RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 MT2AP02795 61 aa10.74□□□□□ -0.69
LINC01116-201ENST00000295549 SPANXA2-OT1Q8N9U9 137 aa10.68□□□□□ -0.7
LINC01116-201ENST00000295549 NDUFC1O43677 76 aa10.67□□□□□ -0.7
LINC01116-201ENST00000295549 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
LINC01116-201ENST00000295549 MT1FP04733 61 aa10.66□□□□□ -0.7
LINC01116-201ENST00000295549 ACYP2P14621 99 aa10.63□□□□□ -0.71
LINC01116-201ENST00000295549 KRTAP10-10P60014 251 aa10.62□□□□□ -0.71
LINC01116-201ENST00000295549 KRTAP9-6A0A140TA67 174 aa10.56□□□□□ -0.72
LINC01116-201ENST00000295549 H7BZZ5 65 aa10.55□□□□□ -0.72
LINC01116-201ENST00000295549 CYSTM1Q9H1C7 97 aa10.55□□□□□ -0.72
LINC01116-201ENST00000295549 CCDC179H3BU77 68 aa10.5□□□□□ -0.73
LINC01116-201ENST00000295549 KRTAP9-3Q9BYQ3 159 aa10.5□□□□□ -0.73
LINC01116-201ENST00000295549 H0YAA0 97 aa10.45□□□□□ -0.74
LINC01116-201ENST00000295549 CHKB-CPT1BH3BT56 60 aa10.41□□□□□ -0.74
LINC01116-201ENST00000295549 SPTSSBQ8NFR3 76 aa10.39□□□□□ -0.75
LINC01116-201ENST00000295549 FSIP2Q5CZC0 6907 aa10.33□□□□□ -0.76
LINC01116-201ENST00000295549 COA5Q86WW8 74 aa10.32□□□□□ -0.76
LINC01116-201ENST00000295549 ADM2Q7Z4H4 148 aa10.31□□□□□ -0.76
LINC01116-201ENST00000295549 LCE2BO14633 110 aa10.3□□□□□ -0.76
LINC01116-201ENST00000295549 CRCT1Q9UGL9 99 aa10.27□□□□□ -0.77
LINC01116-201ENST00000295549 CRIPTQ9P021 101 aa10.25□□□□□ -0.77
LINC01116-201ENST00000295549 USH2AO75445 5202 aa10.25□□□□□ -0.77
LINC01116-201ENST00000295549 KRTAP19-1Q8IUB9 90 aa10.23□□□□□ -0.77
LINC01116-201ENST00000295549 ATP5EP56381 51 aaPredicted RBP10.22□□□□□ -0.77
LINC01116-201ENST00000295549 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
LINC01116-201ENST00000295549 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
LINC01116-201ENST00000295549 TMEM258P61165 79 aa10.16□□□□□ -0.78
LINC01116-201ENST00000295549 P0C880 135 aa10.16□□□□□ -0.78
LINC01116-201ENST00000295549 PCP4P48539 62 aa10.06□□□□□ -0.8
LINC01116-201ENST00000295549 SSPOA2VEC9 5147 aa10.03□□□□□ -0.8
LINC01116-201ENST00000295549 KRTAP19-8Q3LI54 63 aa10.03□□□□□ -0.8
LINC01116-201ENST00000295549 R4GN34 69 aa10.01□□□□□ -0.81
LINC01116-201ENST00000295549 Q5VV11 94 aa9.97□□□□□ -0.81
LINC01116-201ENST00000295549 M0QZ58 72 aa9.94□□□□□ -0.82
LINC01116-201ENST00000295549 MT1BP07438 61 aa9.94□□□□□ -0.82
LINC01116-201ENST00000295549 SEC61GP60059 68 aa9.93□□□□□ -0.82
LINC01116-201ENST00000295549 SERP1Q9Y6X1 66 aa9.89□□□□□ -0.83
LINC01116-201ENST00000295549 KRTAP19-6Q3LI70 58 aa9.86□□□□□ -0.83
LINC01116-201ENST00000295549 A0A1B0GU69 56 aa9.77□□□□□ -0.85
LINC01116-201ENST00000295549 LINC01554Q52M75 96 aa9.75□□□□□ -0.85
LINC01116-201ENST00000295549 FCGBPQ9Y6R7 5405 aaPredicted RBP9.74□□□□□ -0.85
LINC01116-201ENST00000295549 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
LINC01116-201ENST00000295549 LINC01558Q9Y6Z2 57 aa9.72□□□□□ -0.85
LINC01116-201ENST00000295549 A0A1B0GU33 70 aa9.71□□□□□ -0.86
LINC01116-201ENST00000295549 PLAC4Q8WY50 150 aa9.69□□□□□ -0.86
LINC01116-201ENST00000295549 PRR15LQ9BU68 103 aa9.66□□□□□ -0.86
LINC01116-201ENST00000295549 A6NN06 94 aa9.63□□□□□ -0.87
LINC01116-201ENST00000295549 KRTAP10-5P60370 271 aa9.6□□□□□ -0.87
LINC01116-201ENST00000295549 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
LINC01116-201ENST00000295549 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
LINC01116-201ENST00000295549 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
LINC01116-201ENST00000295549 V9GYY9 64 aa9.51□□□□□ -0.89
LINC01116-201ENST00000295549 SMIM26A0A096LP01 95 aa9.48□□□□□ -0.89
LINC01116-201ENST00000295549 KRTAP9-7A8MTY7 169 aa9.48□□□□□ -0.89
LINC01116-201ENST00000295549 Q1T7F1 81 aa9.48□□□□□ -0.89
LINC01116-201ENST00000295549 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
LINC01116-201ENST00000295549 A0A0D9SG42 100 aa9.47□□□□□ -0.89
LINC01116-201ENST00000295549 MT1XP80297 61 aa9.47□□□□□ -0.89
LINC01116-201ENST00000295549 UQCR11O14957 56 aa9.37□□□□□ -0.91
LINC01116-201ENST00000295549 PSPHP1O15172 72 aa9.33□□□□□ -0.92
LINC01116-201ENST00000295549 A8MU10 97 aa9.32□□□□□ -0.92
LINC01116-201ENST00000295549 KRTAP12-1P59990 96 aa9.31□□□□□ -0.92
LINC01116-201ENST00000295549 SPINT4Q6UDR6 99 aa9.3□□□□□ -0.92
LINC01116-201ENST00000295549 MACF1Q9UPN3 7388 aaKnown RBP9.28□□□□□ -0.92
LINC01116-201ENST00000295549 CAMK2N1Q7Z7J9 78 aa9.28□□□□□ -0.92
LINC01116-201ENST00000295549 KRTAP12-2P59991 146 aa9.25□□□□□ -0.93
LINC01116-201ENST00000295549 SYNE2Q8WXH0 6885 aaKnown RBP9.19□□□□□ -0.94
LINC01116-201ENST00000295549 MIR22HGQ0VDD5 57 aa9.19□□□□□ -0.94
LINC01116-201ENST00000295549 A6NED7 52 aa9.05□□□□□ -0.96
LINC01116-201ENST00000295549 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
LINC01116-201ENST00000295549 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
LINC01116-201ENST00000295549 KRTAP6-3Q3LI67 103 aa8.99□□□□□ -0.97
LINC01116-201ENST00000295549 KMT2DO14686 5537 aa8.99□□□□□ -0.97
LINC01116-201ENST00000295549 K7ERS5 55 aa8.91□□□□□ -0.98
LINC01116-201ENST00000295549 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
LINC01116-201ENST00000295549 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
LINC01116-201ENST00000295549 C10orf95Q9H7T3 257 aa8.86□□□□□ -0.99
LINC01116-201ENST00000295549 KRTAP5-9P26371 169 aa8.83□□□□□ -1
LINC01116-201ENST00000295549 KRTAP8-1Q8IUC2 63 aa8.83□□□□□ -1
LINC01116-201ENST00000295549 CDC42SE1Q9NRR8 79 aa8.8□□□□□ -1
LINC01116-201ENST00000295549 TNP1P09430 55 aa8.72□□□□□ -1.01
LINC01116-201ENST00000295549 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
LINC01116-201ENST00000295549 NEBP20929 6669 aa8.67□□□□□ -1.02
LINC01116-201ENST00000295549 SPRR2FQ96RM1 72 aa8.67□□□□□ -1.02
LINC01116-201ENST00000295549 MDN1Q9NU22 5596 aa8.57□□□□□ -1.04
LINC01116-201ENST00000295549 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
LINC01116-201ENST00000295549 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
LINC01116-201ENST00000295549 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
LINC01116-201ENST00000295549 ROMO1P60602 79 aa8.42□□□□□ -1.06
LINC01116-201ENST00000295549 BRK1Q8WUW1 75 aa8.41□□□□□ -1.06
LINC01116-201ENST00000295549 SPRR2EP22531 72 aa8.39□□□□□ -1.07
LINC01116-201ENST00000295549 SPRR2BP35325 72 aa8.39□□□□□ -1.07
LINC01116-201ENST00000295549 SPRR2AP35326 72 aa8.39□□□□□ -1.07
LINC01116-201ENST00000295549 LCE1AQ5T7P2 110 aa8.39□□□□□ -1.07
LINC01116-201ENST00000295549 KRTAP19-5Q3LI72 72 aa8.37□□□□□ -1.07
LINC01116-201ENST00000295549 MT1EP04732 61 aa8.35□□□□□ -1.07
LINC01116-201ENST00000295549 KRTAP20-1Q3LI63 56 aa8.29□□□□□ -1.08
LINC01116-201ENST00000295549 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
LINC01116-201ENST00000295549 KRTAP12-3P60328 96 aa8.17□□□□□ -1.1
LINC01116-201ENST00000295549 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms