RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 LCA10Q71F78 164 aa9.02□□□□□ -0.96
NIFK-201ENST00000285814 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
NIFK-201ENST00000285814 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
NIFK-201ENST00000285814 FLGP20930 4061 aaPredicted RBP8.95□□□□□ -0.98
NIFK-201ENST00000285814 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
NIFK-201ENST00000285814 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
NIFK-201ENST00000285814 FAT4Q6V0I7 4981 aa8.86□□□□□ -0.99
NIFK-201ENST00000285814 CSAG1Q6PB30 78 aa8.85□□□□□ -0.99
NIFK-201ENST00000285814 MT1HP80294 61 aa8.83□□□□□ -1
NIFK-201ENST00000285814 Q1T7F1 81 aa8.78□□□□□ -1
NIFK-201ENST00000285814 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1
NIFK-201ENST00000285814 V9GYY9 64 aa8.76□□□□□ -1.01
NIFK-201ENST00000285814 M0R2T5 61 aa8.7□□□□□ -1.02
NIFK-201ENST00000285814 H0YAA0 97 aa8.68□□□□□ -1.02
NIFK-201ENST00000285814 A0A1B0GU69 56 aa8.67□□□□□ -1.02
NIFK-201ENST00000285814 SEC61GP60059 68 aa8.65□□□□□ -1.03
NIFK-201ENST00000285814 PRR15LQ9BU68 103 aa8.64□□□□□ -1.03
NIFK-201ENST00000285814 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
NIFK-201ENST00000285814 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
NIFK-201ENST00000285814 PSPHP1O15172 72 aa8.61□□□□□ -1.03
NIFK-201ENST00000285814 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
NIFK-201ENST00000285814 KRTAP10-6P60371 365 aaPredicted RBP8.6□□□□□ -1.03
NIFK-201ENST00000285814 P0C880 135 aa8.57□□□□□ -1.04
NIFK-201ENST00000285814 Q5VV11 94 aa8.55□□□□□ -1.04
NIFK-201ENST00000285814 KRTAP9-8Q9BYQ0 159 aa8.5□□□□□ -1.05
NIFK-201ENST00000285814 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
NIFK-201ENST00000285814 A0A1B0GU33 70 aa8.46□□□□□ -1.06
NIFK-201ENST00000285814 MT2AP02795 61 aa8.45□□□□□ -1.06
NIFK-201ENST00000285814 MT1FP04733 61 aa8.4□□□□□ -1.07
NIFK-201ENST00000285814 UQCR11O14957 56 aa8.38□□□□□ -1.07
NIFK-201ENST00000285814 KRTAP10-10P60014 251 aa8.36□□□□□ -1.07
NIFK-201ENST00000285814 A6NED7 52 aa8.34□□□□□ -1.07
NIFK-201ENST00000285814 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
NIFK-201ENST00000285814 CRIPTQ9P021 101 aa8.34□□□□□ -1.07
NIFK-201ENST00000285814 M0QZ58 72 aa8.34□□□□□ -1.07
NIFK-201ENST00000285814 R4GN34 69 aa8.33□□□□□ -1.08
NIFK-201ENST00000285814 SPATA8Q6RVD6 105 aa8.32□□□□□ -1.08
NIFK-201ENST00000285814 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
NIFK-201ENST00000285814 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
NIFK-201ENST00000285814 KRTAP19-1Q8IUB9 90 aa8.2□□□□□ -1.1
NIFK-201ENST00000285814 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
NIFK-201ENST00000285814 KRTAP9-3Q9BYQ3 159 aa8.2□□□□□ -1.1
NIFK-201ENST00000285814 A8MU10 97 aa8.17□□□□□ -1.1
NIFK-201ENST00000285814 A0A0D9SG42 100 aa8.15□□□□□ -1.11
NIFK-201ENST00000285814 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
NIFK-201ENST00000285814 BRK1Q8WUW1 75 aa8.14□□□□□ -1.11
NIFK-201ENST00000285814 LCE2DQ5TA82 110 aaPredicted RBP8.08□□□□□ -1.12
NIFK-201ENST00000285814 A6NN06 94 aa8.05□□□□□ -1.12
NIFK-201ENST00000285814 KRTAP12-1P59990 96 aa8.03□□□□□ -1.12
NIFK-201ENST00000285814 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
NIFK-201ENST00000285814 LCE2BO14633 110 aa7.98□□□□□ -1.13
NIFK-201ENST00000285814 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
NIFK-201ENST00000285814 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.14
NIFK-201ENST00000285814 MT1BP07438 61 aa7.93□□□□□ -1.14
NIFK-201ENST00000285814 K7ERS5 55 aa7.92□□□□□ -1.14
NIFK-201ENST00000285814 PRO0628Q9UI54 55 aa7.89□□□□□ -1.15
NIFK-201ENST00000285814 PLAC4Q8WY50 150 aa7.87□□□□□ -1.15
NIFK-201ENST00000285814 USH2AO75445 5202 aa7.78□□□□□ -1.16
NIFK-201ENST00000285814 CAMK2N1Q7Z7J9 78 aa7.77□□□□□ -1.17
NIFK-201ENST00000285814 PMAIP1Q13794 54 aa7.69□□□□□ -1.18
NIFK-201ENST00000285814 MT1XP80297 61 aa7.64□□□□□ -1.19
NIFK-201ENST00000285814 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
NIFK-201ENST00000285814 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
NIFK-201ENST00000285814 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
NIFK-201ENST00000285814 ROMO1P60602 79 aa7.58□□□□□ -1.2
NIFK-201ENST00000285814 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
NIFK-201ENST00000285814 SSPOA2VEC9 5147 aa7.56□□□□□ -1.2
NIFK-201ENST00000285814 KRTAP19-6Q3LI70 58 aa7.55□□□□□ -1.2
NIFK-201ENST00000285814 FSIP2Q5CZC0 6907 aa7.5□□□□□ -1.21
NIFK-201ENST00000285814 TNP1P09430 55 aa7.38□□□□□ -1.23
NIFK-201ENST00000285814 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
NIFK-201ENST00000285814 KTN1-AS1Q86SY8 53 aa7.34□□□□□ -1.23
NIFK-201ENST00000285814 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
NIFK-201ENST00000285814 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
NIFK-201ENST00000285814 FCGBPQ9Y6R7 5405 aaPredicted RBP7.27□□□□□ -1.25
NIFK-201ENST00000285814 KRTAP10-12P60413 245 aa7.24□□□□□ -1.25
NIFK-201ENST00000285814 PRAC1Q96KF2 57 aa7.22□□□□□ -1.25
NIFK-201ENST00000285814 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
NIFK-201ENST00000285814 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
NIFK-201ENST00000285814 PP632Q6XCG6 107 aa7.09□□□□□ -1.27
NIFK-201ENST00000285814 KRTAP9-6A0A140TA67 174 aa7.08□□□□□ -1.28
NIFK-201ENST00000285814 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
NIFK-201ENST00000285814 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
NIFK-201ENST00000285814 KMT2DO14686 5537 aa7.02□□□□□ -1.29
NIFK-201ENST00000285814 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
NIFK-201ENST00000285814 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.3
NIFK-201ENST00000285814 SVIPQ8NHG7 77 aa6.9□□□□□ -1.31
NIFK-201ENST00000285814 KRTAP19-5Q3LI72 72 aa6.85□□□□□ -1.31
NIFK-201ENST00000285814 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
NIFK-201ENST00000285814 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
NIFK-201ENST00000285814 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
NIFK-201ENST00000285814 MT1EP04732 61 aa6.7□□□□□ -1.34
NIFK-201ENST00000285814 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
NIFK-201ENST00000285814 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
NIFK-201ENST00000285814 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
NIFK-201ENST00000285814 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
NIFK-201ENST00000285814 KRTAP6-3Q3LI67 103 aa6.61□□□□□ -1.35
NIFK-201ENST00000285814 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
NIFK-201ENST00000285814 MT1LQ93083 61 aa6.55□□□□□ -1.36
NIFK-201ENST00000285814 KRTAP19-3Q7Z4W3 81 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms