RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
CTTN-201ENST00000301843 RYR2Q92736 4967 aa7.06□□□□□ -1.28
CTTN-201ENST00000301843 LPAP08519 4548 aa7.03□□□□□ -1.28
CTTN-201ENST00000301843 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
CTTN-201ENST00000301843 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
CTTN-201ENST00000301843 TNXBP22105 4242 aa7.02□□□□□ -1.29
CTTN-201ENST00000301843 KRTAP13-4Q3LI77 160 aa7.01□□□□□ -1.29
CTTN-201ENST00000301843 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.29
CTTN-201ENST00000301843 KRTAP10-6P60371 365 aaPredicted RBP6.95□□□□□ -1.3
CTTN-201ENST00000301843 K7ERS5 55 aa6.94□□□□□ -1.3
CTTN-201ENST00000301843 P0C880 135 aa6.92□□□□□ -1.3
CTTN-201ENST00000301843 LRP2P98164 4655 aa6.91□□□□□ -1.3
CTTN-201ENST00000301843 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.31
CTTN-201ENST00000301843 Q5VSD8 79 aa6.89□□□□□ -1.31
CTTN-201ENST00000301843 C10orf95Q9H7T3 257 aa6.89□□□□□ -1.31
CTTN-201ENST00000301843 KRTAP17-1Q9BYP8 105 aa6.88□□□□□ -1.31
CTTN-201ENST00000301843 XP32Q5T750 250 aa6.88□□□□□ -1.31
CTTN-201ENST00000301843 KRTAP3-2Q9BYR7 98 aa6.88□□□□□ -1.31
CTTN-201ENST00000301843 RYR3Q15413 4870 aa6.88□□□□□ -1.31
CTTN-201ENST00000301843 S4R3F8 94 aa6.87□□□□□ -1.31
CTTN-201ENST00000301843 RPL37P61927 97 aaKnown RBP6.86□□□□□ -1.31
CTTN-201ENST00000301843 ROMO1P60602 79 aa6.86□□□□□ -1.31
CTTN-201ENST00000301843 J3QL48 77 aa6.83□□□□□ -1.32
CTTN-201ENST00000301843 RYR1P21817 5038 aa6.81□□□□□ -1.32
CTTN-201ENST00000301843 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
CTTN-201ENST00000301843 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
CTTN-201ENST00000301843 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
CTTN-201ENST00000301843 ABCA13Q86UQ4 5058 aa6.74□□□□□ -1.33
CTTN-201ENST00000301843 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
CTTN-201ENST00000301843 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
CTTN-201ENST00000301843 EPPK1P58107 5090 aaKnown RBP6.66□□□□□ -1.34
CTTN-201ENST00000301843 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
CTTN-201ENST00000301843 M0QZ58 72 aa6.52□□□□□ -1.37
CTTN-201ENST00000301843 MUC2Q02817 5179 aa6.51□□□□□ -1.37
CTTN-201ENST00000301843 NDUFAF8A1L188 74 aa6.5□□□□□ -1.37
CTTN-201ENST00000301843 KRTAP4-5Q9BYR2 181 aa6.5□□□□□ -1.37
CTTN-201ENST00000301843 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
CTTN-201ENST00000301843 R4GN34 69 aa6.44□□□□□ -1.38
CTTN-201ENST00000301843 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CTTN-201ENST00000301843 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
CTTN-201ENST00000301843 KRTAP4-1Q9BYQ7 146 aa6.36□□□□□ -1.39
CTTN-201ENST00000301843 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
CTTN-201ENST00000301843 HERC2O95714 4834 aa6.27□□□□□ -1.41
CTTN-201ENST00000301843 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
CTTN-201ENST00000301843 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
CTTN-201ENST00000301843 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.43
CTTN-201ENST00000301843 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
CTTN-201ENST00000301843 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
CTTN-201ENST00000301843 HERC1Q15751 4861 aa6.13□□□□□ -1.43
CTTN-201ENST00000301843 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
CTTN-201ENST00000301843 RNF213Q63HN8 5207 aa5.99□□□□□ -1.45
CTTN-201ENST00000301843 BIRC6Q9NR09 4857 aa5.98□□□□□ -1.45
CTTN-201ENST00000301843 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
CTTN-201ENST00000301843 HMCN2Q8NDA2 5059 aa5.84□□□□□ -1.47
CTTN-201ENST00000301843 TNP1P09430 55 aa5.83□□□□□ -1.48
CTTN-201ENST00000301843 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
CTTN-201ENST00000301843 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
CTTN-201ENST00000301843 UBR4Q5T4S7 5183 aa5.81□□□□□ -1.48
CTTN-201ENST00000301843 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
CTTN-201ENST00000301843 M0R2T5 61 aa5.78□□□□□ -1.48
CTTN-201ENST00000301843 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
CTTN-201ENST00000301843 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.51
CTTN-201ENST00000301843 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
CTTN-201ENST00000301843 MT1HP80294 61 aa5.62□□□□□ -1.51
CTTN-201ENST00000301843 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
CTTN-201ENST00000301843 MT1FP04733 61 aa5.58□□□□□ -1.52
CTTN-201ENST00000301843 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
CTTN-201ENST00000301843 MT2AP02795 61 aa5.53□□□□□ -1.52
CTTN-201ENST00000301843 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
CTTN-201ENST00000301843 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
CTTN-201ENST00000301843 USH2AO75445 5202 aa5.44□□□□□ -1.54
CTTN-201ENST00000301843 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CTTN-201ENST00000301843 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
CTTN-201ENST00000301843 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
CTTN-201ENST00000301843 MT1BP07438 61 aa5.36□□□□□ -1.55
CTTN-201ENST00000301843 MT1XP80297 61 aa5.36□□□□□ -1.55
CTTN-201ENST00000301843 LCE2BO14633 110 aa5.35□□□□□ -1.55
CTTN-201ENST00000301843 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
CTTN-201ENST00000301843 LCE2AQ5TA79 106 aaPredicted RBP5.31□□□□□ -1.56
CTTN-201ENST00000301843 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
CTTN-201ENST00000301843 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
CTTN-201ENST00000301843 KRTAP12-3P60328 96 aa5.29□□□□□ -1.56
CTTN-201ENST00000301843 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
CTTN-201ENST00000301843 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
CTTN-201ENST00000301843 PRO2289Q9P1D8 64 aa5.08□□□□□ -1.6
CTTN-201ENST00000301843 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
CTTN-201ENST00000301843 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
CTTN-201ENST00000301843 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
CTTN-201ENST00000301843 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.61
CTTN-201ENST00000301843 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
CTTN-201ENST00000301843 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
CTTN-201ENST00000301843 INE1O15225 51 aa4.89□□□□□ -1.63
CTTN-201ENST00000301843 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
CTTN-201ENST00000301843 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
CTTN-201ENST00000301843 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
CTTN-201ENST00000301843 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
CTTN-201ENST00000301843 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
CTTN-201ENST00000301843 MT1LQ93083 61 aa4.62□□□□□ -1.67
CTTN-201ENST00000301843 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
CTTN-201ENST00000301843 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms