RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 PRAC1Q96KF2 57 aa5.81□□□□□ -1.48
IDH3A-201ENST00000299518 UQCR11O14957 56 aa5.8□□□□□ -1.48
IDH3A-201ENST00000299518 XP32Q5T750 250 aa5.8□□□□□ -1.48
IDH3A-201ENST00000299518 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
IDH3A-201ENST00000299518 KTN1-AS1Q86SY8 53 aa5.78□□□□□ -1.48
IDH3A-201ENST00000299518 H0YAA0 97 aa5.76□□□□□ -1.49
IDH3A-201ENST00000299518 COX6B2Q6YFQ2 88 aa5.76□□□□□ -1.49
IDH3A-201ENST00000299518 MUC2Q02817 5179 aa5.75□□□□□ -1.49
IDH3A-201ENST00000299518 SEC61GP60059 68 aa5.75□□□□□ -1.49
IDH3A-201ENST00000299518 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
IDH3A-201ENST00000299518 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.5
IDH3A-201ENST00000299518 RBM12B-AS1Q9P1G2 102 aa5.69□□□□□ -1.5
IDH3A-201ENST00000299518 A0A1B0GU33 70 aa5.69□□□□□ -1.5
IDH3A-201ENST00000299518 HERC2O95714 4834 aa5.69□□□□□ -1.5
IDH3A-201ENST00000299518 H1FX-AS1Q4G0G2 97 aa5.65□□□□□ -1.51
IDH3A-201ENST00000299518 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
IDH3A-201ENST00000299518 A0A0D9SG42 100 aa5.62□□□□□ -1.51
IDH3A-201ENST00000299518 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
IDH3A-201ENST00000299518 P0C880 135 aa5.6□□□□□ -1.51
IDH3A-201ENST00000299518 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
IDH3A-201ENST00000299518 J3QL48 77 aa5.59□□□□□ -1.51
IDH3A-201ENST00000299518 S4R3F8 94 aa5.59□□□□□ -1.51
IDH3A-201ENST00000299518 HERC1Q15751 4861 aa5.58□□□□□ -1.52
IDH3A-201ENST00000299518 KRTAP3-2Q9BYR7 98 aa5.58□□□□□ -1.52
IDH3A-201ENST00000299518 CSAG1Q6PB30 78 aa5.57□□□□□ -1.52
IDH3A-201ENST00000299518 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
IDH3A-201ENST00000299518 TPRXLQ17RH7 258 aa5.5□□□□□ -1.53
IDH3A-201ENST00000299518 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
IDH3A-201ENST00000299518 KRTAP4-1Q9BYQ7 146 aa5.49□□□□□ -1.53
IDH3A-201ENST00000299518 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
IDH3A-201ENST00000299518 H3BS24 57 aa5.43□□□□□ -1.54
IDH3A-201ENST00000299518 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
IDH3A-201ENST00000299518 BIRC6Q9NR09 4857 aa5.4□□□□□ -1.55
IDH3A-201ENST00000299518 RNF213Q63HN8 5207 aa5.39□□□□□ -1.55
IDH3A-201ENST00000299518 SPINT4Q6UDR6 99 aa5.38□□□□□ -1.55
IDH3A-201ENST00000299518 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
IDH3A-201ENST00000299518 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
IDH3A-201ENST00000299518 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
IDH3A-201ENST00000299518 K7ERS5 55 aa5.35□□□□□ -1.55
IDH3A-201ENST00000299518 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
IDH3A-201ENST00000299518 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
IDH3A-201ENST00000299518 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
IDH3A-201ENST00000299518 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
IDH3A-201ENST00000299518 ROMO1P60602 79 aa5.29□□□□□ -1.56
IDH3A-201ENST00000299518 HMCN2Q8NDA2 5059 aa5.29□□□□□ -1.56
IDH3A-201ENST00000299518 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
IDH3A-201ENST00000299518 M0QZ58 72 aa5.28□□□□□ -1.56
IDH3A-201ENST00000299518 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
IDH3A-201ENST00000299518 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
IDH3A-201ENST00000299518 R4GN34 69 aa5.22□□□□□ -1.57
IDH3A-201ENST00000299518 LCE2CQ5TA81 110 aa5.01□□□□□ -1.61
IDH3A-201ENST00000299518 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
IDH3A-201ENST00000299518 M0R2T5 61 aa4.94□□□□□ -1.62
IDH3A-201ENST00000299518 MT1HP80294 61 aa4.87□□□□□ -1.63
IDH3A-201ENST00000299518 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
IDH3A-201ENST00000299518 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
IDH3A-201ENST00000299518 MT1FP04733 61 aa4.81□□□□□ -1.64
IDH3A-201ENST00000299518 USH2AO75445 5202 aa4.81□□□□□ -1.64
IDH3A-201ENST00000299518 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
IDH3A-201ENST00000299518 NDUFAF8A1L188 74 aa4.78□□□□□ -1.64
IDH3A-201ENST00000299518 MT2AP02795 61 aa4.77□□□□□ -1.65
IDH3A-201ENST00000299518 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
IDH3A-201ENST00000299518 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
IDH3A-201ENST00000299518 PLAC4Q8WY50 150 aa4.7□□□□□ -1.66
IDH3A-201ENST00000299518 TNP1P09430 55 aa4.67□□□□□ -1.66
IDH3A-201ENST00000299518 KMT2DO14686 5537 aa4.66□□□□□ -1.66
IDH3A-201ENST00000299518 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
IDH3A-201ENST00000299518 MT1BP07438 61 aa4.58□□□□□ -1.68
IDH3A-201ENST00000299518 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
IDH3A-201ENST00000299518 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
IDH3A-201ENST00000299518 KRTAP10-5P60370 271 aa4.53□□□□□ -1.68
IDH3A-201ENST00000299518 MT1XP80297 61 aa4.53□□□□□ -1.68
IDH3A-201ENST00000299518 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
IDH3A-201ENST00000299518 KRTAP19-8Q3LI54 63 aa4.5□□□□□ -1.69
IDH3A-201ENST00000299518 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
IDH3A-201ENST00000299518 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
IDH3A-201ENST00000299518 LCE2BO14633 110 aa4.45□□□□□ -1.7
IDH3A-201ENST00000299518 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
IDH3A-201ENST00000299518 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
IDH3A-201ENST00000299518 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
IDH3A-201ENST00000299518 LCE2AQ5TA79 106 aaPredicted RBP4.35□□□□□ -1.71
IDH3A-201ENST00000299518 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
IDH3A-201ENST00000299518 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
IDH3A-201ENST00000299518 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
IDH3A-201ENST00000299518 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
IDH3A-201ENST00000299518 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
IDH3A-201ENST00000299518 SSPOA2VEC9 5147 aa4.28□□□□□ -1.72
IDH3A-201ENST00000299518 KRTAP19-5Q3LI72 72 aa4.22□□□□□ -1.73
IDH3A-201ENST00000299518 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
IDH3A-201ENST00000299518 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
IDH3A-201ENST00000299518 MUC12Q9UKN1 5478 aa4.11□□□□□ -1.75
IDH3A-201ENST00000299518 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
IDH3A-201ENST00000299518 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
IDH3A-201ENST00000299518 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
IDH3A-201ENST00000299518 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
IDH3A-201ENST00000299518 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
IDH3A-201ENST00000299518 MACF1Q9UPN3 7388 aaKnown RBP3.91□□□□□ -1.78
IDH3A-201ENST00000299518 MT1EP04732 61 aa3.89□□□□□ -1.79
IDH3A-201ENST00000299518 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
IDH3A-201ENST00000299518 MT1LQ93083 61 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms