RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 KRTAP3-1Q9BYR8 98 aa10.43□□□□□ -0.74
AP3S1-201ENST00000316788 RBM12B-AS1Q9P1G2 102 aa10.38□□□□□ -0.75
AP3S1-201ENST00000316788 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
AP3S1-201ENST00000316788 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
AP3S1-201ENST00000316788 MT1HL1P0DM35 61 aa10.3□□□□□ -0.76
AP3S1-201ENST00000316788 HERC1Q15751 4861 aa10.22□□□□□ -0.77
AP3S1-201ENST00000316788 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
AP3S1-201ENST00000316788 A0A1B0GU33 70 aa10.21□□□□□ -0.78
AP3S1-201ENST00000316788 H0YAA0 97 aa10.2□□□□□ -0.78
AP3S1-201ENST00000316788 H1FX-AS1Q4G0G2 97 aa10.2□□□□□ -0.78
AP3S1-201ENST00000316788 J3QL48 77 aa10.19□□□□□ -0.78
AP3S1-201ENST00000316788 DMBT1Q9UGM3 2413 aaPredicted RBP10.17□□□□□ -0.78
AP3S1-201ENST00000316788 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
AP3S1-201ENST00000316788 XP32Q5T750 250 aa10.11□□□□□ -0.79
AP3S1-201ENST00000316788 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
AP3S1-201ENST00000316788 KRTAP3-3Q9BYR6 98 aa10.01□□□□□ -0.81
AP3S1-201ENST00000316788 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.81
AP3S1-201ENST00000316788 S4R3F8 94 aa9.95□□□□□ -0.82
AP3S1-201ENST00000316788 KRTAP10-6P60371 365 aaPredicted RBP9.93□□□□□ -0.82
AP3S1-201ENST00000316788 K7ERS5 55 aa9.92□□□□□ -0.82
AP3S1-201ENST00000316788 LINC01554Q52M75 96 aa9.9□□□□□ -0.82
AP3S1-201ENST00000316788 LPAP08519 4548 aa9.9□□□□□ -0.82
AP3S1-201ENST00000316788 CSAG1Q6PB30 78 aa9.9□□□□□ -0.83
AP3S1-201ENST00000316788 KRTAP3-2Q9BYR7 98 aa9.87□□□□□ -0.83
AP3S1-201ENST00000316788 TPRXLQ17RH7 258 aa9.85□□□□□ -0.83
AP3S1-201ENST00000316788 LRP2P98164 4655 aa9.8□□□□□ -0.84
AP3S1-201ENST00000316788 KRTAP25-1Q3LHN0 102 aa9.75□□□□□ -0.85
AP3S1-201ENST00000316788 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
AP3S1-201ENST00000316788 P0C880 135 aa9.66□□□□□ -0.86
AP3S1-201ENST00000316788 ROMO1P60602 79 aa9.66□□□□□ -0.86
AP3S1-201ENST00000316788 UBR4Q5T4S7 5183 aa9.6□□□□□ -0.87
AP3S1-201ENST00000316788 A0A0D9SG42 100 aa9.58□□□□□ -0.88
AP3S1-201ENST00000316788 M0QZ58 72 aa9.53□□□□□ -0.88
AP3S1-201ENST00000316788 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
AP3S1-201ENST00000316788 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.89
AP3S1-201ENST00000316788 KRTAP12-1P59990 96 aa9.43□□□□□ -0.9
AP3S1-201ENST00000316788 KRTAP12-2P59991 146 aa9.42□□□□□ -0.9
AP3S1-201ENST00000316788 MUC2Q02817 5179 aa9.4□□□□□ -0.9
AP3S1-201ENST00000316788 RNF213Q63HN8 5207 aa9.39□□□□□ -0.91
AP3S1-201ENST00000316788 CRIPTQ9P021 101 aa9.36□□□□□ -0.91
AP3S1-201ENST00000316788 SPINT4Q6UDR6 99 aa9.31□□□□□ -0.92
AP3S1-201ENST00000316788 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.93
AP3S1-201ENST00000316788 R4GN34 69 aa9.18□□□□□ -0.94
AP3S1-201ENST00000316788 KRTAP19-2Q3LHN2 52 aa9.14□□□□□ -0.95
AP3S1-201ENST00000316788 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
AP3S1-201ENST00000316788 FAT4Q6V0I7 4981 aa9.06□□□□□ -0.96
AP3S1-201ENST00000316788 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
AP3S1-201ENST00000316788 LCE2CQ5TA81 110 aa8.88□□□□□ -0.99
AP3S1-201ENST00000316788 KRTAP15-1Q3LI76 137 aa8.86□□□□□ -0.99
AP3S1-201ENST00000316788 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
AP3S1-201ENST00000316788 H3BS24 57 aa8.8□□□□□ -1
AP3S1-201ENST00000316788 MT1HP80294 61 aa8.71□□□□□ -1.02
AP3S1-201ENST00000316788 CAMK2N1Q7Z7J9 78 aa8.7□□□□□ -1.02
AP3S1-201ENST00000316788 LCE2AQ5TA79 106 aaPredicted RBP8.69□□□□□ -1.02
AP3S1-201ENST00000316788 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
AP3S1-201ENST00000316788 M0R2T5 61 aa8.54□□□□□ -1.04
AP3S1-201ENST00000316788 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
AP3S1-201ENST00000316788 PLAC4Q8WY50 150 aa8.5□□□□□ -1.05
AP3S1-201ENST00000316788 NDUFAF8A1L188 74 aa8.49□□□□□ -1.05
AP3S1-201ENST00000316788 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
AP3S1-201ENST00000316788 TNP1P09430 55 aa8.44□□□□□ -1.06
AP3S1-201ENST00000316788 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
AP3S1-201ENST00000316788 KRTAP9-8Q9BYQ0 159 aa8.33□□□□□ -1.08
AP3S1-201ENST00000316788 MT2AP02795 61 aa8.26□□□□□ -1.09
AP3S1-201ENST00000316788 MT1FP04733 61 aa8.22□□□□□ -1.09
AP3S1-201ENST00000316788 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
AP3S1-201ENST00000316788 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
AP3S1-201ENST00000316788 LUZP6Q538Z0 58 aa8.11□□□□□ -1.11
AP3S1-201ENST00000316788 SPRR5A0A1B0GTR4 108 aa8.06□□□□□ -1.12
AP3S1-201ENST00000316788 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
AP3S1-201ENST00000316788 LCE2DQ5TA82 110 aaPredicted RBP8.01□□□□□ -1.13
AP3S1-201ENST00000316788 KRTAP9-2Q9BYQ4 174 aa8.01□□□□□ -1.13
AP3S1-201ENST00000316788 MT1BP07438 61 aa7.94□□□□□ -1.14
AP3S1-201ENST00000316788 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
AP3S1-201ENST00000316788 FSIP2Q5CZC0 6907 aa7.93□□□□□ -1.14
AP3S1-201ENST00000316788 LCE2BO14633 110 aa7.92□□□□□ -1.14
AP3S1-201ENST00000316788 USH2AO75445 5202 aa7.92□□□□□ -1.14
AP3S1-201ENST00000316788 KRTAP8-1Q8IUC2 63 aa7.86□□□□□ -1.15
AP3S1-201ENST00000316788 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
AP3S1-201ENST00000316788 MT1XP80297 61 aa7.85□□□□□ -1.15
AP3S1-201ENST00000316788 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
AP3S1-201ENST00000316788 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
AP3S1-201ENST00000316788 A0A0A0MQY5 61 aa7.67□□□□□ -1.18
AP3S1-201ENST00000316788 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
AP3S1-201ENST00000316788 CRCT1Q9UGL9 99 aa7.64□□□□□ -1.19
AP3S1-201ENST00000316788 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
AP3S1-201ENST00000316788 KRTAP10-7P60409 375 aaPredicted RBP7.56□□□□□ -1.2
AP3S1-201ENST00000316788 KRTAP9-6A0A140TA67 174 aa7.55□□□□□ -1.2
AP3S1-201ENST00000316788 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
AP3S1-201ENST00000316788 FCGBPQ9Y6R7 5405 aaPredicted RBP7.48□□□□□ -1.21
AP3S1-201ENST00000316788 KRTAP19-5Q3LI72 72 aa7.26□□□□□ -1.25
AP3S1-201ENST00000316788 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
AP3S1-201ENST00000316788 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
AP3S1-201ENST00000316788 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
AP3S1-201ENST00000316788 KRTAP19-4Q3LI73 84 aa7.1□□□□□ -1.27
AP3S1-201ENST00000316788 KMT2DO14686 5537 aa7.09□□□□□ -1.27
AP3S1-201ENST00000316788 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
AP3S1-201ENST00000316788 INE1O15225 51 aa7.06□□□□□ -1.28
AP3S1-201ENST00000316788 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
AP3S1-201ENST00000316788 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms