RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LCA10Q71F78 164 aa11.16□□□□□ -0.62
IRF3-201ENST00000309877 KRTAP19-2Q3LHN2 52 aa11.15□□□□□ -0.62
IRF3-201ENST00000309877 RNF213Q63HN8 5207 aa11.11□□□□□ -0.63
IRF3-201ENST00000309877 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
IRF3-201ENST00000309877 V9GYY9 64 aa11.04□□□□□ -0.64
IRF3-201ENST00000309877 Q1T7F1 81 aa11.03□□□□□ -0.64
IRF3-201ENST00000309877 CSAG1Q6PB30 78 aa10.98□□□□□ -0.65
IRF3-201ENST00000309877 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
IRF3-201ENST00000309877 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
IRF3-201ENST00000309877 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
IRF3-201ENST00000309877 A0A1B0GU69 56 aa10.88□□□□□ -0.67
IRF3-201ENST00000309877 SEC61GP60059 68 aa10.88□□□□□ -0.67
IRF3-201ENST00000309877 PSPHP1O15172 72 aa10.87□□□□□ -0.67
IRF3-201ENST00000309877 FLGP20930 4061 aaPredicted RBP10.82□□□□□ -0.68
IRF3-201ENST00000309877 MT1HP80294 61 aa10.76□□□□□ -0.69
IRF3-201ENST00000309877 Q5VV11 94 aa10.74□□□□□ -0.69
IRF3-201ENST00000309877 FAT4Q6V0I7 4981 aa10.74□□□□□ -0.69
IRF3-201ENST00000309877 M0R2T5 61 aa10.73□□□□□ -0.69
IRF3-201ENST00000309877 ADM2Q7Z4H4 148 aa10.7□□□□□ -0.7
IRF3-201ENST00000309877 H0YAA0 97 aa10.69□□□□□ -0.7
IRF3-201ENST00000309877 KRTAP3-2Q9BYR7 98 aa10.66□□□□□ -0.7
IRF3-201ENST00000309877 KRTAP10-6P60371 365 aaPredicted RBP10.63□□□□□ -0.71
IRF3-201ENST00000309877 P0C880 135 aa10.6□□□□□ -0.71
IRF3-201ENST00000309877 A0A1B0GU33 70 aa10.57□□□□□ -0.72
IRF3-201ENST00000309877 A6NED7 52 aa10.55□□□□□ -0.72
IRF3-201ENST00000309877 UQCR11O14957 56 aa10.52□□□□□ -0.73
IRF3-201ENST00000309877 MIR22HGQ0VDD5 57 aa10.4□□□□□ -0.74
IRF3-201ENST00000309877 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
IRF3-201ENST00000309877 LCE2AQ5TA79 106 aaPredicted RBP10.38□□□□□ -0.75
IRF3-201ENST00000309877 BRK1Q8WUW1 75 aa10.36□□□□□ -0.75
IRF3-201ENST00000309877 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
IRF3-201ENST00000309877 M0QZ58 72 aa10.34□□□□□ -0.75
IRF3-201ENST00000309877 R4GN34 69 aa10.34□□□□□ -0.75
IRF3-201ENST00000309877 KRTAP13-4Q3LI77 160 aa10.34□□□□□ -0.75
IRF3-201ENST00000309877 KRTAP9-8Q9BYQ0 159 aa10.34□□□□□ -0.75
IRF3-201ENST00000309877 CDC42SE1Q9NRR8 79 aa10.32□□□□□ -0.76
IRF3-201ENST00000309877 MT2AP02795 61 aa10.31□□□□□ -0.76
IRF3-201ENST00000309877 CRIPTQ9P021 101 aa10.28□□□□□ -0.76
IRF3-201ENST00000309877 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
IRF3-201ENST00000309877 MT1FP04733 61 aa10.25□□□□□ -0.77
IRF3-201ENST00000309877 A8MU10 97 aa10.23□□□□□ -0.77
IRF3-201ENST00000309877 A0A0D9SG42 100 aa10.2□□□□□ -0.78
IRF3-201ENST00000309877 LINC01554Q52M75 96 aa10.16□□□□□ -0.78
IRF3-201ENST00000309877 SPRR2GQ9BYE4 73 aa10.06□□□□□ -0.8
IRF3-201ENST00000309877 PRO0628Q9UI54 55 aa10.05□□□□□ -0.8
IRF3-201ENST00000309877 KRTAP19-1Q8IUB9 90 aa10.02□□□□□ -0.8
IRF3-201ENST00000309877 K7ERS5 55 aa9.99□□□□□ -0.81
IRF3-201ENST00000309877 SPINT4Q6UDR6 99 aa9.98□□□□□ -0.81
IRF3-201ENST00000309877 KRTAP9-3Q9BYQ3 159 aa9.97□□□□□ -0.81
IRF3-201ENST00000309877 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
IRF3-201ENST00000309877 KRTAP12-2P59991 146 aa9.93□□□□□ -0.82
IRF3-201ENST00000309877 A6NN06 94 aa9.92□□□□□ -0.82
IRF3-201ENST00000309877 KRTAP19-8Q3LI54 63 aa9.8□□□□□ -0.84
IRF3-201ENST00000309877 PMAIP1Q13794 54 aa9.79□□□□□ -0.84
IRF3-201ENST00000309877 SVIPQ8NHG7 77 aa9.77□□□□□ -0.84
IRF3-201ENST00000309877 PLAC4Q8WY50 150 aa9.77□□□□□ -0.84
IRF3-201ENST00000309877 LCE2BO14633 110 aa9.71□□□□□ -0.86
IRF3-201ENST00000309877 CAMK2N1Q7Z7J9 78 aa9.7□□□□□ -0.86
IRF3-201ENST00000309877 MT1BP07438 61 aa9.67□□□□□ -0.86
IRF3-201ENST00000309877 ROMO1P60602 79 aa9.51□□□□□ -0.89
IRF3-201ENST00000309877 LCE2DQ5TA82 110 aaPredicted RBP9.49□□□□□ -0.89
IRF3-201ENST00000309877 C10orf95Q9H7T3 257 aa9.42□□□□□ -0.9
IRF3-201ENST00000309877 USH2AO75445 5202 aa9.42□□□□□ -0.9
IRF3-201ENST00000309877 MT1XP80297 61 aa9.34□□□□□ -0.91
IRF3-201ENST00000309877 KRTAP10-5P60370 271 aa9.32□□□□□ -0.92
IRF3-201ENST00000309877 KTN1-AS1Q86SY8 53 aa9.32□□□□□ -0.92
IRF3-201ENST00000309877 PRO2289Q9P1D8 64 aa9.32□□□□□ -0.92
IRF3-201ENST00000309877 TNP1P09430 55 aa9.19□□□□□ -0.94
IRF3-201ENST00000309877 KRTAP25-1Q3LHN0 102 aa9.18□□□□□ -0.94
IRF3-201ENST00000309877 KRTAP9-2Q9BYQ4 174 aa9.17□□□□□ -0.94
IRF3-201ENST00000309877 PRAC1Q96KF2 57 aa9.16□□□□□ -0.94
IRF3-201ENST00000309877 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
IRF3-201ENST00000309877 SSPOA2VEC9 5147 aa9.12□□□□□ -0.95
IRF3-201ENST00000309877 FSIP2Q5CZC0 6907 aa9.06□□□□□ -0.96
IRF3-201ENST00000309877 KRTAP10-7P60409 375 aaPredicted RBP8.97□□□□□ -0.97
IRF3-201ENST00000309877 KRTAP10-12P60413 245 aa8.87□□□□□ -0.99
IRF3-201ENST00000309877 PP632Q6XCG6 107 aa8.85□□□□□ -0.99
IRF3-201ENST00000309877 KRTAP23-1A1A580 65 aa8.85□□□□□ -0.99
IRF3-201ENST00000309877 CRCT1Q9UGL9 99 aa8.85□□□□□ -0.99
IRF3-201ENST00000309877 LCE3AQ5TA76 89 aa8.79□□□□□ -1
IRF3-201ENST00000309877 FCGBPQ9Y6R7 5405 aaPredicted RBP8.77□□□□□ -1.01
IRF3-201ENST00000309877 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.03
IRF3-201ENST00000309877 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.03
IRF3-201ENST00000309877 KRTAP8-1Q8IUC2 63 aa8.59□□□□□ -1.03
IRF3-201ENST00000309877 KMT2DO14686 5537 aa8.56□□□□□ -1.04
IRF3-201ENST00000309877 KRTAP9-6A0A140TA67 174 aa8.49□□□□□ -1.05
IRF3-201ENST00000309877 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
IRF3-201ENST00000309877 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
IRF3-201ENST00000309877 KRTAP19-7Q3SYF9 63 aa8.33□□□□□ -1.08
IRF3-201ENST00000309877 MACF1Q9UPN3 7388 aaKnown RBP8.3□□□□□ -1.08
IRF3-201ENST00000309877 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
IRF3-201ENST00000309877 MT1EP04732 61 aa8.2□□□□□ -1.1
IRF3-201ENST00000309877 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
IRF3-201ENST00000309877 SPRR2FQ96RM1 72 aa8.14□□□□□ -1.11
IRF3-201ENST00000309877 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
IRF3-201ENST00000309877 KRTAP5-9P26371 169 aa8.04□□□□□ -1.12
IRF3-201ENST00000309877 MT1LQ93083 61 aa8.03□□□□□ -1.12
IRF3-201ENST00000309877 KRTAP6-3Q3LI67 103 aa7.97□□□□□ -1.13
IRF3-201ENST00000309877 MUC12Q9UKN1 5478 aa7.95□□□□□ -1.14
IRF3-201ENST00000309877 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms