRTC1-201ENST00000321949 R4GN34 69 aa8.45□□□□□ -1.06
CRTC1-201ENST00000321949 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
CRTC1-201ENST00000321949 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
CRTC1-201ENST00000321949 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
CRTC1-201ENST00000321949 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
CRTC1-201ENST00000321949 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
CRTC1-201ENST00000321949 MUC2Q02817 5179 aa8.21□□□□□ -1.1
CRTC1-201ENST00000321949 KRTAP19-2Q3LHN2 52 aa8.09□□□□□ -1.11
CRTC1-201ENST00000321949 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
CRTC1-201ENST00000321949 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
CRTC1-201ENST00000321949 CAMK2N1Q7Z7J9 78 aa8.05□□□□□ -1.12
CRTC1-201ENST00000321949 HERC1Q15751 4861 aa8□□□□□ -1.13
CRTC1-201ENST00000321949 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
CRTC1-201ENST00000321949 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.14
CRTC1-201ENST00000321949 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
CRTC1-201ENST00000321949 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
CRTC1-201ENST00000321949 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
CRTC1-201ENST00000321949 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
CRTC1-201ENST00000321949 TNP1P09430 55 aa7.72□□□□□ -1.17
CRTC1-201ENST00000321949 LCE2CQ5TA81 110 aa7.69□□□□□ -1.18
CRTC1-201ENST00000321949 RNF213Q63HN8 5207 aa7.56□□□□□ -1.2
CRTC1-201ENST00000321949 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
CRTC1-201ENST00000321949 MT1HP80294 61 aa7.52□□□□□ -1.21
CRTC1-201ENST00000321949 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
CRTC1-201ENST00000321949 KRTAP19-1Q8IUB9 90 aa7.49□□□□□ -1.21
CRTC1-201ENST00000321949 M0R2T5 61 aa7.48□□□□□ -1.21
CRTC1-201ENST00000321949 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
CRTC1-201ENST00000321949 SPRR5A0A1B0GTR4 108 aa7.43□□□□□ -1.22
CRTC1-201ENST00000321949 LCE3AQ5TA76 89 aa7.35□□□□□ -1.23
CRTC1-201ENST00000321949 MT1FP04733 61 aa7.31□□□□□ -1.24
CRTC1-201ENST00000321949 MT2AP02795 61 aa7.3□□□□□ -1.24
CRTC1-201ENST00000321949 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
CRTC1-201ENST00000321949 KRTAP9-8Q9BYQ0 159 aa7.29□□□□□ -1.24
CRTC1-201ENST00000321949 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
CRTC1-201ENST00000321949 KRTAP10-5P60370 271 aa7.09□□□□□ -1.27
CRTC1-201ENST00000321949 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
CRTC1-201ENST00000321949 MT1BP07438 61 aa7.07□□□□□ -1.28
CRTC1-201ENST00000321949 MT1XP80297 61 aa7.07□□□□□ -1.28
CRTC1-201ENST00000321949 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
CRTC1-201ENST00000321949 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
CRTC1-201ENST00000321949 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
CRTC1-201ENST00000321949 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.29
CRTC1-201ENST00000321949 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
CRTC1-201ENST00000321949 USH2AO75445 5202 aa6.77□□□□□ -1.33
CRTC1-201ENST00000321949 LCE2BO14633 110 aa6.76□□□□□ -1.33
CRTC1-201ENST00000321949 KMT2DO14686 5537 aa6.73□□□□□ -1.33
CRTC1-201ENST00000321949 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
CRTC1-201ENST00000321949 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
CRTC1-201ENST00000321949 INE1O15225 51 aa6.62□□□□□ -1.35
CRTC1-201ENST00000321949 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
CRTC1-201ENST00000321949 KRTAP4-8A0A0G2JLE6 195 aa6.52□□□□□ -1.37
CRTC1-201ENST00000321949 KRTAP4-8Q9BYQ9 185 aa6.52□□□□□ -1.37
CRTC1-201ENST00000321949 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
CRTC1-201ENST00000321949 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
CRTC1-201ENST00000321949 KRTAP19-7Q3SYF9 63 aa6.3□□□□□ -1.4
CRTC1-201ENST00000321949 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
CRTC1-201ENST00000321949 KRTAP19-6Q3LI70 58 aa6.25□□□□□ -1.41
CRTC1-201ENST00000321949 LCE2DQ5TA82 110 aaPredicted RBP6.19□□□□□ -1.42
CRTC1-201ENST00000321949 KRTAP2-3P0C7H8 128 aa6.14□□□□□ -1.43
CRTC1-201ENST00000321949 KRTAP2-4Q9BYR9 128 aa6.14□□□□□ -1.43
CRTC1-201ENST00000321949 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
CRTC1-201ENST00000321949 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
CRTC1-201ENST00000321949 MT1LQ93083 61 aa6.11□□□□□ -1.43
CRTC1-201ENST00000321949 MT1EP04732 61 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms