RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 H7BZZ5 65 aa10.22□□□□□ -0.77
YBX1-201ENST00000321358 KRTAP10-6P60371 365 aaPredicted RBP10.21□□□□□ -0.78
YBX1-201ENST00000321358 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
YBX1-201ENST00000321358 CYSTM1Q9H1C7 97 aa10.2□□□□□ -0.78
YBX1-201ENST00000321358 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.78
YBX1-201ENST00000321358 KRTAP3-3Q9BYR6 98 aa10.11□□□□□ -0.79
YBX1-201ENST00000321358 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
YBX1-201ENST00000321358 SPTSSBQ8NFR3 76 aa10.04□□□□□ -0.8
YBX1-201ENST00000321358 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.8
YBX1-201ENST00000321358 KRTAP9-6A0A140TA67 174 aa10.02□□□□□ -0.81
YBX1-201ENST00000321358 ATP5EP56381 51 aaPredicted RBP10□□□□□ -0.81
YBX1-201ENST00000321358 PCP4P48539 62 aa9.97□□□□□ -0.81
YBX1-201ENST00000321358 TMEM258P61165 79 aa9.97□□□□□ -0.81
YBX1-201ENST00000321358 COA5Q86WW8 74 aa9.97□□□□□ -0.81
YBX1-201ENST00000321358 FSIP2Q5CZC0 6907 aa9.97□□□□□ -0.81
YBX1-201ENST00000321358 MT2AP02795 61 aa9.96□□□□□ -0.82
YBX1-201ENST00000321358 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
YBX1-201ENST00000321358 KRTAP3-2Q9BYR7 98 aa9.95□□□□□ -0.82
YBX1-201ENST00000321358 H0YAA0 97 aa9.87□□□□□ -0.83
YBX1-201ENST00000321358 MT1FP04733 61 aa9.87□□□□□ -0.83
YBX1-201ENST00000321358 CRCT1Q9UGL9 99 aa9.82□□□□□ -0.84
YBX1-201ENST00000321358 ADM2Q7Z4H4 148 aa9.81□□□□□ -0.84
YBX1-201ENST00000321358 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
YBX1-201ENST00000321358 CRIPTQ9P021 101 aa9.68□□□□□ -0.86
YBX1-201ENST00000321358 SEC61GP60059 68 aa9.66□□□□□ -0.86
YBX1-201ENST00000321358 SERP1Q9Y6X1 66 aa9.66□□□□□ -0.86
YBX1-201ENST00000321358 P0C880 135 aa9.62□□□□□ -0.87
YBX1-201ENST00000321358 R4GN34 69 aa9.55□□□□□ -0.88
YBX1-201ENST00000321358 SPRR2GQ9BYE4 73 aa9.52□□□□□ -0.88
YBX1-201ENST00000321358 KRTAP19-1Q8IUB9 90 aa9.51□□□□□ -0.89
YBX1-201ENST00000321358 USH2AO75445 5202 aa9.51□□□□□ -0.89
YBX1-201ENST00000321358 A0A1B0GU69 56 aa9.5□□□□□ -0.89
YBX1-201ENST00000321358 LCE2BO14633 110 aa9.49□□□□□ -0.89
YBX1-201ENST00000321358 M0QZ58 72 aa9.47□□□□□ -0.89
YBX1-201ENST00000321358 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
YBX1-201ENST00000321358 SSPOA2VEC9 5147 aa9.44□□□□□ -0.9
YBX1-201ENST00000321358 LINC01558Q9Y6Z2 57 aa9.41□□□□□ -0.9
YBX1-201ENST00000321358 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
YBX1-201ENST00000321358 Q5VV11 94 aa9.36□□□□□ -0.91
YBX1-201ENST00000321358 A0A1B0GU33 70 aa9.36□□□□□ -0.91
YBX1-201ENST00000321358 V9GYY9 64 aa9.35□□□□□ -0.91
YBX1-201ENST00000321358 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
YBX1-201ENST00000321358 KRTAP19-8Q3LI54 63 aa9.33□□□□□ -0.92
YBX1-201ENST00000321358 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
YBX1-201ENST00000321358 Q1T7F1 81 aa9.26□□□□□ -0.93
YBX1-201ENST00000321358 MT1BP07438 61 aa9.22□□□□□ -0.93
YBX1-201ENST00000321358 KRTAP13-4Q3LI77 160 aa9.21□□□□□ -0.93
YBX1-201ENST00000321358 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
YBX1-201ENST00000321358 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
YBX1-201ENST00000321358 FCGBPQ9Y6R7 5405 aaPredicted RBP9.17□□□□□ -0.94
YBX1-201ENST00000321358 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.15□□□□□ -0.94
YBX1-201ENST00000321358 PSPHP1O15172 72 aa9.14□□□□□ -0.95
YBX1-201ENST00000321358 A6NN06 94 aa9.11□□□□□ -0.95
YBX1-201ENST00000321358 UQCR11O14957 56 aa9.11□□□□□ -0.95
YBX1-201ENST00000321358 A0A0D9SG42 100 aa9.1□□□□□ -0.95
YBX1-201ENST00000321358 KRTAP19-6Q3LI70 58 aa9.07□□□□□ -0.96
YBX1-201ENST00000321358 KRTAP9-7A8MTY7 169 aa9.01□□□□□ -0.97
YBX1-201ENST00000321358 A8MU10 97 aa8.96□□□□□ -0.97
YBX1-201ENST00000321358 MIR22HGQ0VDD5 57 aa8.95□□□□□ -0.98
YBX1-201ENST00000321358 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
YBX1-201ENST00000321358 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
YBX1-201ENST00000321358 MACF1Q9UPN3 7388 aaKnown RBP8.94□□□□□ -0.98
YBX1-201ENST00000321358 A6NED7 52 aa8.91□□□□□ -0.98
YBX1-201ENST00000321358 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
YBX1-201ENST00000321358 CAMK2N1Q7Z7J9 78 aa8.9□□□□□ -0.98
YBX1-201ENST00000321358 KRTAP12-1P59990 96 aa8.88□□□□□ -0.99
YBX1-201ENST00000321358 SYNE2Q8WXH0 6885 aaKnown RBP8.87□□□□□ -0.99
YBX1-201ENST00000321358 KRTAP12-2P59991 146 aa8.82□□□□□ -1
YBX1-201ENST00000321358 MT1XP80297 61 aa8.82□□□□□ -1
YBX1-201ENST00000321358 K7ERS5 55 aa8.75□□□□□ -1.01
YBX1-201ENST00000321358 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
YBX1-201ENST00000321358 KRTAP6-3Q3LI67 103 aa8.56□□□□□ -1.04
YBX1-201ENST00000321358 KRTAP10-7P60409 375 aaPredicted RBP8.44□□□□□ -1.06
YBX1-201ENST00000321358 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
YBX1-201ENST00000321358 BRK1Q8WUW1 75 aa8.39□□□□□ -1.07
YBX1-201ENST00000321358 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
YBX1-201ENST00000321358 TNP1P09430 55 aa8.36□□□□□ -1.07
YBX1-201ENST00000321358 NEBP20929 6669 aa8.33□□□□□ -1.08
YBX1-201ENST00000321358 MUC12Q9UKN1 5478 aa8.29□□□□□ -1.08
YBX1-201ENST00000321358 KRTAP8-1Q8IUC2 63 aa8.24□□□□□ -1.09
YBX1-201ENST00000321358 KRTAP4-8A0A0G2JLE6 195 aa8.23□□□□□ -1.09
YBX1-201ENST00000321358 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
YBX1-201ENST00000321358 KMT2DO14686 5537 aa8.22□□□□□ -1.09
YBX1-201ENST00000321358 KRTAP25-1Q3LHN0 102 aa8.2□□□□□ -1.1
YBX1-201ENST00000321358 KRTAP5-9P26371 169 aa8.19□□□□□ -1.1
YBX1-201ENST00000321358 ROMO1P60602 79 aa8.19□□□□□ -1.1
YBX1-201ENST00000321358 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
YBX1-201ENST00000321358 MDN1Q9NU22 5596 aa8.04□□□□□ -1.12
YBX1-201ENST00000321358 LCE3AQ5TA76 89 aa8.02□□□□□ -1.13
YBX1-201ENST00000321358 PMAIP1Q13794 54 aa7.95□□□□□ -1.14
YBX1-201ENST00000321358 PRO0628Q9UI54 55 aa7.93□□□□□ -1.14
YBX1-201ENST00000321358 KRTAP23-1A1A580 65 aa7.91□□□□□ -1.14
YBX1-201ENST00000321358 KRTAP20-1Q3LI63 56 aa7.91□□□□□ -1.14
YBX1-201ENST00000321358 KRTAP19-5Q3LI72 72 aa7.88□□□□□ -1.15
YBX1-201ENST00000321358 KRTAP19-7Q3SYF9 63 aa7.86□□□□□ -1.15
YBX1-201ENST00000321358 SPRR2EP22531 72 aa7.83□□□□□ -1.16
YBX1-201ENST00000321358 SPRR2BP35325 72 aa7.83□□□□□ -1.16
YBX1-201ENST00000321358 SPRR2AP35326 72 aa7.83□□□□□ -1.16
YBX1-201ENST00000321358 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
YBX1-201ENST00000321358 MT1EP04732 61 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms