RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 SEC61GP60059 68 aa11.88□□□□□ -0.51
SNCB-201ENST00000310112 LCA10Q71F78 164 aa11.81□□□□□ -0.52
SNCB-201ENST00000310112 A6NED7 52 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 BRK1Q8WUW1 75 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 KRTAP3-3Q9BYR6 98 aa11.78□□□□□ -0.52
SNCB-201ENST00000310112 KRTAP4-1Q9BYQ7 146 aa11.74□□□□□ -0.53
SNCB-201ENST00000310112 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
SNCB-201ENST00000310112 MUC17Q685J3 4493 aa11.73□□□□□ -0.53
SNCB-201ENST00000310112 PRO0628Q9UI54 55 aa11.69□□□□□ -0.54
SNCB-201ENST00000310112 UQCR11O14957 56 aa11.66□□□□□ -0.54
SNCB-201ENST00000310112 CDC42SE1Q9NRR8 79 aa11.65□□□□□ -0.55
SNCB-201ENST00000310112 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
SNCB-201ENST00000310112 SPATA8Q6RVD6 105 aa11.54□□□□□ -0.56
SNCB-201ENST00000310112 KRTAP19-2Q3LHN2 52 aa11.53□□□□□ -0.56
SNCB-201ENST00000310112 A0A1B0GU33 70 aa11.52□□□□□ -0.57
SNCB-201ENST00000310112 HMCN2Q8NDA2 5059 aa11.52□□□□□ -0.57
SNCB-201ENST00000310112 MIR22HGQ0VDD5 57 aa11.51□□□□□ -0.57
SNCB-201ENST00000310112 HERC1Q15751 4861 aa11.5□□□□□ -0.57
SNCB-201ENST00000310112 H0YAA0 97 aa11.46□□□□□ -0.57
SNCB-201ENST00000310112 KRTAP10-6P60371 365 aaPredicted RBP11.42□□□□□ -0.58
SNCB-201ENST00000310112 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
SNCB-201ENST00000310112 A8MU10 97 aa11.39□□□□□ -0.59
SNCB-201ENST00000310112 ADM2Q7Z4H4 148 aa11.35□□□□□ -0.59
SNCB-201ENST00000310112 P0C880 135 aa11.27□□□□□ -0.61
SNCB-201ENST00000310112 SVIPQ8NHG7 77 aa11.19□□□□□ -0.62
SNCB-201ENST00000310112 PMAIP1Q13794 54 aa11.17□□□□□ -0.62
SNCB-201ENST00000310112 M0QZ58 72 aa11.16□□□□□ -0.62
SNCB-201ENST00000310112 LCE2CQ5TA81 110 aa11.16□□□□□ -0.62
SNCB-201ENST00000310112 FLGP20930 4061 aaPredicted RBP11.11□□□□□ -0.63
SNCB-201ENST00000310112 KRTAP13-4Q3LI77 160 aa11.08□□□□□ -0.64
SNCB-201ENST00000310112 A6NN06 94 aa11.07□□□□□ -0.64
SNCB-201ENST00000310112 K7ERS5 55 aa11.04□□□□□ -0.64
SNCB-201ENST00000310112 R4GN34 69 aa10.97□□□□□ -0.65
SNCB-201ENST00000310112 MUC2Q02817 5179 aa10.95□□□□□ -0.66
SNCB-201ENST00000310112 MT1HP80294 61 aa10.93□□□□□ -0.66
SNCB-201ENST00000310112 A0A0D9SG42 100 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 CRIPTQ9P021 101 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 RNF213Q63HN8 5207 aa10.91□□□□□ -0.66
SNCB-201ENST00000310112 M0R2T5 61 aa10.87□□□□□ -0.67
SNCB-201ENST00000310112 UBR4Q5T4S7 5183 aa10.83□□□□□ -0.68
SNCB-201ENST00000310112 LORP23490 312 aaPredicted RBP10.8□□□□□ -0.68
SNCB-201ENST00000310112 KTN1-AS1Q86SY8 53 aa10.8□□□□□ -0.68
SNCB-201ENST00000310112 KRTAP12-1P59990 96 aa10.75□□□□□ -0.69
SNCB-201ENST00000310112 KRTAP12-2P59991 146 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 LINC01554Q52M75 96 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 SPINT4Q6UDR6 99 aa10.68□□□□□ -0.7
SNCB-201ENST00000310112 FAT4Q6V0I7 4981 aa10.58□□□□□ -0.72
SNCB-201ENST00000310112 MT2AP02795 61 aa10.56□□□□□ -0.72
SNCB-201ENST00000310112 KRTAP9-8Q9BYQ0 159 aa10.56□□□□□ -0.72
SNCB-201ENST00000310112 ROMO1P60602 79 aa10.54□□□□□ -0.72
SNCB-201ENST00000310112 SPRR2GQ9BYE4 73 aa10.53□□□□□ -0.72
SNCB-201ENST00000310112 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
SNCB-201ENST00000310112 MT1FP04733 61 aa10.48□□□□□ -0.73
SNCB-201ENST00000310112 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
SNCB-201ENST00000310112 LCE2AQ5TA79 106 aaPredicted RBP10.37□□□□□ -0.75
SNCB-201ENST00000310112 PRAC1Q96KF2 57 aa10.33□□□□□ -0.76
SNCB-201ENST00000310112 CAMK2N1Q7Z7J9 78 aa10.3□□□□□ -0.76
SNCB-201ENST00000310112 PLAC4Q8WY50 150 aa10.26□□□□□ -0.77
SNCB-201ENST00000310112 KRTAP19-8Q3LI54 63 aa10.23□□□□□ -0.77
SNCB-201ENST00000310112 KRTAP9-3Q9BYQ3 159 aa10.19□□□□□ -0.78
SNCB-201ENST00000310112 KRTAP25-1Q3LHN0 102 aa10.17□□□□□ -0.78
SNCB-201ENST00000310112 C10orf95Q9H7T3 257 aa10.14□□□□□ -0.79
SNCB-201ENST00000310112 MT1BP07438 61 aa10□□□□□ -0.81
SNCB-201ENST00000310112 TNP1P09430 55 aa9.88□□□□□ -0.83
SNCB-201ENST00000310112 LCE2BO14633 110 aa9.81□□□□□ -0.84
SNCB-201ENST00000310112 PP632Q6XCG6 107 aa9.79□□□□□ -0.84
SNCB-201ENST00000310112 KRTAP23-1A1A580 65 aa9.75□□□□□ -0.85
SNCB-201ENST00000310112 PRO2289Q9P1D8 64 aa9.73□□□□□ -0.85
SNCB-201ENST00000310112 MT1XP80297 61 aa9.72□□□□□ -0.85
SNCB-201ENST00000310112 KRTAP10-5P60370 271 aa9.71□□□□□ -0.86
SNCB-201ENST00000310112 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
SNCB-201ENST00000310112 KRTAP10-12P60413 245 aa9.34□□□□□ -0.91
SNCB-201ENST00000310112 LCE3AQ5TA76 89 aa9.32□□□□□ -0.92
SNCB-201ENST00000310112 KRTAP10-7P60409 375 aaPredicted RBP9.29□□□□□ -0.92
SNCB-201ENST00000310112 USH2AO75445 5202 aa9.28□□□□□ -0.92
SNCB-201ENST00000310112 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
SNCB-201ENST00000310112 KRTAP8-1Q8IUC2 63 aa9.24□□□□□ -0.93
SNCB-201ENST00000310112 KRTAP15-1Q3LI76 137 aa9.02□□□□□ -0.97
SNCB-201ENST00000310112 SSPOA2VEC9 5147 aa9.02□□□□□ -0.97
SNCB-201ENST00000310112 KRTAP12-3P60328 96 aa8.99□□□□□ -0.97
SNCB-201ENST00000310112 KRTAP4-8A0A0G2JLE6 195 aa8.83□□□□□ -1
SNCB-201ENST00000310112 KRTAP4-8Q9BYQ9 185 aa8.83□□□□□ -1
SNCB-201ENST00000310112 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
SNCB-201ENST00000310112 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
SNCB-201ENST00000310112 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
SNCB-201ENST00000310112 SPRR5A0A1B0GTR4 108 aa8.69□□□□□ -1.02
SNCB-201ENST00000310112 KRTAP19-7Q3SYF9 63 aa8.66□□□□□ -1.02
SNCB-201ENST00000310112 KRTAP19-4Q3LI73 84 aa8.63□□□□□ -1.03
SNCB-201ENST00000310112 CRCT1Q9UGL9 99 aa8.57□□□□□ -1.04
SNCB-201ENST00000310112 FCGBPQ9Y6R7 5405 aaPredicted RBP8.56□□□□□ -1.04
SNCB-201ENST00000310112 LUZP6Q538Z0 58 aa8.55□□□□□ -1.04
SNCB-201ENST00000310112 FSIP2Q5CZC0 6907 aa8.52□□□□□ -1.04
SNCB-201ENST00000310112 MT1EP04732 61 aa8.52□□□□□ -1.05
SNCB-201ENST00000310112 KMT2DO14686 5537 aa8.47□□□□□ -1.05
SNCB-201ENST00000310112 LCE3CQ5T5A8 94 aa8.42□□□□□ -1.06
SNCB-201ENST00000310112 MT1LQ93083 61 aa8.38□□□□□ -1.07
SNCB-201ENST00000310112 NDUFAF8A1L188 74 aa8.36□□□□□ -1.07
SNCB-201ENST00000310112 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
SNCB-201ENST00000310112 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
SNCB-201ENST00000310112 MT1GP13640 62 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms