RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 SPANXA2-OT1Q8N9U9 137 aa8.68□□□□□ -1.02
TMED3-201ENST00000299705 NDUFC1O43677 76 aa8.67□□□□□ -1.02
TMED3-201ENST00000299705 TMEM258P61165 79 aa8.65□□□□□ -1.02
TMED3-201ENST00000299705 KRTAP9-2Q9BYQ4 174 aa8.63□□□□□ -1.03
TMED3-201ENST00000299705 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
TMED3-201ENST00000299705 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
TMED3-201ENST00000299705 ACYP2P14621 99 aa8.6□□□□□ -1.03
TMED3-201ENST00000299705 CYSTM1Q9H1C7 97 aa8.6□□□□□ -1.03
TMED3-201ENST00000299705 H7BZZ5 65 aa8.59□□□□□ -1.03
TMED3-201ENST00000299705 KRTAP9-8Q9BYQ0 159 aa8.59□□□□□ -1.03
TMED3-201ENST00000299705 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
TMED3-201ENST00000299705 MT2AP02795 61 aa8.51□□□□□ -1.05
TMED3-201ENST00000299705 MT1FP04733 61 aa8.44□□□□□ -1.06
TMED3-201ENST00000299705 CHKB-CPT1BH3BT56 60 aa8.42□□□□□ -1.06
TMED3-201ENST00000299705 KRTAP10-10P60014 251 aa8.42□□□□□ -1.06
TMED3-201ENST00000299705 ATP5EP56381 51 aaPredicted RBP8.41□□□□□ -1.06
TMED3-201ENST00000299705 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
TMED3-201ENST00000299705 H0YAA0 97 aa8.38□□□□□ -1.07
TMED3-201ENST00000299705 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
TMED3-201ENST00000299705 COA5Q86WW8 74 aa8.37□□□□□ -1.07
TMED3-201ENST00000299705 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
TMED3-201ENST00000299705 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
TMED3-201ENST00000299705 KRTAP9-6A0A140TA67 174 aa8.26□□□□□ -1.09
TMED3-201ENST00000299705 ADM2Q7Z4H4 148 aa8.26□□□□□ -1.09
TMED3-201ENST00000299705 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
TMED3-201ENST00000299705 CRCT1Q9UGL9 99 aa8.19□□□□□ -1.1
TMED3-201ENST00000299705 KRTAP3-2Q9BYR7 98 aa8.19□□□□□ -1.1
TMED3-201ENST00000299705 FSIP2Q5CZC0 6907 aa8.18□□□□□ -1.1
TMED3-201ENST00000299705 P0C880 135 aa8.15□□□□□ -1.1
TMED3-201ENST00000299705 LCE2BO14633 110 aa8.14□□□□□ -1.11
TMED3-201ENST00000299705 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
TMED3-201ENST00000299705 SPRR2GQ9BYE4 73 aa8.13□□□□□ -1.11
TMED3-201ENST00000299705 PRO0628Q9UI54 55 aa8.09□□□□□ -1.11
TMED3-201ENST00000299705 SEC61GP60059 68 aa8.04□□□□□ -1.12
TMED3-201ENST00000299705 R4GN34 69 aa8.02□□□□□ -1.13
TMED3-201ENST00000299705 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
TMED3-201ENST00000299705 M0QZ58 72 aa7.97□□□□□ -1.13
TMED3-201ENST00000299705 USH2AO75445 5202 aa7.96□□□□□ -1.14
TMED3-201ENST00000299705 Q1T7F1 81 aa7.95□□□□□ -1.14
TMED3-201ENST00000299705 V9GYY9 64 aa7.94□□□□□ -1.14
TMED3-201ENST00000299705 A0A1B0GU69 56 aa7.94□□□□□ -1.14
TMED3-201ENST00000299705 Q5VV11 94 aa7.93□□□□□ -1.14
TMED3-201ENST00000299705 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
TMED3-201ENST00000299705 MT1BP07438 61 aa7.9□□□□□ -1.14
TMED3-201ENST00000299705 A0A1B0GU33 70 aa7.86□□□□□ -1.15
TMED3-201ENST00000299705 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
TMED3-201ENST00000299705 SSPOA2VEC9 5147 aa7.84□□□□□ -1.15
TMED3-201ENST00000299705 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
TMED3-201ENST00000299705 LINC01554Q52M75 96 aa7.81□□□□□ -1.16
TMED3-201ENST00000299705 BRK1Q8WUW1 75 aa7.81□□□□□ -1.16
TMED3-201ENST00000299705 KRTAP19-6Q3LI70 58 aa7.79□□□□□ -1.16
TMED3-201ENST00000299705 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
TMED3-201ENST00000299705 A6NN06 94 aa7.73□□□□□ -1.17
TMED3-201ENST00000299705 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
TMED3-201ENST00000299705 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
TMED3-201ENST00000299705 UQCR11O14957 56 aa7.62□□□□□ -1.19
TMED3-201ENST00000299705 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
TMED3-201ENST00000299705 A0A0D9SG42 100 aa7.62□□□□□ -1.19
TMED3-201ENST00000299705 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.62□□□□□ -1.19
TMED3-201ENST00000299705 PSPHP1O15172 72 aa7.62□□□□□ -1.19
TMED3-201ENST00000299705 PMAIP1Q13794 54 aa7.55□□□□□ -1.2
TMED3-201ENST00000299705 A8MU10 97 aa7.54□□□□□ -1.2
TMED3-201ENST00000299705 PRO2289Q9P1D8 64 aa7.54□□□□□ -1.2
TMED3-201ENST00000299705 MT1XP80297 61 aa7.53□□□□□ -1.2
TMED3-201ENST00000299705 KRTAP12-1P59990 96 aa7.52□□□□□ -1.21
TMED3-201ENST00000299705 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
TMED3-201ENST00000299705 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
TMED3-201ENST00000299705 CDC42SE1Q9NRR8 79 aa7.49□□□□□ -1.21
TMED3-201ENST00000299705 KRTAP9-7A8MTY7 169 aa7.46□□□□□ -1.22
TMED3-201ENST00000299705 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
TMED3-201ENST00000299705 CAMK2N1Q7Z7J9 78 aa7.45□□□□□ -1.22
TMED3-201ENST00000299705 A6NED7 52 aa7.44□□□□□ -1.22
TMED3-201ENST00000299705 KTN1-AS1Q86SY8 53 aa7.38□□□□□ -1.23
TMED3-201ENST00000299705 MACF1Q9UPN3 7388 aaKnown RBP7.38□□□□□ -1.23
TMED3-201ENST00000299705 SYNE2Q8WXH0 6885 aaKnown RBP7.3□□□□□ -1.24
TMED3-201ENST00000299705 K7ERS5 55 aa7.24□□□□□ -1.25
TMED3-201ENST00000299705 KRTAP6-3Q3LI67 103 aa7.22□□□□□ -1.25
TMED3-201ENST00000299705 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
TMED3-201ENST00000299705 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
TMED3-201ENST00000299705 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
TMED3-201ENST00000299705 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
TMED3-201ENST00000299705 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
TMED3-201ENST00000299705 TNP1P09430 55 aa7.02□□□□□ -1.29
TMED3-201ENST00000299705 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
TMED3-201ENST00000299705 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
TMED3-201ENST00000299705 KMT2DO14686 5537 aa6.97□□□□□ -1.29
TMED3-201ENST00000299705 KRTAP25-1Q3LHN0 102 aa6.9□□□□□ -1.31
TMED3-201ENST00000299705 NEBP20929 6669 aa6.86□□□□□ -1.31
TMED3-201ENST00000299705 ROMO1P60602 79 aa6.85□□□□□ -1.31
TMED3-201ENST00000299705 SPRR2FQ96RM1 72 aa6.84□□□□□ -1.31
TMED3-201ENST00000299705 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
TMED3-201ENST00000299705 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
TMED3-201ENST00000299705 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
TMED3-201ENST00000299705 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
TMED3-201ENST00000299705 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
TMED3-201ENST00000299705 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
TMED3-201ENST00000299705 MDN1Q9NU22 5596 aa6.67□□□□□ -1.34
TMED3-201ENST00000299705 MT1EP04732 61 aa6.64□□□□□ -1.35
TMED3-201ENST00000299705 SPRR2EP22531 72 aa6.63□□□□□ -1.35
TMED3-201ENST00000299705 SPRR2BP35325 72 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms