RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 ALMS1Q8TCU4 4167 aa5.44□□□□□ -1.54
PLXNB1-201ENST00000296440 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
PLXNB1-201ENST00000296440 CSMD3Q7Z407 3707 aa5.41□□□□□ -1.54
PLXNB1-201ENST00000296440 SPRR2EP22531 72 aa5.41□□□□□ -1.54
PLXNB1-201ENST00000296440 SPRR2BP35325 72 aa5.41□□□□□ -1.54
PLXNB1-201ENST00000296440 SPRR2AP35326 72 aa5.41□□□□□ -1.54
PLXNB1-201ENST00000296440 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
PLXNB1-201ENST00000296440 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
PLXNB1-201ENST00000296440 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
PLXNB1-201ENST00000296440 MT1HP80294 61 aa5.33□□□□□ -1.56
PLXNB1-201ENST00000296440 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
PLXNB1-201ENST00000296440 SPRR2DP22532 72 aa5.24□□□□□ -1.57
PLXNB1-201ENST00000296440 ZNF469Q96JG9 3925 aaPredicted RBP5.18□□□□□ -1.58
PLXNB1-201ENST00000296440 MT2AP02795 61 aa5.13□□□□□ -1.59
PLXNB1-201ENST00000296440 DNAH9Q9NYC9 4486 aa5.12□□□□□ -1.59
PLXNB1-201ENST00000296440 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
PLXNB1-201ENST00000296440 LCE2BO14633 110 aa5.1□□□□□ -1.59
PLXNB1-201ENST00000296440 DNAH1Q9P2D7 4330 aa5.1□□□□□ -1.59
PLXNB1-201ENST00000296440 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
PLXNB1-201ENST00000296440 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PLXNB1-201ENST00000296440 MT1FP04733 61 aa5□□□□□ -1.61
PLXNB1-201ENST00000296440 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
PLXNB1-201ENST00000296440 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
PLXNB1-201ENST00000296440 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
PLXNB1-201ENST00000296440 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
PLXNB1-201ENST00000296440 SPRR5A0A1B0GTR4 108 aa4.91□□□□□ -1.62
PLXNB1-201ENST00000296440 LCE2CQ5TA81 110 aa4.89□□□□□ -1.63
PLXNB1-201ENST00000296440 DNAH10Q8IVF4 4471 aa4.87□□□□□ -1.63
PLXNB1-201ENST00000296440 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
PLXNB1-201ENST00000296440 DNAH2Q9P225 4427 aa4.85□□□□□ -1.63
PLXNB1-201ENST00000296440 PLECQ15149 4684 aaKnown RBP4.84□□□□□ -1.63
PLXNB1-201ENST00000296440 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
PLXNB1-201ENST00000296440 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
PLXNB1-201ENST00000296440 MT1GP13640 62 aa4.78□□□□□ -1.64
PLXNB1-201ENST00000296440 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
PLXNB1-201ENST00000296440 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
PLXNB1-201ENST00000296440 ANK2Q01484 3957 aa4.75□□□□□ -1.65
PLXNB1-201ENST00000296440 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
PLXNB1-201ENST00000296440 KMT2AQ03164 3969 aa4.74□□□□□ -1.65
PLXNB1-201ENST00000296440 VPS13DQ5THJ4 4388 aa4.73□□□□□ -1.65
PLXNB1-201ENST00000296440 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
PLXNB1-201ENST00000296440 LRP1BQ9NZR2 4599 aa4.71□□□□□ -1.65
PLXNB1-201ENST00000296440 KRTAP19-1Q8IUB9 90 aa4.71□□□□□ -1.66
PLXNB1-201ENST00000296440 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
PLXNB1-201ENST00000296440 STARD9Q9P2P6 4700 aa4.7□□□□□ -1.66
PLXNB1-201ENST00000296440 MT4P47944 62 aa4.69□□□□□ -1.66
PLXNB1-201ENST00000296440 DNHD1Q96M86 4753 aa4.69□□□□□ -1.66
PLXNB1-201ENST00000296440 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
PLXNB1-201ENST00000296440 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
PLXNB1-201ENST00000296440 DYNC2H1Q8NCM8 4307 aaKnown RBP4.66□□□□□ -1.66
PLXNB1-201ENST00000296440 FAT1Q14517 4588 aa4.61□□□□□ -1.67
PLXNB1-201ENST00000296440 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
PLXNB1-201ENST00000296440 LYSTQ99698 3801 aa4.6□□□□□ -1.67
PLXNB1-201ENST00000296440 CMYA5Q8N3K9 4069 aa4.58□□□□□ -1.68
PLXNB1-201ENST00000296440 DNAH7Q8WXX0 4024 aa4.57□□□□□ -1.68
PLXNB1-201ENST00000296440 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
PLXNB1-201ENST00000296440 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
PLXNB1-201ENST00000296440 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
PLXNB1-201ENST00000296440 RYR1P21817 5038 aa4.51□□□□□ -1.69
PLXNB1-201ENST00000296440 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
PLXNB1-201ENST00000296440 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
PLXNB1-201ENST00000296440 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
PLXNB1-201ENST00000296440 KRTAP4-8Q9BYQ9 185 aa4.48□□□□□ -1.69
PLXNB1-201ENST00000296440 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
PLXNB1-201ENST00000296440 DNAH6Q9C0G6 4158 aa4.46□□□□□ -1.69
PLXNB1-201ENST00000296440 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
PLXNB1-201ENST00000296440 MT1XP80297 61 aa4.43□□□□□ -1.7
PLXNB1-201ENST00000296440 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
PLXNB1-201ENST00000296440 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
PLXNB1-201ENST00000296440 APOBP04114 4563 aaKnown RBP4.4□□□□□ -1.71
PLXNB1-201ENST00000296440 KRTAP20-1Q3LI63 56 aa4.39□□□□□ -1.71
PLXNB1-201ENST00000296440 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
PLXNB1-201ENST00000296440 FAT3Q8TDW7 4589 aa4.35□□□□□ -1.71
PLXNB1-201ENST00000296440 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.72
PLXNB1-201ENST00000296440 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
PLXNB1-201ENST00000296440 MT1BP07438 61 aa4.31□□□□□ -1.72
PLXNB1-201ENST00000296440 RYR3Q15413 4870 aa4.3□□□□□ -1.72
PLXNB1-201ENST00000296440 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
PLXNB1-201ENST00000296440 MT3P25713 68 aa4.29□□□□□ -1.72
PLXNB1-201ENST00000296440 LRP1Q07954 4544 aaKnown RBP4.28□□□□□ -1.72
PLXNB1-201ENST00000296440 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
PLXNB1-201ENST00000296440 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
PLXNB1-201ENST00000296440 HSPG2P98160 4391 aa4.24□□□□□ -1.73
PLXNB1-201ENST00000296440 MYCBP2O75592 4640 aa4.23□□□□□ -1.73
PLXNB1-201ENST00000296440 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
PLXNB1-201ENST00000296440 LPAP08519 4548 aa4.16□□□□□ -1.74
PLXNB1-201ENST00000296440 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
PLXNB1-201ENST00000296440 MT1LQ93083 61 aa4.13□□□□□ -1.75
PLXNB1-201ENST00000296440 PKHD1P08F94 4074 aa4.12□□□□□ -1.75
PLXNB1-201ENST00000296440 KRTAP4-7Q9BYR0 210 aa4.12□□□□□ -1.75
PLXNB1-201ENST00000296440 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
PLXNB1-201ENST00000296440 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
PLXNB1-201ENST00000296440 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
PLXNB1-201ENST00000296440 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
PLXNB1-201ENST00000296440 MT1EP04732 61 aa4.08□□□□□ -1.76
PLXNB1-201ENST00000296440 PKD1P98161 4303 aa4.07□□□□□ -1.76
PLXNB1-201ENST00000296440 MT1MQ8N339 61 aa4.04□□□□□ -1.76
PLXNB1-201ENST00000296440 PRM1P04553 51 aa4.04□□□□□ -1.76
PLXNB1-201ENST00000296440 KRTAP2-3P0C7H8 128 aa4.02□□□□□ -1.77
PLXNB1-201ENST00000296440 KRTAP2-4Q9BYR9 128 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms