RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 KRTAP13-4Q3LI77 160 aa10.43□□□□□ -0.74
TMED4-201ENST00000289577 TNXBP22105 4242 aa10.43□□□□□ -0.74
TMED4-201ENST00000289577 H3BS24 57 aa10.42□□□□□ -0.74
TMED4-201ENST00000289577 LRP1Q07954 4544 aaKnown RBP10.37□□□□□ -0.75
TMED4-201ENST00000289577 KRTAP10-8P60410 259 aa10.36□□□□□ -0.75
TMED4-201ENST00000289577 HSPG2P98160 4391 aa10.36□□□□□ -0.75
TMED4-201ENST00000289577 S4R3F8 94 aa10.34□□□□□ -0.75
TMED4-201ENST00000289577 A0A0D9SG42 100 aa10.31□□□□□ -0.76
TMED4-201ENST00000289577 XP32Q5T750 250 aa10.3□□□□□ -0.76
TMED4-201ENST00000289577 DMBT1Q9UGM3 2413 aaPredicted RBP10.3□□□□□ -0.76
TMED4-201ENST00000289577 RYR2Q92736 4967 aa10.28□□□□□ -0.76
TMED4-201ENST00000289577 KRTAP21-3Q3LHN1 58 aa10.25□□□□□ -0.77
TMED4-201ENST00000289577 P0C880 135 aa10.25□□□□□ -0.77
TMED4-201ENST00000289577 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
TMED4-201ENST00000289577 MYCBP2O75592 4640 aa10.13□□□□□ -0.79
TMED4-201ENST00000289577 Q5VSD8 79 aa10.11□□□□□ -0.79
TMED4-201ENST00000289577 KRTAP12-2P59991 146 aa10.11□□□□□ -0.79
TMED4-201ENST00000289577 C10orf95Q9H7T3 257 aa10.06□□□□□ -0.8
TMED4-201ENST00000289577 KRTAP12-1P59990 96 aa10.04□□□□□ -0.8
TMED4-201ENST00000289577 KMT2CQ8NEZ4 4911 aaKnown RBP10.03□□□□□ -0.8
TMED4-201ENST00000289577 SPINT4Q6UDR6 99 aa10.01□□□□□ -0.81
TMED4-201ENST00000289577 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
TMED4-201ENST00000289577 RYR1P21817 5038 aa9.95□□□□□ -0.82
TMED4-201ENST00000289577 M0QZ58 72 aa9.94□□□□□ -0.82
TMED4-201ENST00000289577 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
TMED4-201ENST00000289577 LPAP08519 4548 aa9.9□□□□□ -0.82
TMED4-201ENST00000289577 KRTAP15-1Q3LI76 137 aa9.88□□□□□ -0.83
TMED4-201ENST00000289577 LRP2P98164 4655 aa9.8□□□□□ -0.84
TMED4-201ENST00000289577 RYR3Q15413 4870 aa9.69□□□□□ -0.86
TMED4-201ENST00000289577 KIAA1109Q2LD37 5005 aa9.66□□□□□ -0.86
TMED4-201ENST00000289577 NDUFAF8A1L188 74 aa9.66□□□□□ -0.86
TMED4-201ENST00000289577 R4GN34 69 aa9.59□□□□□ -0.87
TMED4-201ENST00000289577 MUC17Q685J3 4493 aa9.47□□□□□ -0.89
TMED4-201ENST00000289577 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
TMED4-201ENST00000289577 ABCA13Q86UQ4 5058 aa9.45□□□□□ -0.9
TMED4-201ENST00000289577 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
TMED4-201ENST00000289577 KRTAP4-1Q9BYQ7 146 aa9.33□□□□□ -0.92
TMED4-201ENST00000289577 PLAC4Q8WY50 150 aa9.31□□□□□ -0.92
TMED4-201ENST00000289577 EPPK1P58107 5090 aaKnown RBP9.3□□□□□ -0.92
TMED4-201ENST00000289577 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
TMED4-201ENST00000289577 KRTAP19-2Q3LHN2 52 aa9.26□□□□□ -0.93
TMED4-201ENST00000289577 PP632Q6XCG6 107 aa9.19□□□□□ -0.94
TMED4-201ENST00000289577 CAMK2N1Q7Z7J9 78 aa9.12□□□□□ -0.95
TMED4-201ENST00000289577 J3QL48 77 aa8.97□□□□□ -0.97
TMED4-201ENST00000289577 FLGP20930 4061 aaPredicted RBP8.97□□□□□ -0.97
TMED4-201ENST00000289577 LUZP6Q538Z0 58 aa8.9□□□□□ -0.98
TMED4-201ENST00000289577 HERC1Q15751 4861 aa8.9□□□□□ -0.99
TMED4-201ENST00000289577 KRTAP23-1A1A580 65 aa8.87□□□□□ -0.99
TMED4-201ENST00000289577 HERC2O95714 4834 aa8.86□□□□□ -0.99
TMED4-201ENST00000289577 TNP1P09430 55 aa8.85□□□□□ -0.99
TMED4-201ENST00000289577 BIRC6Q9NR09 4857 aa8.82□□□□□ -1
TMED4-201ENST00000289577 MUC2Q02817 5179 aa8.78□□□□□ -1
TMED4-201ENST00000289577 SPRR5A0A1B0GTR4 108 aa8.71□□□□□ -1.02
TMED4-201ENST00000289577 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.03
TMED4-201ENST00000289577 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
TMED4-201ENST00000289577 SPRR2GQ9BYE4 73 aa8.6□□□□□ -1.03
TMED4-201ENST00000289577 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
TMED4-201ENST00000289577 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
TMED4-201ENST00000289577 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
TMED4-201ENST00000289577 FAT4Q6V0I7 4981 aa8.38□□□□□ -1.07
TMED4-201ENST00000289577 LCE3AQ5TA76 89 aa8.36□□□□□ -1.07
TMED4-201ENST00000289577 MT1HP80294 61 aa8.29□□□□□ -1.08
TMED4-201ENST00000289577 M0R2T5 61 aa8.27□□□□□ -1.09
TMED4-201ENST00000289577 MT1FP04733 61 aa8.24□□□□□ -1.09
TMED4-201ENST00000289577 MT2AP02795 61 aa8.23□□□□□ -1.09
TMED4-201ENST00000289577 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
TMED4-201ENST00000289577 KRTAP10-10P60014 251 aa8.19□□□□□ -1.1
TMED4-201ENST00000289577 KRTAP19-8Q3LI54 63 aa8.18□□□□□ -1.1
TMED4-201ENST00000289577 KRTAP9-8Q9BYQ0 159 aa8.16□□□□□ -1.1
TMED4-201ENST00000289577 UBR4Q5T4S7 5183 aa8.11□□□□□ -1.11
TMED4-201ENST00000289577 RNF213Q63HN8 5207 aa8.09□□□□□ -1.11
TMED4-201ENST00000289577 KRTAP10-5P60370 271 aa8.07□□□□□ -1.12
TMED4-201ENST00000289577 MT1XP80297 61 aa8.05□□□□□ -1.12
TMED4-201ENST00000289577 MT1BP07438 61 aa8.05□□□□□ -1.12
TMED4-201ENST00000289577 KRTAP12-3P60328 96 aa7.95□□□□□ -1.14
TMED4-201ENST00000289577 KRTAP10-12P60413 245 aa7.94□□□□□ -1.14
TMED4-201ENST00000289577 PRO2289Q9P1D8 64 aa7.86□□□□□ -1.15
TMED4-201ENST00000289577 INE1O15225 51 aa7.82□□□□□ -1.16
TMED4-201ENST00000289577 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
TMED4-201ENST00000289577 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
TMED4-201ENST00000289577 KRTAP19-5Q3LI72 72 aa7.54□□□□□ -1.2
TMED4-201ENST00000289577 LCE3CQ5T5A8 94 aa7.52□□□□□ -1.21
TMED4-201ENST00000289577 LCE2BO14633 110 aa7.44□□□□□ -1.22
TMED4-201ENST00000289577 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
TMED4-201ENST00000289577 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
TMED4-201ENST00000289577 KRTAP4-8Q9BYQ9 185 aa7.27□□□□□ -1.25
TMED4-201ENST00000289577 KMT2DO14686 5537 aa7.24□□□□□ -1.25
TMED4-201ENST00000289577 USH2AO75445 5202 aa7.18□□□□□ -1.26
TMED4-201ENST00000289577 KRTAP19-7Q3SYF9 63 aa7.17□□□□□ -1.26
TMED4-201ENST00000289577 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.27
TMED4-201ENST00000289577 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.27
TMED4-201ENST00000289577 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.27
TMED4-201ENST00000289577 LCE2AQ5TA79 106 aaPredicted RBP7.11□□□□□ -1.27
TMED4-201ENST00000289577 KRTAP19-4Q3LI73 84 aa7.09□□□□□ -1.27
TMED4-201ENST00000289577 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
TMED4-201ENST00000289577 MT1LQ93083 61 aa6.98□□□□□ -1.29
TMED4-201ENST00000289577 MT1EP04732 61 aa6.95□□□□□ -1.3
TMED4-201ENST00000289577 SSPOA2VEC9 5147 aa6.75□□□□□ -1.33
TMED4-201ENST00000289577 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
TMED4-201ENST00000289577 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms