RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 RPS29P62273 56 aaKnown RBP10.6□□□□□ -0.71
TSPAN17-202ENST00000310032 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
TSPAN17-202ENST00000310032 RYR1P21817 5038 aa10.57□□□□□ -0.72
TSPAN17-202ENST00000310032 FAT3Q8TDW7 4589 aa10.55□□□□□ -0.72
TSPAN17-202ENST00000310032 CRIPTQ9P021 101 aa10.55□□□□□ -0.72
TSPAN17-202ENST00000310032 DMBT1Q9UGM3 2413 aaPredicted RBP10.54□□□□□ -0.72
TSPAN17-202ENST00000310032 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
TSPAN17-202ENST00000310032 COX6B2Q6YFQ2 88 aa10.49□□□□□ -0.73
TSPAN17-202ENST00000310032 ROMO1P60602 79 aa10.46□□□□□ -0.74
TSPAN17-202ENST00000310032 Q5VSD8 79 aa10.46□□□□□ -0.74
TSPAN17-202ENST00000310032 K7ERS5 55 aa10.41□□□□□ -0.74
TSPAN17-202ENST00000310032 KRTAP10-8P60410 259 aa10.32□□□□□ -0.76
TSPAN17-202ENST00000310032 KRTAP10-6P60371 365 aaPredicted RBP10.28□□□□□ -0.76
TSPAN17-202ENST00000310032 KRTAP13-4Q3LI77 160 aa10.27□□□□□ -0.76
TSPAN17-202ENST00000310032 A0A0D9SG42 100 aa10.25□□□□□ -0.77
TSPAN17-202ENST00000310032 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
TSPAN17-202ENST00000310032 RPL37P61927 97 aaKnown RBP10.24□□□□□ -0.77
TSPAN17-202ENST00000310032 LPAP08519 4548 aa10.22□□□□□ -0.77
TSPAN17-202ENST00000310032 P0C880 135 aa10.21□□□□□ -0.78
TSPAN17-202ENST00000310032 ABCA13Q86UQ4 5058 aa10.17□□□□□ -0.78
TSPAN17-202ENST00000310032 KRTAP3-2Q9BYR7 98 aa10.17□□□□□ -0.78
TSPAN17-202ENST00000310032 MT1HL1P0DM35 61 aa10.16□□□□□ -0.78
TSPAN17-202ENST00000310032 TPRXLQ17RH7 258 aa10.15□□□□□ -0.78
TSPAN17-202ENST00000310032 LRP2P98164 4655 aa10.13□□□□□ -0.79
TSPAN17-202ENST00000310032 XP32Q5T750 250 aa10.09□□□□□ -0.79
TSPAN17-202ENST00000310032 KRTAP4-5Q9BYR2 181 aa10.09□□□□□ -0.79
TSPAN17-202ENST00000310032 C10orf95Q9H7T3 257 aa10.08□□□□□ -0.8
TSPAN17-202ENST00000310032 S4R3F8 94 aa10.05□□□□□ -0.8
TSPAN17-202ENST00000310032 SPINT4Q6UDR6 99 aa10.04□□□□□ -0.8
TSPAN17-202ENST00000310032 KRTAP12-2P59991 146 aa9.96□□□□□ -0.81
TSPAN17-202ENST00000310032 HERC2O95714 4834 aa9.84□□□□□ -0.83
TSPAN17-202ENST00000310032 KRTAP12-1P59990 96 aa9.83□□□□□ -0.84
TSPAN17-202ENST00000310032 KRTAP15-1Q3LI76 137 aa9.82□□□□□ -0.84
TSPAN17-202ENST00000310032 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
TSPAN17-202ENST00000310032 BIRC6Q9NR09 4857 aa9.69□□□□□ -0.86
TSPAN17-202ENST00000310032 MUC2Q02817 5179 aa9.61□□□□□ -0.87
TSPAN17-202ENST00000310032 M0QZ58 72 aa9.61□□□□□ -0.87
TSPAN17-202ENST00000310032 MUC17Q685J3 4493 aa9.55□□□□□ -0.88
TSPAN17-202ENST00000310032 J3QL48 77 aa9.52□□□□□ -0.89
TSPAN17-202ENST00000310032 HERC1Q15751 4861 aa9.51□□□□□ -0.89
TSPAN17-202ENST00000310032 A0A0A0MQY5 61 aa9.49□□□□□ -0.89
TSPAN17-202ENST00000310032 KRTAP4-1Q9BYQ7 146 aa9.49□□□□□ -0.89
TSPAN17-202ENST00000310032 PCLOQ9Y6V0 5065 aa9.47□□□□□ -0.89
TSPAN17-202ENST00000310032 R4GN34 69 aa9.36□□□□□ -0.91
TSPAN17-202ENST00000310032 SEC61BP60468 96 aaKnown RBP9.3□□□□□ -0.92
TSPAN17-202ENST00000310032 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
TSPAN17-202ENST00000310032 HMCN2Q8NDA2 5059 aa9.25□□□□□ -0.93
TSPAN17-202ENST00000310032 PLAC4Q8WY50 150 aa9.22□□□□□ -0.93
TSPAN17-202ENST00000310032 KRTAP19-2Q3LHN2 52 aa9.18□□□□□ -0.94
TSPAN17-202ENST00000310032 FAT4Q6V0I7 4981 aa9.17□□□□□ -0.94
TSPAN17-202ENST00000310032 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
TSPAN17-202ENST00000310032 UBR4Q5T4S7 5183 aa9.04□□□□□ -0.96
TSPAN17-202ENST00000310032 FLGP20930 4061 aaPredicted RBP9.01□□□□□ -0.97
TSPAN17-202ENST00000310032 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
TSPAN17-202ENST00000310032 PP632Q6XCG6 107 aa8.9□□□□□ -0.99
TSPAN17-202ENST00000310032 LUZP6Q538Z0 58 aa8.84□□□□□ -0.99
TSPAN17-202ENST00000310032 LCE2CQ5TA81 110 aa8.76□□□□□ -1.01
TSPAN17-202ENST00000310032 TNP1P09430 55 aa8.62□□□□□ -1.03
TSPAN17-202ENST00000310032 M0R2T5 61 aa8.52□□□□□ -1.05
TSPAN17-202ENST00000310032 MT1HP80294 61 aa8.52□□□□□ -1.05
TSPAN17-202ENST00000310032 SPRR5A0A1B0GTR4 108 aa8.48□□□□□ -1.05
TSPAN17-202ENST00000310032 KRTAP23-1A1A580 65 aa8.48□□□□□ -1.05
TSPAN17-202ENST00000310032 KRTAP19-1Q8IUB9 90 aa8.37□□□□□ -1.07
TSPAN17-202ENST00000310032 MT1FP04733 61 aa8.36□□□□□ -1.07
TSPAN17-202ENST00000310032 MT2AP02795 61 aa8.32□□□□□ -1.08
TSPAN17-202ENST00000310032 KRTAP9-8Q9BYQ0 159 aa8.29□□□□□ -1.08
TSPAN17-202ENST00000310032 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
TSPAN17-202ENST00000310032 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
TSPAN17-202ENST00000310032 LCE3AQ5TA76 89 aa8.19□□□□□ -1.1
TSPAN17-202ENST00000310032 USH2AO75445 5202 aa8.03□□□□□ -1.12
TSPAN17-202ENST00000310032 MT1BP07438 61 aa7.98□□□□□ -1.13
TSPAN17-202ENST00000310032 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
TSPAN17-202ENST00000310032 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
TSPAN17-202ENST00000310032 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
TSPAN17-202ENST00000310032 KRTAP10-5P60370 271 aa7.85□□□□□ -1.15
TSPAN17-202ENST00000310032 MT1XP80297 61 aa7.85□□□□□ -1.15
TSPAN17-202ENST00000310032 PRO2289Q9P1D8 64 aa7.82□□□□□ -1.16
TSPAN17-202ENST00000310032 LCE2AQ5TA79 106 aaPredicted RBP7.78□□□□□ -1.16
TSPAN17-202ENST00000310032 LCE2BO14633 110 aa7.74□□□□□ -1.17
TSPAN17-202ENST00000310032 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
TSPAN17-202ENST00000310032 KMT2DO14686 5537 aa7.71□□□□□ -1.18
TSPAN17-202ENST00000310032 INE1O15225 51 aa7.69□□□□□ -1.18
TSPAN17-202ENST00000310032 KRTAP10-12P60413 245 aa7.69□□□□□ -1.18
TSPAN17-202ENST00000310032 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
TSPAN17-202ENST00000310032 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
TSPAN17-202ENST00000310032 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
TSPAN17-202ENST00000310032 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
TSPAN17-202ENST00000310032 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
TSPAN17-202ENST00000310032 KRTAP19-5Q3LI72 72 aa7.34□□□□□ -1.23
TSPAN17-202ENST00000310032 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
TSPAN17-202ENST00000310032 KRTAP9-6A8MVA2 160 aa7.15□□□□□ -1.26
TSPAN17-202ENST00000310032 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
TSPAN17-202ENST00000310032 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
TSPAN17-202ENST00000310032 LCE2DQ5TA82 110 aaPredicted RBP6.97□□□□□ -1.29
TSPAN17-202ENST00000310032 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
TSPAN17-202ENST00000310032 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
TSPAN17-202ENST00000310032 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
TSPAN17-202ENST00000310032 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
TSPAN17-202ENST00000310032 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
TSPAN17-202ENST00000310032 MUC12Q9UKN1 5478 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms