RNA–Protein interactions for RNA: ENST00000300954.9

PCSK4-201, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK4, Length 2,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-201ENST00000300954 KIAA1109Q2LD37 5005 aa8.54□□□□□ -1.04
PCSK4-201ENST00000300954 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
PCSK4-201ENST00000300954 H3BS24 57 aa8.51□□□□□ -1.05
PCSK4-201ENST00000300954 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
PCSK4-201ENST00000300954 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
PCSK4-201ENST00000300954 EPPK1P58107 5090 aaKnown RBP8.43□□□□□ -1.06
PCSK4-201ENST00000300954 LINC01554Q52M75 96 aa8.38□□□□□ -1.07
PCSK4-201ENST00000300954 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
PCSK4-201ENST00000300954 H0YAA0 97 aa8.35□□□□□ -1.07
PCSK4-201ENST00000300954 A0A1B0GU33 70 aa8.33□□□□□ -1.08
PCSK4-201ENST00000300954 H1FX-AS1Q4G0G2 97 aa8.33□□□□□ -1.08
PCSK4-201ENST00000300954 TPRXLQ17RH7 258 aa8.31□□□□□ -1.08
PCSK4-201ENST00000300954 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
PCSK4-201ENST00000300954 S4R3F8 94 aa8.25□□□□□ -1.09
PCSK4-201ENST00000300954 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
PCSK4-201ENST00000300954 LPAP08519 4548 aa8.23□□□□□ -1.09
PCSK4-201ENST00000300954 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
PCSK4-201ENST00000300954 LRP2P98164 4655 aa8.22□□□□□ -1.09
PCSK4-201ENST00000300954 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
PCSK4-201ENST00000300954 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
PCSK4-201ENST00000300954 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
PCSK4-201ENST00000300954 P0C880 135 aa8.05□□□□□ -1.12
PCSK4-201ENST00000300954 SEC61BP60468 96 aaKnown RBP7.97□□□□□ -1.13
PCSK4-201ENST00000300954 J3QL48 77 aa7.96□□□□□ -1.13
PCSK4-201ENST00000300954 K7ERS5 55 aa7.96□□□□□ -1.14
PCSK4-201ENST00000300954 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
PCSK4-201ENST00000300954 MUC17Q685J3 4493 aa7.94□□□□□ -1.14
PCSK4-201ENST00000300954 HERC2O95714 4834 aa7.93□□□□□ -1.14
PCSK4-201ENST00000300954 KRTAP4-1Q9BYQ7 146 aa7.93□□□□□ -1.14
PCSK4-201ENST00000300954 A0A0D9SG42 100 aa7.92□□□□□ -1.14
PCSK4-201ENST00000300954 CRIPTQ9P021 101 aa7.86□□□□□ -1.15
PCSK4-201ENST00000300954 ROMO1P60602 79 aa7.85□□□□□ -1.15
PCSK4-201ENST00000300954 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
PCSK4-201ENST00000300954 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
PCSK4-201ENST00000300954 M0QZ58 72 aa7.8□□□□□ -1.16
PCSK4-201ENST00000300954 KRTAP12-2P59991 146 aa7.79□□□□□ -1.16
PCSK4-201ENST00000300954 KRTAP12-1P59990 96 aa7.76□□□□□ -1.17
PCSK4-201ENST00000300954 SPINT4Q6UDR6 99 aa7.67□□□□□ -1.18
PCSK4-201ENST00000300954 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
PCSK4-201ENST00000300954 R4GN34 69 aa7.62□□□□□ -1.19
PCSK4-201ENST00000300954 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
PCSK4-201ENST00000300954 MUC2Q02817 5179 aa7.55□□□□□ -1.2
PCSK4-201ENST00000300954 HMCN2Q8NDA2 5059 aa7.52□□□□□ -1.21
PCSK4-201ENST00000300954 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
PCSK4-201ENST00000300954 HERC1Q15751 4861 aa7.52□□□□□ -1.21
PCSK4-201ENST00000300954 FLGP20930 4061 aaPredicted RBP7.5□□□□□ -1.21
PCSK4-201ENST00000300954 LCE2CQ5TA81 110 aa7.4□□□□□ -1.23
PCSK4-201ENST00000300954 NDUFAF8A1L188 74 aa7.36□□□□□ -1.23
PCSK4-201ENST00000300954 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
PCSK4-201ENST00000300954 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
PCSK4-201ENST00000300954 FAT4Q6V0I7 4981 aa7.2□□□□□ -1.26
PCSK4-201ENST00000300954 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
PCSK4-201ENST00000300954 MT1HP80294 61 aa7.18□□□□□ -1.26
PCSK4-201ENST00000300954 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
PCSK4-201ENST00000300954 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
PCSK4-201ENST00000300954 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
PCSK4-201ENST00000300954 M0R2T5 61 aa7.09□□□□□ -1.27
PCSK4-201ENST00000300954 KRTAP19-1Q8IUB9 90 aa7.09□□□□□ -1.27
PCSK4-201ENST00000300954 MT2AP02795 61 aa7.02□□□□□ -1.29
PCSK4-201ENST00000300954 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
PCSK4-201ENST00000300954 MT1FP04733 61 aa7.01□□□□□ -1.29
PCSK4-201ENST00000300954 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
PCSK4-201ENST00000300954 KRTAP10-10P60014 251 aa6.94□□□□□ -1.3
PCSK4-201ENST00000300954 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
PCSK4-201ENST00000300954 TNP1P09430 55 aa6.92□□□□□ -1.3
PCSK4-201ENST00000300954 LUZP6Q538Z0 58 aa6.92□□□□□ -1.3
PCSK4-201ENST00000300954 KRTAP23-1A1A580 65 aa6.86□□□□□ -1.31
PCSK4-201ENST00000300954 KRTAP19-8Q3LI54 63 aa6.84□□□□□ -1.31
PCSK4-201ENST00000300954 MT1BP07438 61 aa6.75□□□□□ -1.33
PCSK4-201ENST00000300954 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
PCSK4-201ENST00000300954 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
PCSK4-201ENST00000300954 MT1XP80297 61 aa6.65□□□□□ -1.35
PCSK4-201ENST00000300954 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
PCSK4-201ENST00000300954 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
PCSK4-201ENST00000300954 SPRR5A0A1B0GTR4 108 aa6.49□□□□□ -1.37
PCSK4-201ENST00000300954 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
PCSK4-201ENST00000300954 LCE2BO14633 110 aa6.47□□□□□ -1.37
PCSK4-201ENST00000300954 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
PCSK4-201ENST00000300954 KRTAP10-12P60413 245 aa6.42□□□□□ -1.38
PCSK4-201ENST00000300954 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
PCSK4-201ENST00000300954 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
PCSK4-201ENST00000300954 USH2AO75445 5202 aa6.2□□□□□ -1.42
PCSK4-201ENST00000300954 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
PCSK4-201ENST00000300954 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
PCSK4-201ENST00000300954 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
PCSK4-201ENST00000300954 KMT2DO14686 5537 aa6.01□□□□□ -1.45
PCSK4-201ENST00000300954 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
PCSK4-201ENST00000300954 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
PCSK4-201ENST00000300954 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
PCSK4-201ENST00000300954 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
PCSK4-201ENST00000300954 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
PCSK4-201ENST00000300954 INE1O15225 51 aa5.8□□□□□ -1.48
PCSK4-201ENST00000300954 MT1EP04732 61 aa5.77□□□□□ -1.49
PCSK4-201ENST00000300954 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
PCSK4-201ENST00000300954 MT1LQ93083 61 aa5.73□□□□□ -1.49
PCSK4-201ENST00000300954 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
PCSK4-201ENST00000300954 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
PCSK4-201ENST00000300954 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
PCSK4-201ENST00000300954 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
PCSK4-201ENST00000300954 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms