RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
SOX30-202ENST00000311371 LUZP6Q538Z0 58 aa8.47□□□□□ -1.05
SOX30-202ENST00000311371 S4R3F8 94 aa8.42□□□□□ -1.06
SOX30-202ENST00000311371 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
SOX30-202ENST00000311371 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
SOX30-202ENST00000311371 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
SOX30-202ENST00000311371 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
SOX30-202ENST00000311371 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
SOX30-202ENST00000311371 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
SOX30-202ENST00000311371 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
SOX30-202ENST00000311371 XP32Q5T750 250 aa8.23□□□□□ -1.09
SOX30-202ENST00000311371 VPS13BQ7Z7G8 4022 aa8.22□□□□□ -1.09
SOX30-202ENST00000311371 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.09
SOX30-202ENST00000311371 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
SOX30-202ENST00000311371 KRTAP12-1P59990 96 aa8.21□□□□□ -1.1
SOX30-202ENST00000311371 SMR3BP02814 79 aaPredicted RBP8.18□□□□□ -1.1
SOX30-202ENST00000311371 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.11
SOX30-202ENST00000311371 FAT1Q14517 4588 aa8.12□□□□□ -1.11
SOX30-202ENST00000311371 PLAC4Q8WY50 150 aa8.11□□□□□ -1.11
SOX30-202ENST00000311371 KIAA1109Q2LD37 5005 aa8.09□□□□□ -1.11
SOX30-202ENST00000311371 HSPG2P98160 4391 aa8.08□□□□□ -1.12
SOX30-202ENST00000311371 RYR1P21817 5038 aa8.04□□□□□ -1.12
SOX30-202ENST00000311371 KRTAP17-1Q9BYP8 105 aa8.04□□□□□ -1.12
SOX30-202ENST00000311371 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.12
SOX30-202ENST00000311371 KRTAP10-8P60410 259 aa8□□□□□ -1.13
SOX30-202ENST00000311371 Q5VSD8 79 aa7.96□□□□□ -1.13
SOX30-202ENST00000311371 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
SOX30-202ENST00000311371 M0QZ58 72 aa7.86□□□□□ -1.15
SOX30-202ENST00000311371 BIRC6Q9NR09 4857 aa7.85□□□□□ -1.15
SOX30-202ENST00000311371 LRP1Q07954 4544 aaKnown RBP7.85□□□□□ -1.15
SOX30-202ENST00000311371 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
SOX30-202ENST00000311371 MYCBP2O75592 4640 aa7.81□□□□□ -1.16
SOX30-202ENST00000311371 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
SOX30-202ENST00000311371 HERC2O95714 4834 aa7.74□□□□□ -1.17
SOX30-202ENST00000311371 FAT3Q8TDW7 4589 aa7.73□□□□□ -1.17
SOX30-202ENST00000311371 ABCA13Q86UQ4 5058 aa7.73□□□□□ -1.17
SOX30-202ENST00000311371 TNXBP22105 4242 aa7.7□□□□□ -1.18
SOX30-202ENST00000311371 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
SOX30-202ENST00000311371 R4GN34 69 aa7.64□□□□□ -1.19
SOX30-202ENST00000311371 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
SOX30-202ENST00000311371 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
SOX30-202ENST00000311371 J3QL48 77 aa7.47□□□□□ -1.21
SOX30-202ENST00000311371 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
SOX30-202ENST00000311371 LPAP08519 4548 aa7.44□□□□□ -1.22
SOX30-202ENST00000311371 CAMK2N1Q7Z7J9 78 aa7.39□□□□□ -1.23
SOX30-202ENST00000311371 HERC1Q15751 4861 aa7.35□□□□□ -1.23
SOX30-202ENST00000311371 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
SOX30-202ENST00000311371 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
SOX30-202ENST00000311371 LRP2P98164 4655 aa7.22□□□□□ -1.25
SOX30-202ENST00000311371 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.27
SOX30-202ENST00000311371 TNP1P09430 55 aa7.11□□□□□ -1.27
SOX30-202ENST00000311371 INE1O15225 51 aa7.02□□□□□ -1.29
SOX30-202ENST00000311371 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
SOX30-202ENST00000311371 MUC2Q02817 5179 aa6.93□□□□□ -1.3
SOX30-202ENST00000311371 KRTAP4-1Q9BYQ7 146 aa6.92□□□□□ -1.3
SOX30-202ENST00000311371 UBR4Q5T4S7 5183 aa6.91□□□□□ -1.3
SOX30-202ENST00000311371 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
SOX30-202ENST00000311371 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
SOX30-202ENST00000311371 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
SOX30-202ENST00000311371 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
SOX30-202ENST00000311371 FAT4Q6V0I7 4981 aa6.63□□□□□ -1.35
SOX30-202ENST00000311371 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
SOX30-202ENST00000311371 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
SOX30-202ENST00000311371 MT1HP80294 61 aa6.45□□□□□ -1.38
SOX30-202ENST00000311371 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
SOX30-202ENST00000311371 M0R2T5 61 aa6.37□□□□□ -1.39
SOX30-202ENST00000311371 KRTAP10-12P60413 245 aa6.32□□□□□ -1.4
SOX30-202ENST00000311371 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
SOX30-202ENST00000311371 KRTAP19-1Q8IUB9 90 aa6.28□□□□□ -1.4
SOX30-202ENST00000311371 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
SOX30-202ENST00000311371 SPRR2GQ9BYE4 73 aa6.27□□□□□ -1.41
SOX30-202ENST00000311371 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
SOX30-202ENST00000311371 KRTAP9-8Q9BYQ0 159 aa6.19□□□□□ -1.42
SOX30-202ENST00000311371 MT2AP02795 61 aa6.16□□□□□ -1.42
SOX30-202ENST00000311371 MT1FP04733 61 aa6.14□□□□□ -1.43
SOX30-202ENST00000311371 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
SOX30-202ENST00000311371 MT1XP80297 61 aa5.98□□□□□ -1.45
SOX30-202ENST00000311371 KRTAP10-7P60409 375 aaPredicted RBP5.97□□□□□ -1.45
SOX30-202ENST00000311371 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
SOX30-202ENST00000311371 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
SOX30-202ENST00000311371 KRTAP9-6A8MVA2 160 aa5.88□□□□□ -1.47
SOX30-202ENST00000311371 LCE2BO14633 110 aa5.85□□□□□ -1.47
SOX30-202ENST00000311371 MT1BP07438 61 aa5.83□□□□□ -1.48
SOX30-202ENST00000311371 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
SOX30-202ENST00000311371 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
SOX30-202ENST00000311371 KRTAP2-3P0C7H8 128 aa5.81□□□□□ -1.48
SOX30-202ENST00000311371 KRTAP2-4Q9BYR9 128 aa5.81□□□□□ -1.48
SOX30-202ENST00000311371 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
SOX30-202ENST00000311371 USH2AO75445 5202 aa5.78□□□□□ -1.48
SOX30-202ENST00000311371 FSIP2Q5CZC0 6907 aa5.74□□□□□ -1.49
SOX30-202ENST00000311371 LCE2DQ5TA82 110 aaPredicted RBP5.69□□□□□ -1.5
SOX30-202ENST00000311371 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
SOX30-202ENST00000311371 KMT2DO14686 5537 aa5.62□□□□□ -1.51
SOX30-202ENST00000311371 KRTAP9-2Q9BYQ4 174 aa5.61□□□□□ -1.51
SOX30-202ENST00000311371 SSPOA2VEC9 5147 aa5.6□□□□□ -1.51
SOX30-202ENST00000311371 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
SOX30-202ENST00000311371 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
SOX30-202ENST00000311371 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
SOX30-202ENST00000311371 KRTAP12-4P60329 112 aa5.45□□□□□ -1.54
SOX30-202ENST00000311371 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms