RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 A0A1B0GU33 70 aa12.65□□□□□ -0.38
FOXA3-201ENST00000302177 H0YAA0 97 aa12.63□□□□□ -0.39
FOXA3-201ENST00000302177 PRAC1Q96KF2 57 aa12.61□□□□□ -0.39
FOXA3-201ENST00000302177 H1FX-AS1Q4G0G2 97 aa12.61□□□□□ -0.39
FOXA3-201ENST00000302177 ADM2Q7Z4H4 148 aa12.6□□□□□ -0.39
FOXA3-201ENST00000302177 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
FOXA3-201ENST00000302177 RPL37P61927 97 aaKnown RBP12.55□□□□□ -0.4
FOXA3-201ENST00000302177 FAT3Q8TDW7 4589 aa12.52□□□□□ -0.4
FOXA3-201ENST00000302177 TNXBP22105 4242 aa12.51□□□□□ -0.41
FOXA3-201ENST00000302177 LRP1Q07954 4544 aaKnown RBP12.47□□□□□ -0.41
FOXA3-201ENST00000302177 XP32Q5T750 250 aa12.43□□□□□ -0.42
FOXA3-201ENST00000302177 DMBT1Q9UGM3 2413 aaPredicted RBP12.36□□□□□ -0.43
FOXA3-201ENST00000302177 KRTAP3-3Q9BYR6 98 aa12.36□□□□□ -0.43
FOXA3-201ENST00000302177 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
FOXA3-201ENST00000302177 CSAG1Q6PB30 78 aa12.34□□□□□ -0.43
FOXA3-201ENST00000302177 J3QL48 77 aa12.3□□□□□ -0.44
FOXA3-201ENST00000302177 K7ERS5 55 aa12.29□□□□□ -0.44
FOXA3-201ENST00000302177 HERC1Q15751 4861 aa12.27□□□□□ -0.44
FOXA3-201ENST00000302177 KRTAP10-6P60371 365 aaPredicted RBP12.26□□□□□ -0.45
FOXA3-201ENST00000302177 S4R3F8 94 aa12.26□□□□□ -0.45
FOXA3-201ENST00000302177 MT1HL1P0DM35 61 aa12.23□□□□□ -0.45
FOXA3-201ENST00000302177 KRTAP3-2Q9BYR7 98 aa12.18□□□□□ -0.46
FOXA3-201ENST00000302177 KRTAP25-1Q3LHN0 102 aa12.1□□□□□ -0.47
FOXA3-201ENST00000302177 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
FOXA3-201ENST00000302177 KRTAP13-4Q3LI77 160 aa12.04□□□□□ -0.48
FOXA3-201ENST00000302177 ROMO1P60602 79 aa11.98□□□□□ -0.49
FOXA3-201ENST00000302177 P0C880 135 aa11.95□□□□□ -0.5
FOXA3-201ENST00000302177 A0A0D9SG42 100 aa11.9□□□□□ -0.5
FOXA3-201ENST00000302177 HMCN2Q8NDA2 5059 aa11.84□□□□□ -0.51
FOXA3-201ENST00000302177 M0QZ58 72 aa11.76□□□□□ -0.53
FOXA3-201ENST00000302177 CRIPTQ9P021 101 aa11.71□□□□□ -0.53
FOXA3-201ENST00000302177 KRTAP12-2P59991 146 aa11.67□□□□□ -0.54
FOXA3-201ENST00000302177 LRP2P98164 4655 aa11.66□□□□□ -0.54
FOXA3-201ENST00000302177 KRTAP12-1P59990 96 aa11.65□□□□□ -0.55
FOXA3-201ENST00000302177 LPAP08519 4548 aa11.63□□□□□ -0.55
FOXA3-201ENST00000302177 SEC61BP60468 96 aaKnown RBP11.61□□□□□ -0.55
FOXA3-201ENST00000302177 UBR4Q5T4S7 5183 aa11.57□□□□□ -0.56
FOXA3-201ENST00000302177 SPINT4Q6UDR6 99 aa11.56□□□□□ -0.56
FOXA3-201ENST00000302177 C10orf95Q9H7T3 257 aa11.36□□□□□ -0.59
FOXA3-201ENST00000302177 R4GN34 69 aa11.36□□□□□ -0.59
FOXA3-201ENST00000302177 RNF213Q63HN8 5207 aa11.32□□□□□ -0.6
FOXA3-201ENST00000302177 MUC17Q685J3 4493 aa11.31□□□□□ -0.6
FOXA3-201ENST00000302177 KRTAP4-1Q9BYQ7 146 aa11.29□□□□□ -0.6
FOXA3-201ENST00000302177 KRTAP19-2Q3LHN2 52 aa11.2□□□□□ -0.62
FOXA3-201ENST00000302177 MUC2Q02817 5179 aa11.2□□□□□ -0.62
FOXA3-201ENST00000302177 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
FOXA3-201ENST00000302177 H3BS24 57 aa11.04□□□□□ -0.64
FOXA3-201ENST00000302177 KRTAP15-1Q3LI76 137 aa11.01□□□□□ -0.65
FOXA3-201ENST00000302177 CAMK2N1Q7Z7J9 78 aa10.76□□□□□ -0.69
FOXA3-201ENST00000302177 FLGP20930 4061 aaPredicted RBP10.76□□□□□ -0.69
FOXA3-201ENST00000302177 FAT4Q6V0I7 4981 aa10.73□□□□□ -0.69
FOXA3-201ENST00000302177 PP632Q6XCG6 107 aa10.72□□□□□ -0.69
FOXA3-201ENST00000302177 NDUFAF8A1L188 74 aa10.61□□□□□ -0.71
FOXA3-201ENST00000302177 PLAC4Q8WY50 150 aa10.58□□□□□ -0.72
FOXA3-201ENST00000302177 LCE2AQ5TA79 106 aaPredicted RBP10.52□□□□□ -0.72
FOXA3-201ENST00000302177 LCE2CQ5TA81 110 aa10.52□□□□□ -0.73
FOXA3-201ENST00000302177 KRTAP23-1A1A580 65 aa10.46□□□□□ -0.73
FOXA3-201ENST00000302177 TNP1P09430 55 aa10.43□□□□□ -0.74
FOXA3-201ENST00000302177 SPRR2GQ9BYE4 73 aa10.39□□□□□ -0.75
FOXA3-201ENST00000302177 MT1HP80294 61 aa10.35□□□□□ -0.75
FOXA3-201ENST00000302177 KRTAP19-1Q8IUB9 90 aa10.26□□□□□ -0.77
FOXA3-201ENST00000302177 M0R2T5 61 aa10.21□□□□□ -0.78
FOXA3-201ENST00000302177 LUZP6Q538Z0 58 aa10.09□□□□□ -0.79
FOXA3-201ENST00000302177 MT2AP02795 61 aa10.05□□□□□ -0.8
FOXA3-201ENST00000302177 MT1FP04733 61 aa10.02□□□□□ -0.81
FOXA3-201ENST00000302177 KRTAP10-10P60014 251 aa10.02□□□□□ -0.81
FOXA3-201ENST00000302177 KRTAP9-8Q9BYQ0 159 aa10.01□□□□□ -0.81
FOXA3-201ENST00000302177 KRTAP9-2Q9BYQ4 174 aa9.97□□□□□ -0.81
FOXA3-201ENST00000302177 SPRR5A0A1B0GTR4 108 aa9.95□□□□□ -0.82
FOXA3-201ENST00000302177 KRTAP19-8Q3LI54 63 aa9.95□□□□□ -0.82
FOXA3-201ENST00000302177 LCE2DQ5TA82 110 aaPredicted RBP9.81□□□□□ -0.84
FOXA3-201ENST00000302177 LCE3AQ5TA76 89 aa9.79□□□□□ -0.84
FOXA3-201ENST00000302177 FSIP2Q5CZC0 6907 aa9.73□□□□□ -0.85
FOXA3-201ENST00000302177 MT1BP07438 61 aa9.73□□□□□ -0.85
FOXA3-201ENST00000302177 KRTAP8-1Q8IUC2 63 aa9.68□□□□□ -0.86
FOXA3-201ENST00000302177 KRTAP10-5P60370 271 aa9.67□□□□□ -0.86
FOXA3-201ENST00000302177 MT1XP80297 61 aa9.64□□□□□ -0.87
FOXA3-201ENST00000302177 KRTAP9-3Q9BYQ3 159 aa9.59□□□□□ -0.87
FOXA3-201ENST00000302177 A0A0A0MQY5 61 aa9.56□□□□□ -0.88
FOXA3-201ENST00000302177 KRTAP9-6A0A140TA67 174 aa9.49□□□□□ -0.89
FOXA3-201ENST00000302177 CRCT1Q9UGL9 99 aa9.46□□□□□ -0.89
FOXA3-201ENST00000302177 KRTAP10-12P60413 245 aa9.46□□□□□ -0.9
FOXA3-201ENST00000302177 LCE2BO14633 110 aa9.44□□□□□ -0.9
FOXA3-201ENST00000302177 USH2AO75445 5202 aa9.43□□□□□ -0.9
FOXA3-201ENST00000302177 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
FOXA3-201ENST00000302177 KRTAP12-3P60328 96 aa9.38□□□□□ -0.91
FOXA3-201ENST00000302177 KRTAP10-7P60409 375 aaPredicted RBP9.32□□□□□ -0.92
FOXA3-201ENST00000302177 SSPOA2VEC9 5147 aa9.29□□□□□ -0.92
FOXA3-201ENST00000302177 FCGBPQ9Y6R7 5405 aaPredicted RBP9.02□□□□□ -0.97
FOXA3-201ENST00000302177 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
FOXA3-201ENST00000302177 KRTAP19-5Q3LI72 72 aa8.95□□□□□ -0.98
FOXA3-201ENST00000302177 LCE3CQ5T5A8 94 aa8.85□□□□□ -0.99
FOXA3-201ENST00000302177 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.79□□□□□ -1
FOXA3-201ENST00000302177 INE1O15225 51 aa8.76□□□□□ -1.01
FOXA3-201ENST00000302177 MACF1Q9UPN3 7388 aaKnown RBP8.74□□□□□ -1.01
FOXA3-201ENST00000302177 KRTAP4-8A0A0G2JLE6 195 aa8.7□□□□□ -1.02
FOXA3-201ENST00000302177 KRTAP4-8Q9BYQ9 185 aa8.7□□□□□ -1.02
FOXA3-201ENST00000302177 KRTAP19-4Q3LI73 84 aa8.68□□□□□ -1.02
FOXA3-201ENST00000302177 SYNE2Q8WXH0 6885 aaKnown RBP8.62□□□□□ -1.03
FOXA3-201ENST00000302177 KRTAP19-7Q3SYF9 63 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms