RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 SEC61GP60059 68 aa11.88□□□□□ -0.51
SNCB-201ENST00000310112 LCA10Q71F78 164 aa11.81□□□□□ -0.52
SNCB-201ENST00000310112 A6NED7 52 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 KRTAP4-1Q9BYQ7 146 aa11.74□□□□□ -0.53
SNCB-201ENST00000310112 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
SNCB-201ENST00000310112 MUC17Q685J3 4493 aa11.73□□□□□ -0.53
SNCB-201ENST00000310112 PRO0628Q9UI54 55 aa11.69□□□□□ -0.54
SNCB-201ENST00000310112 UQCR11O14957 56 aa11.66□□□□□ -0.54
SNCB-201ENST00000310112 CDC42SE1Q9NRR8 79 aa11.65□□□□□ -0.55
SNCB-201ENST00000310112 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
SNCB-201ENST00000310112 SPATA8Q6RVD6 105 aa11.54□□□□□ -0.56
SNCB-201ENST00000310112 KRTAP19-2Q3LHN2 52 aa11.53□□□□□ -0.56
SNCB-201ENST00000310112 A0A1B0GU33 70 aa11.52□□□□□ -0.57
SNCB-201ENST00000310112 HMCN2Q8NDA2 5059 aa11.52□□□□□ -0.57
SNCB-201ENST00000310112 MIR22HGQ0VDD5 57 aa11.51□□□□□ -0.57
SNCB-201ENST00000310112 HERC1Q15751 4861 aa11.5□□□□□ -0.57
SNCB-201ENST00000310112 H0YAA0 97 aa11.46□□□□□ -0.57
SNCB-201ENST00000310112 KRTAP10-6P60371 365 aaPredicted RBP11.42□□□□□ -0.58
SNCB-201ENST00000310112 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
SNCB-201ENST00000310112 A8MU10 97 aa11.39□□□□□ -0.59
SNCB-201ENST00000310112 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
SNCB-201ENST00000310112 P0C880 135 aa11.27□□□□□ -0.61
SNCB-201ENST00000310112 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
SNCB-201ENST00000310112 PMAIP1Q13794 54 aa11.17□□□□□ -0.62
SNCB-201ENST00000310112 M0QZ58 72 aa11.16□□□□□ -0.62
SNCB-201ENST00000310112 LCE2CQ5TA81 110 aa11.16□□□□□ -0.62
SNCB-201ENST00000310112 FLGP20930 4061 aaPredicted RBP11.11□□□□□ -0.63
SNCB-201ENST00000310112 KRTAP13-4Q3LI77 160 aa11.08□□□□□ -0.64
SNCB-201ENST00000310112 A6NN06 94 aa11.07□□□□□ -0.64
SNCB-201ENST00000310112 K7ERS5 55 aa11.04□□□□□ -0.64
SNCB-201ENST00000310112 R4GN34 69 aa10.97□□□□□ -0.65
SNCB-201ENST00000310112 MUC2Q02817 5179 aa10.95□□□□□ -0.66
SNCB-201ENST00000310112 MT1HP80294 61 aa10.93□□□□□ -0.66
SNCB-201ENST00000310112 A0A0D9SG42 100 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 CRIPTQ9P021 101 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 RNF213Q63HN8 5207 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 M0R2T5 61 aa10.87□□□□□ -0.67
SNCB-201ENST00000310112 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
SNCB-201ENST00000310112 LORP23490 312 aaPredicted RBP10.8□□□□□ -0.68
SNCB-201ENST00000310112 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
SNCB-201ENST00000310112 KRTAP12-1P59990 96 aa10.75□□□□□ -0.69
SNCB-201ENST00000310112 KRTAP12-2P59991 146 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 LINC01554Q52M75 96 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 SPINT4Q6UDR6 99 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
SNCB-201ENST00000310112 MT2AP02795 61 aa10.56□□□□□ -0.72
SNCB-201ENST00000310112 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
SNCB-201ENST00000310112 ROMO1P60602 79 aa10.54□□□□□ -0.72
SNCB-201ENST00000310112 SPRR2GQ9BYE4 73 aa10.53□□□□□ -0.72
SNCB-201ENST00000310112 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
SNCB-201ENST00000310112 MT1FP04733 61 aa10.48□□□□□ -0.73
SNCB-201ENST00000310112 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
SNCB-201ENST00000310112 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
SNCB-201ENST00000310112 PRAC1Q96KF2 57 aa10.33□□□□□ -0.76
SNCB-201ENST00000310112 CAMK2N1Q7Z7J9 78 aa10.3□□□□□ -0.76
SNCB-201ENST00000310112 PLAC4Q8WY50 150 aa10.26□□□□□ -0.77
SNCB-201ENST00000310112 KRTAP19-8Q3LI54 63 aa10.23□□□□□ -0.77
SNCB-201ENST00000310112 KRTAP9-3Q9BYQ3 159 aa10.19□□□□□ -0.78
SNCB-201ENST00000310112 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
SNCB-201ENST00000310112 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
SNCB-201ENST00000310112 MT1BP07438 61 aa10□□□□□ -0.81
SNCB-201ENST00000310112 TNP1P09430 55 aa9.88□□□□□ -0.83
SNCB-201ENST00000310112 LCE2BO14633 110 aa9.81□□□□□ -0.84
SNCB-201ENST00000310112 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
SNCB-201ENST00000310112 KRTAP23-1A1A580 65 aa9.75□□□□□ -0.85
SNCB-201ENST00000310112 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
SNCB-201ENST00000310112 MT1XP80297 61 aa9.72□□□□□ -0.85
SNCB-201ENST00000310112 KRTAP10-5P60370 271 aa9.71□□□□□ -0.86
SNCB-201ENST00000310112 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
SNCB-201ENST00000310112 KRTAP10-12P60413 245 aa9.34□□□□□ -0.91
SNCB-201ENST00000310112 LCE3AQ5TA76 89 aa9.32□□□□□ -0.92
SNCB-201ENST00000310112 KRTAP10-7P60409 375 aaPredicted RBP9.29□□□□□ -0.92
SNCB-201ENST00000310112 USH2AO75445 5202 aa9.28□□□□□ -0.92
SNCB-201ENST00000310112 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
SNCB-201ENST00000310112 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
SNCB-201ENST00000310112 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
SNCB-201ENST00000310112 SSPOA2VEC9 5147 aa9.02□□□□□ -0.97
SNCB-201ENST00000310112 KRTAP12-3P60328 96 aa8.99□□□□□ -0.97
SNCB-201ENST00000310112 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
SNCB-201ENST00000310112 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
SNCB-201ENST00000310112 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
SNCB-201ENST00000310112 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
SNCB-201ENST00000310112 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
SNCB-201ENST00000310112 SPRR5A0A1B0GTR4 108 aa8.69□□□□□ -1.02
SNCB-201ENST00000310112 KRTAP19-7Q3SYF9 63 aa8.66□□□□□ -1.02
SNCB-201ENST00000310112 KRTAP19-4Q3LI73 84 aa8.63□□□□□ -1.03
SNCB-201ENST00000310112 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
SNCB-201ENST00000310112 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
SNCB-201ENST00000310112 LUZP6Q538Z0 58 aa8.55□□□□□ -1.04
SNCB-201ENST00000310112 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.04
SNCB-201ENST00000310112 MT1EP04732 61 aa8.52□□□□□ -1.05
SNCB-201ENST00000310112 KMT2DO14686 5537 aa8.47□□□□□ -1.05
SNCB-201ENST00000310112 LCE3CQ5T5A8 94 aa8.42□□□□□ -1.06
SNCB-201ENST00000310112 MT1LQ93083 61 aa8.38□□□□□ -1.07
SNCB-201ENST00000310112 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
SNCB-201ENST00000310112 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
SNCB-201ENST00000310112 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
SNCB-201ENST00000310112 MT1GP13640 62 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms