RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 Q5VSD8 79 aa5.13□□□□□ -1.59
TUBA1A-202ENST00000301071 Q8N1X5 172 aa5.13□□□□□ -1.59
TUBA1A-202ENST00000301071 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
TUBA1A-202ENST00000301071 LINC00304Q8N9R0 145 aa5.11□□□□□ -1.59
TUBA1A-202ENST00000301071 H0YAA0 97 aa5.09□□□□□ -1.59
TUBA1A-202ENST00000301071 A0A1B0GU33 70 aa5.09□□□□□ -1.6
TUBA1A-202ENST00000301071 SPINK1P00995 79 aa5.09□□□□□ -1.6
TUBA1A-202ENST00000301071 ABCA13Q86UQ4 5058 aa5.08□□□□□ -1.6
TUBA1A-202ENST00000301071 KRTAP4-5Q9BYR2 181 aa5.08□□□□□ -1.6
TUBA1A-202ENST00000301071 H1FX-AS1Q4G0G2 97 aa5.06□□□□□ -1.6
TUBA1A-202ENST00000301071 FLG2Q5D862 2391 aaPredicted RBP5.06□□□□□ -1.6
TUBA1A-202ENST00000301071 KRTAP1-4P0C5Y4 121 aa5.05□□□□□ -1.6
TUBA1A-202ENST00000301071 P0C880 135 aa5.05□□□□□ -1.6
TUBA1A-202ENST00000301071 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
TUBA1A-202ENST00000301071 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
TUBA1A-202ENST00000301071 FAT3Q8TDW7 4589 aa5.03□□□□□ -1.6
TUBA1A-202ENST00000301071 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
TUBA1A-202ENST00000301071 KRTAP13-2Q52LG2 175 aa5□□□□□ -1.61
TUBA1A-202ENST00000301071 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
TUBA1A-202ENST00000301071 TYMSOSQ8TAI1 123 aa4.97□□□□□ -1.61
TUBA1A-202ENST00000301071 TNXBP22105 4242 aa4.97□□□□□ -1.61
TUBA1A-202ENST00000301071 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
TUBA1A-202ENST00000301071 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
TUBA1A-202ENST00000301071 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
TUBA1A-202ENST00000301071 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
TUBA1A-202ENST00000301071 HERC1Q15751 4861 aa4.92□□□□□ -1.62
TUBA1A-202ENST00000301071 DMBT1Q9UGM3 2413 aaPredicted RBP4.92□□□□□ -1.62
TUBA1A-202ENST00000301071 SPINT4Q6UDR6 99 aa4.91□□□□□ -1.62
TUBA1A-202ENST00000301071 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.62
TUBA1A-202ENST00000301071 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
TUBA1A-202ENST00000301071 RPL37P61927 97 aaKnown RBP4.89□□□□□ -1.63
TUBA1A-202ENST00000301071 KRTAP3-1Q9BYR8 98 aa4.85□□□□□ -1.63
TUBA1A-202ENST00000301071 CRIPTQ9P021 101 aa4.85□□□□□ -1.63
TUBA1A-202ENST00000301071 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.63
TUBA1A-202ENST00000301071 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
TUBA1A-202ENST00000301071 TPRXLQ17RH7 258 aa4.79□□□□□ -1.64
TUBA1A-202ENST00000301071 C9orf92A6NGG3 77 aa4.74□□□□□ -1.65
TUBA1A-202ENST00000301071 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
TUBA1A-202ENST00000301071 A0A0D9SG42 100 aa4.7□□□□□ -1.66
TUBA1A-202ENST00000301071 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
TUBA1A-202ENST00000301071 S4R3F8 94 aa4.69□□□□□ -1.66
TUBA1A-202ENST00000301071 LPAP08519 4548 aa4.68□□□□□ -1.66
TUBA1A-202ENST00000301071 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
TUBA1A-202ENST00000301071 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
TUBA1A-202ENST00000301071 HMCN2Q8NDA2 5059 aa4.65□□□□□ -1.67
TUBA1A-202ENST00000301071 LRP2P98164 4655 aa4.63□□□□□ -1.67
TUBA1A-202ENST00000301071 KRTAP4-8Q9BYQ9 185 aa4.62□□□□□ -1.67
TUBA1A-202ENST00000301071 XP32Q5T750 250 aa4.62□□□□□ -1.67
TUBA1A-202ENST00000301071 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
TUBA1A-202ENST00000301071 M0QZ58 72 aa4.58□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
TUBA1A-202ENST00000301071 LORP23490 312 aaPredicted RBP4.55□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
TUBA1A-202ENST00000301071 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP9-2Q9BYQ4 174 aa4.53□□□□□ -1.68
TUBA1A-202ENST00000301071 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
TUBA1A-202ENST00000301071 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
TUBA1A-202ENST00000301071 PLAC4Q8WY50 150 aa4.46□□□□□ -1.69
TUBA1A-202ENST00000301071 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
TUBA1A-202ENST00000301071 PRO2289Q9P1D8 64 aa4.4□□□□□ -1.71
TUBA1A-202ENST00000301071 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
TUBA1A-202ENST00000301071 PP632Q6XCG6 107 aa4.39□□□□□ -1.71
TUBA1A-202ENST00000301071 MUC2Q02817 5179 aa4.37□□□□□ -1.71
TUBA1A-202ENST00000301071 R4GN34 69 aa4.33□□□□□ -1.72
TUBA1A-202ENST00000301071 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
TUBA1A-202ENST00000301071 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
TUBA1A-202ENST00000301071 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
TUBA1A-202ENST00000301071 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
TUBA1A-202ENST00000301071 KRTAP19-2Q3LHN2 52 aa4.28□□□□□ -1.72
TUBA1A-202ENST00000301071 FAT4Q6V0I7 4981 aa4.25□□□□□ -1.73
TUBA1A-202ENST00000301071 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
TUBA1A-202ENST00000301071 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
TUBA1A-202ENST00000301071 MT1HP80294 61 aa4.16□□□□□ -1.74
TUBA1A-202ENST00000301071 INE1O15225 51 aa4.15□□□□□ -1.74
TUBA1A-202ENST00000301071 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
TUBA1A-202ENST00000301071 KRTAP19-1Q8IUB9 90 aa4.11□□□□□ -1.75
TUBA1A-202ENST00000301071 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
TUBA1A-202ENST00000301071 M0R2T5 61 aa4.08□□□□□ -1.76
TUBA1A-202ENST00000301071 TNP1P09430 55 aa4.08□□□□□ -1.76
TUBA1A-202ENST00000301071 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
TUBA1A-202ENST00000301071 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
TUBA1A-202ENST00000301071 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
TUBA1A-202ENST00000301071 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
TUBA1A-202ENST00000301071 MT2AP02795 61 aa3.95□□□□□ -1.78
TUBA1A-202ENST00000301071 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
TUBA1A-202ENST00000301071 MT1FP04733 61 aa3.93□□□□□ -1.78
TUBA1A-202ENST00000301071 KRTAP10-10P60014 251 aa3.9□□□□□ -1.78
TUBA1A-202ENST00000301071 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
TUBA1A-202ENST00000301071 KRTAP4-11Q9BYQ6 195 aa3.82□□□□□ -1.8
TUBA1A-202ENST00000301071 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
TUBA1A-202ENST00000301071 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
TUBA1A-202ENST00000301071 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
TUBA1A-202ENST00000301071 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
TUBA1A-202ENST00000301071 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
TUBA1A-202ENST00000301071 USH2AO75445 5202 aa3.7□□□□□ -1.82
TUBA1A-202ENST00000301071 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
TUBA1A-202ENST00000301071 MT1BP07438 61 aa3.69□□□□□ -1.82
TUBA1A-202ENST00000301071 SSPOA2VEC9 5147 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms