RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 S4R3F8 94 aa6.6□□□□□ -1.35
ACER3-201ENST00000278544 A8MUN3 132 aa6.58□□□□□ -1.36
ACER3-201ENST00000278544 RPS28P62857 69 aaKnown RBP6.57□□□□□ -1.36
ACER3-201ENST00000278544 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
ACER3-201ENST00000278544 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
ACER3-201ENST00000278544 PRR15LQ9BU68 103 aa6.53□□□□□ -1.36
ACER3-201ENST00000278544 M0R2T5 61 aa6.51□□□□□ -1.37
ACER3-201ENST00000278544 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
ACER3-201ENST00000278544 CSAG1Q6PB30 78 aa6.44□□□□□ -1.38
ACER3-201ENST00000278544 A0A1B0GU69 56 aa6.44□□□□□ -1.38
ACER3-201ENST00000278544 LCE2CQ5TA81 110 aa6.43□□□□□ -1.38
ACER3-201ENST00000278544 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
ACER3-201ENST00000278544 SPTSSBQ8NFR3 76 aa6.42□□□□□ -1.38
ACER3-201ENST00000278544 ADM2Q7Z4H4 148 aa6.39□□□□□ -1.39
ACER3-201ENST00000278544 SEC61GP60059 68 aa6.38□□□□□ -1.39
ACER3-201ENST00000278544 Q1T7F1 81 aa6.38□□□□□ -1.39
ACER3-201ENST00000278544 P0C880 135 aa6.38□□□□□ -1.39
ACER3-201ENST00000278544 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
ACER3-201ENST00000278544 Q5VV11 94 aa6.36□□□□□ -1.39
ACER3-201ENST00000278544 MT1HP80294 61 aa6.34□□□□□ -1.39
ACER3-201ENST00000278544 A8MU10 97 aa6.33□□□□□ -1.4
ACER3-201ENST00000278544 A6NED7 52 aa6.32□□□□□ -1.4
ACER3-201ENST00000278544 V9GYY9 64 aa6.32□□□□□ -1.4
ACER3-201ENST00000278544 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
ACER3-201ENST00000278544 LORP23490 312 aaPredicted RBP6.28□□□□□ -1.4
ACER3-201ENST00000278544 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
ACER3-201ENST00000278544 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
ACER3-201ENST00000278544 KRTAP10-6P60371 365 aaPredicted RBP6.27□□□□□ -1.41
ACER3-201ENST00000278544 BRK1Q8WUW1 75 aa6.27□□□□□ -1.41
ACER3-201ENST00000278544 A0A0D9SG42 100 aa6.26□□□□□ -1.41
ACER3-201ENST00000278544 A0A1B0GU33 70 aa6.24□□□□□ -1.41
ACER3-201ENST00000278544 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
ACER3-201ENST00000278544 M0QZ58 72 aa6.17□□□□□ -1.42
ACER3-201ENST00000278544 UQCR11O14957 56 aa6.17□□□□□ -1.42
ACER3-201ENST00000278544 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
ACER3-201ENST00000278544 R4GN34 69 aa6.16□□□□□ -1.42
ACER3-201ENST00000278544 H0YAA0 97 aa6.15□□□□□ -1.43
ACER3-201ENST00000278544 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.43
ACER3-201ENST00000278544 MT1FP04733 61 aa6.1□□□□□ -1.43
ACER3-201ENST00000278544 MT2AP02795 61 aa6.09□□□□□ -1.43
ACER3-201ENST00000278544 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
ACER3-201ENST00000278544 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
ACER3-201ENST00000278544 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
ACER3-201ENST00000278544 LCE2AQ5TA79 106 aaPredicted RBP6.04□□□□□ -1.44
ACER3-201ENST00000278544 USH2AO75445 5202 aa6.03□□□□□ -1.44
ACER3-201ENST00000278544 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
ACER3-201ENST00000278544 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
ACER3-201ENST00000278544 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
ACER3-201ENST00000278544 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
ACER3-201ENST00000278544 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
ACER3-201ENST00000278544 PRO0628Q9UI54 55 aa5.87□□□□□ -1.47
ACER3-201ENST00000278544 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
ACER3-201ENST00000278544 K7ERS5 55 aa5.82□□□□□ -1.48
ACER3-201ENST00000278544 CAMK2N1Q7Z7J9 78 aa5.81□□□□□ -1.48
ACER3-201ENST00000278544 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
ACER3-201ENST00000278544 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
ACER3-201ENST00000278544 LCE2BO14633 110 aa5.78□□□□□ -1.48
ACER3-201ENST00000278544 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
ACER3-201ENST00000278544 MT1BP07438 61 aa5.69□□□□□ -1.5
ACER3-201ENST00000278544 A6NN06 94 aa5.69□□□□□ -1.5
ACER3-201ENST00000278544 PRAC1Q96KF2 57 aa5.65□□□□□ -1.51
ACER3-201ENST00000278544 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
ACER3-201ENST00000278544 SSPOA2VEC9 5147 aa5.61□□□□□ -1.51
ACER3-201ENST00000278544 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
ACER3-201ENST00000278544 ROMO1P60602 79 aa5.58□□□□□ -1.52
ACER3-201ENST00000278544 KMT2DO14686 5537 aa5.57□□□□□ -1.52
ACER3-201ENST00000278544 MT1XP80297 61 aa5.51□□□□□ -1.53
ACER3-201ENST00000278544 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
ACER3-201ENST00000278544 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
ACER3-201ENST00000278544 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
ACER3-201ENST00000278544 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
ACER3-201ENST00000278544 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
ACER3-201ENST00000278544 TNP1P09430 55 aa5.39□□□□□ -1.55
ACER3-201ENST00000278544 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
ACER3-201ENST00000278544 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
ACER3-201ENST00000278544 LCE2DQ5TA82 110 aaPredicted RBP5.37□□□□□ -1.55
ACER3-201ENST00000278544 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
ACER3-201ENST00000278544 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
ACER3-201ENST00000278544 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
ACER3-201ENST00000278544 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
ACER3-201ENST00000278544 KRTAP19-6Q3LI70 58 aa5.25□□□□□ -1.57
ACER3-201ENST00000278544 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
ACER3-201ENST00000278544 CRCT1Q9UGL9 99 aa5.23□□□□□ -1.57
ACER3-201ENST00000278544 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
ACER3-201ENST00000278544 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
ACER3-201ENST00000278544 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
ACER3-201ENST00000278544 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
ACER3-201ENST00000278544 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
ACER3-201ENST00000278544 PP632Q6XCG6 107 aa5.01□□□□□ -1.61
ACER3-201ENST00000278544 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
ACER3-201ENST00000278544 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
ACER3-201ENST00000278544 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
ACER3-201ENST00000278544 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
ACER3-201ENST00000278544 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
ACER3-201ENST00000278544 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.62
ACER3-201ENST00000278544 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
ACER3-201ENST00000278544 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
ACER3-201ENST00000278544 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
ACER3-201ENST00000278544 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
ACER3-201ENST00000278544 MT1EP04732 61 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms